FFCP PHASE1:Mm9::chr7:148265683..148265705,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:148265683..148265705,+
|short_description=p2@Pkp3
|description=CAGE_peak_2_at_Pkp3_5end
|association_with_transcript=4bp_to_ENSMUST00000160869_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56460 | |EntrezGene=56460 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1297 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYP0 | |UniProt=E0CYP0 | ||
|association_with_transcript=4bp_to_ENSMUST00000160869_5end | |||
|cluster_id=chr7:148265683..148265705,+ | |||
|description=CAGE_peak_2_at_Pkp3_5end | |||
|id=chr7:148265683..148265705,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.98e-07!9;CL:0002251!1.98e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.20e-09,9;CL:0002251,1.20e-09,9;CL:0002076,1.29e-08,15;CL:0000239,1.20e-07,6;CL:0000677,1.20e-07,6;CL:0000584,1.20e-07,6;CL:0000066,8.13e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.55e-19!43;UBERON:0005409!1.16e-18!59;UBERON:0004119!1.39e-13!130;UBERON:0000925!1.39e-13!130;UBERON:0006595!1.39e-13!130;UBERON:0001007!8.64e-13!128;UBERON:0001555!8.64e-13!128;UBERON:0007026!8.64e-13!128;UBERON:0004921!9.64e-12!126;UBERON:0004185!9.64e-12!126;UBERON:0000344!1.06e-11!15;UBERON:0001242!2.72e-10!13;UBERON:0000060!2.72e-10!13;UBERON:0001262!2.72e-10!13;UBERON:0004786!2.72e-10!13;UBERON:0004923!5.81e-08!24;UBERON:0003350!1.98e-07!9;UBERON:0004808!1.98e-07!9;UBERON:0001277!1.98e-07!9;UBERON:0000485!4.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.84e-23,47;UBERON:0000160,8.69e-23,31;UBERON:0000344,1.61e-15,15;UBERON:0001242,1.40e-13,13;UBERON:0001262,1.40e-13,13;UBERON:0004786,1.40e-13,13;UBERON:0004923,3.81e-11,24;UBERON:0004119,9.09e-11,118;UBERON:0000925,9.09e-11,118;UBERON:0006595,9.09e-11,118;UBERON:0001007,6.36e-10,116;UBERON:0001555,6.36e-10,116;UBERON:0007026,6.36e-10,116;UBERON:0003350,1.20e-09,9;UBERON:0004808,1.20e-09,9;UBERON:0001277,1.20e-09,9;UBERON:0004921,7.96e-09,114;UBERON:0000485,2.38e-07,11;UBERON:0007023,5.59e-07,51 | |||
|phase1_expression=0.640595388419176,78.1704913112169,70.9798813447676,34.7833843002855,53.5958431042592,20.4812711732506,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,19.679068003589,26.6114766037917,51.6808767703518,40.060865642794,28.6576739472232,27.7434192406306,28.4794046628722,23.0599731081517,0,0,0,4.62162591602039,7.48055904113216,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,2.38755514223978,0,0,0,0.563373679106722,0,0,0,7.79367747640371,6.08063677140237,6.57181778519218,3.53970027129086,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,7.45567044872489,0,0,15.0719662573069,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.622034853050465,1.0108910337347,1.68353484709179,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.340182495756639,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,1.53437012699302,3.89266148915837,3.83077383174383,5.96768195583036,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,10.3135720998782,0,0.232236671860439,1.15980715189884,2.42020229548011,2.66853652613844,4.1849637744763,17.0830462156024,6.58795818896044,5.27803938480566,4.77495532898762,6.43381487493096,7.19055526923377,8.21324589523838,10.1562049359727,0,0.342745537829186,2.25415471346161,1.01825663922657,0,0.49095073923223,1.58091342810643,1.03327103585722,2.04098346193787,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,0,0.469380496577004,0.335012514883631,0.476087281772027,1.17080188714679,0.157635144106191,0,0.797273843287435,1.96635977658886,0.863424909329478,0.723245292907558,0,0,5.4094070032094,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,1.15479086080775,2.65490276679926,0.971122544619926,0.906970670894253,0.754420319023592,1.77181135728464,0.307435147943927,3.6179961043551,1.81766864738753,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.129358683782755,1.07168517515796,0.709360934569094,0.713475270408282,0.164549020602121,1.2178597964584,4.69343416127421,2.33015277950202,1.32317038832977,11.2122652000206,6.94297034792394,10.072258463002,24.5907028646461,26.4266848589549,10.4933101186746,0,0,0.412773735926445,0,0,0,0,0,0,0,8.59203556213602,0,1.01659733563424,3.56417624711944,8.15444354456428,7.42432716737004,5.25970950900801,4.21532624199213,12.3025292732494,9.20266310371729,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,1.41907650703115,1.43795340030758,1.29920822977795,0.895133478337407,0.993406773906324,1.56254084375959,0.590758108698309,0.403865799792591,0.304827226619999,0.705783295957884,0.38983152295901,0.673482891482306,0.233753804363138,19.7255433745234,3.55177525398503,0.358855426437903,5.70807695637867,1.54551675225752,2.064507229963,2.93042598827624,37.7288347179156,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.972426868273176,0.209613162627982,1.10306105070008,0,0.412070114477788,0.962757628775446,1.51618327058278,0.760437899670719,1.50901073108861,0.936415074698824,0.89635213366817,0.631790158511746,1.42888107384922,0.695305955669133,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,1.1921809497366,0.726732083161643,0.846984423737976,1.01537529470012,0.548783918618318,0.263069711437843,1.35804113845862,1.68342681497322,0.830445126869219,1.37906275325789,0.409231043169689,0.619747364743864,2.3148793317737,1.74867404556562,1.87145286756327,2.36358159453128,0.765153328275374,2.42650561031467,0.463735671240843 | |phase1_expression=0.640595388419176,78.1704913112169,70.9798813447676,34.7833843002855,53.5958431042592,20.4812711732506,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,19.679068003589,26.6114766037917,51.6808767703518,40.060865642794,28.6576739472232,27.7434192406306,28.4794046628722,23.0599731081517,0,0,0,4.62162591602039,7.48055904113216,5.9209113316087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,2.38755514223978,0,0,0,0.563373679106722,0,0,0,7.79367747640371,6.08063677140237,6.57181778519218,3.53970027129086,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,7.45567044872489,0,0,15.0719662573069,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.622034853050465,1.0108910337347,1.68353484709179,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.340182495756639,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,1.53437012699302,3.89266148915837,3.83077383174383,5.96768195583036,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1380584599145,10.3135720998782,0,0.232236671860439,1.15980715189884,2.42020229548011,2.66853652613844,4.1849637744763,17.0830462156024,6.58795818896044,5.27803938480566,4.77495532898762,6.43381487493096,7.19055526923377,8.21324589523838,10.1562049359727,0,0.342745537829186,2.25415471346161,1.01825663922657,0,0.49095073923223,1.58091342810643,1.03327103585722,2.04098346193787,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,0,0.469380496577004,0.335012514883631,0.476087281772027,1.17080188714679,0.157635144106191,0,0.797273843287435,1.96635977658886,0.863424909329478,0.723245292907558,0,0,5.4094070032094,2.48343071674259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,1.15479086080775,2.65490276679926,0.971122544619926,0.906970670894253,0.754420319023592,1.77181135728464,0.307435147943927,3.6179961043551,1.81766864738753,0.356497378384721,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0.36012218806262,0.129358683782755,1.07168517515796,0.709360934569094,0.713475270408282,0.164549020602121,1.2178597964584,4.69343416127421,2.33015277950202,1.32317038832977,11.2122652000206,6.94297034792394,10.072258463002,24.5907028646461,26.4266848589549,10.4933101186746,0,0,0.412773735926445,0,0,0,0,0,0,0,8.59203556213602,0,1.01659733563424,3.56417624711944,8.15444354456428,7.42432716737004,5.25970950900801,4.21532624199213,12.3025292732494,9.20266310371729,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,1.41907650703115,1.43795340030758,1.29920822977795,0.895133478337407,0.993406773906324,1.56254084375959,0.590758108698309,0.403865799792591,0.304827226619999,0.705783295957884,0.38983152295901,0.673482891482306,0.233753804363138,19.7255433745234,3.55177525398503,0.358855426437903,5.70807695637867,1.54551675225752,2.064507229963,2.93042598827624,37.7288347179156,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.972426868273176,0.209613162627982,1.10306105070008,0,0.412070114477788,0.962757628775446,1.51618327058278,0.760437899670719,1.50901073108861,0.936415074698824,0.89635213366817,0.631790158511746,1.42888107384922,0.695305955669133,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.354951612318675,1.1921809497366,0.726732083161643,0.846984423737976,1.01537529470012,0.548783918618318,0.263069711437843,1.35804113845862,1.68342681497322,0.830445126869219,1.37906275325789,0.409231043169689,0.619747364743864,2.3148793317737,1.74867404556562,1.87145286756327,2.36358159453128,0.765153328275374,2.42650561031467,0.463735671240843 | ||
|short_description=p2@Pkp3 | |||
}} | }} |
Latest revision as of 03:27, 26 September 2015
Short description: | p2@Pkp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pkp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1297 |
Association with transcript: | 4bp_to_ENSMUST00000160869_5end |
EntrezGene: | Pkp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.20e-09 | 9 |
epithelial cell of alimentary canal | 1.20e-09 | 9 |
endo-epithelial cell | 1.29e-08 | 15 |
brush border epithelial cell | 1.20e-07 | 6 |
gut absorptive cell | 1.20e-07 | 6 |
enterocyte | 1.20e-07 | 6 |
epithelial cell | 8.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.84e-23 | 47 |
intestine | 8.69e-23 | 31 |
mucosa | 1.61e-15 | 15 |
intestinal mucosa | 1.40e-13 | 13 |
wall of intestine | 1.40e-13 | 13 |
gastrointestinal system mucosa | 1.40e-13 | 13 |
organ component layer | 3.81e-11 | 24 |
endoderm-derived structure | 9.09e-11 | 118 |
endoderm | 9.09e-11 | 118 |
presumptive endoderm | 9.09e-11 | 118 |
digestive system | 6.36e-10 | 116 |
digestive tract | 6.36e-10 | 116 |
primitive gut | 6.36e-10 | 116 |
epithelium of mucosa | 1.20e-09 | 9 |
gastrointestinal system epithelium | 1.20e-09 | 9 |
intestinal epithelium | 1.20e-09 | 9 |
subdivision of digestive tract | 7.96e-09 | 114 |
simple columnar epithelium | 2.38e-07 | 11 |
adult organism | 5.59e-07 | 51 |