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FFCP PHASE1:Mm9::chr10:60552075..60552093,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13180
|EntrezGene=13180
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P61458
|UniProt=P61458
|association_with_transcript=0bp_to_ENSMUST00000020298,NM_025273,uc007ffj.2_5end
|association_with_transcript=0bp_to_ENSMUST00000020298,NM_025273,uc007ffj.2_5end
|cluster_id=chr10:60552075..60552093,+
|description=CAGE_peak_2_at_Pcbd1_5end
|description=CAGE_peak_2_at_Pcbd1_5end
|id=chr10:60552075..60552093,+
|id=chr10:60552075..60552093,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!8.74e-15!43;UBERON:0005177!6.83e-14!85;UBERON:0002107!2.43e-12!22;UBERON:0007499!2.43e-12!22;UBERON:0006925!2.43e-12!22;UBERON:0009497!2.43e-12!22;UBERON:0000015!2.43e-12!22;UBERON:0002423!2.43e-12!22;UBERON:0006235!2.43e-12!22;UBERON:0008835!2.43e-12!22;UBERON:0003894!2.43e-12!22;UBERON:0004161!2.43e-12!22;UBERON:0008836!2.43e-12!22;UBERON:0009854!3.56e-12!23;UBERON:0009856!3.56e-12!23;UBERON:0005409!5.28e-12!59;UBERON:0002100!2.38e-10!98;UBERON:0005172!1.59e-09!49;UBERON:0005173!1.59e-09!49;UBERON:0002417!1.59e-09!49;UBERON:0000916!1.59e-09!49;UBERON:0002365!7.59e-09!25;UBERON:0002330!7.59e-09!25;UBERON:0002108!7.84e-09!16;UBERON:0009569!9.82e-08!66;UBERON:0001007!1.11e-07!128;UBERON:0001555!1.11e-07!128;UBERON:0007026!1.11e-07!128;UBERON:0001264!1.16e-07!12;UBERON:0003922!1.16e-07!12;UBERON:0002114!1.16e-07!12;UBERON:0003923!1.16e-07!12;UBERON:0003924!1.16e-07!12;UBERON:0003921!1.16e-07!12;UBERON:0004119!1.48e-07!130;UBERON:0000925!1.48e-07!130;UBERON:0006595!1.48e-07!130;UBERON:0001045!1.78e-07!13;UBERON:0004921!3.92e-07!126;UBERON:0004185!3.92e-07!126;UBERON:0003914!9.04e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.18e-12,79;UBERON:0002107,1.58e-12,22;UBERON:0007499,1.58e-12,22;UBERON:0006925,1.58e-12,22;UBERON:0009497,1.58e-12,22;UBERON:0000015,1.58e-12,22;UBERON:0002423,1.58e-12,22;UBERON:0006235,1.58e-12,22;UBERON:0008835,1.58e-12,22;UBERON:0003894,1.58e-12,22;UBERON:0004161,1.58e-12,22;UBERON:0008836,1.58e-12,22;UBERON:0009854,2.33e-12,23;UBERON:0009856,2.33e-12,23;UBERON:0005172,2.92e-09,49;UBERON:0005173,2.92e-09,49;UBERON:0002417,2.92e-09,49;UBERON:0000916,2.92e-09,49;UBERON:0002365,3.79e-09,25;UBERON:0002330,3.79e-09,25;UBERON:0002100,5.60e-09,90;UBERON:0000160,9.31e-09,31;UBERON:0001264,9.04e-08,12;UBERON:0009569,1.58e-07,66;UBERON:0003914,7.02e-07,47
|phase1_expression=4.48416771893423,6.97950815278722,4.09499315450582,5.14189159221611,3.00537437967808,9.23335995515394,7.94282978024787,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.48380953329414,0,0,7.99962113967033,8.25873411841812,13.2073351746455,12.0613358924541,9.48073423817912,6.27077284206034,7.30887376303799,9.97787297948871,0,0,0,14.1537293678125,13.9637102101134,13.8835162258411,0,0.7813353445238,0,0,0,0,2.64383317748712,3.34543873024398,1.83546752161682,1.56478268869608,11.9913836009246,6.37089929929968,4.08302788055995,6.29938897314131,10.062679505548,0,0,0,0,1.14613375975503,0,5.05791152148994,2.64495489636016,4.43681982454325,1.0165335962074,0.889294796111139,0,0,0,4.79360176829448,5.76327457982332,1.24427534770173,0.675029691658453,1.68259969081106,9.71213346972932,4.8591079009355,1.46988959057945,2.01275489138296,0,9.91042928994498,5.10749352340751,6.45147439676223,5.93488294785872,4.20843160571084,5.2091337055676,10.3297709630511,16.8828783009504,9.16789486660861,5.30331453852602,4.6982654663704,4.10078780815661,0.151452386666368,0.151143120213571,6.66688324013859,55.9275520037901,48.2779646932503,54.5100223554195,50.6825605609182,53.3151995645829,20.364440919104,0,0,0,4.50698943285378,0,0,0,5.62876706629157,4.81383744402687,6.0662933401774,24.0927986207217,0,3.41416919849097,2.4287945747259,2.74018930480927,2.99800146432876,3.91878865436819,1.99900802130698,2.26199864393416,10.6293836125781,0,0,0.485300549842228,0,0,3.72783522436244,1.17112318804619,1.25668024088073,8.17462576667492,1.07833612055328,2.39961092397363,1.27070227073065,6.14141621559773,2.28750301409313,2.01046963380583,1.04294592115366,0.255715457330331,5.40248915854856,4.05603157669394,3.1570202793598,2.48813941220186,13.1415834385511,1.47309299120532,0.780722657776222,2.06911893990126,1.98068342785884,2.86339153887859,2.24520447199382,1.5373646434182,2.71735001223214,1.55222022443409,1.29340795759705,1.32374256117473,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,0.411564272815887,2.58744546864041,1.40442637462647,1.28673953557358,1.98914449576915,3.10688658803253,3.98694301967864,5.58192390529146,5.44512891845984,6.49321964766433,5.55361606394562,8.37122201101468,3.75582761959467,4.78737903705395,4.44311594766397,1.14917224855367,1.21603214318784,0.584799949701329,0.219550115291051,0.402619256281115,1.26173969138476,1.02904612379284,5.61711931072457,5.28901133327089,3.41261200856374,5.80591679651096,4.63922860759536,5.84882221407693,8.89512175379481,8.17970192284004,3.79623249235609,8.72904460037258,6.53471542880701,6.56556357735798,4.09424582950152,3.59527763461689,6.91641759599022,6.37252074413975,3.22435431620239,5.02693455482807,4.50830942692322,6.10953983535943,6.40043207653165,8.48643420672855,17.0106284864252,20.6654207171443,28.4167697392888,29.7387165051539,34.6849573691964,3.50374722003798,5.70021085828289,4.94696647246678,6.08580364165509,11.8176808278684,13.2405442926338,12.6586300478357,17.9970101720289,40.0859663254599,15.814502718009,37.5862357145188,42.4371235435802,44.9590402745859,52.3840447483984,37.1481511449793,1.66277871149944,2.65287976478679,2.44447464663039,3.05541154395339,3.75504397261603,3.51763140627813,3.09456733151818,1.56106918286239,2.04925687338048,1.55025282754142,1.59454768657487,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0.275936746304732,4.49541651965817,3.8679856575427,0,0.757412781613119,3.15508219416257,2.34263246577983,2.80050417052639,1.43381278771531,2.22798674082394,3.11384183867716,0.809621403349789,3.50707029493574,2.37172666767914,0.321321316421807,2.2710413633323,2.31485284767432,1.30309567482861,1.64970122972535,19.9117707509944,7.28341908464944,12.09294227859,16.9744571780308,14.1744908582771,11.3751004739253,10.3371317267288,14.5413491791002,16.7553767840819,17.3820216864699,27.4088382294997,50.5364161916116,10.2131881726136,1.98067203434441,3.23396709456886,3.00071849044229,1.24138163549592,1.42695054081656,1.31639216481697,0.913394847343798,0.938686832254841,3.81297727554876,3.52845436887939,1.48397627647332,0.645857706783622,0.361877549568935,0.358117032009409,1.14898629821543,6.12109756922687,2.59595422814714,0.170870880797853,1.03193433981611,0.925972636848558,0.565105371014073,0.136694227721025,0.228778173206523,3.39956859987711,3.77868921273877,3.17859939750175,11.4560474161814,2.53068794864908,4.87966721104437,3.78018692876304,2.71814784818809,6.11415178489297,4.18079473792944,6.77758336947755,6.54389854960074,3.6292192521702,0,0.56369293868419,0.747582730219894,1.32366792365678,0.194451188344048,1.42075805825504,1.520605129417,1.76035857968631,2.8644964665669,0.734015410979976,0,0.288030006257865,0,1.21635129174099,0.410843828659309,0.389762468933385,0.358053391334963,0.39736270956253,0,0.443068581523732,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0,0.443971906748129,0,0.839423081820392,2.70465431645067,2.81523713176773,0.915758121336325,0.428736758158132,3.00943262421218,0.564751842617067,3.2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|phase1_expression=4.48416771893423,6.97950815278722,4.09499315450582,5.14189159221611,3.00537437967808,9.23335995515394,7.94282978024787,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.48380953329414,0,0,7.99962113967033,8.25873411841812,13.2073351746455,12.0613358924541,9.48073423817912,6.27077284206034,7.30887376303799,9.97787297948871,0,0,0,14.1537293678125,13.9637102101134,13.8835162258411,0,0.7813353445238,0,0,0,0,2.64383317748712,3.34543873024398,1.83546752161682,1.56478268869608,11.9913836009246,6.37089929929968,4.08302788055995,6.29938897314131,10.062679505548,0,0,0,0,1.14613375975503,0,5.05791152148994,2.64495489636016,4.43681982454325,1.0165335962074,0.889294796111139,0,0,0,4.79360176829448,5.76327457982332,1.24427534770173,0.675029691658453,1.68259969081106,9.71213346972932,4.8591079009355,1.46988959057945,2.01275489138296,0,9.91042928994498,5.10749352340751,6.45147439676223,5.93488294785872,4.20843160571084,5.2091337055676,10.3297709630511,16.8828783009504,9.16789486660861,5.30331453852602,4.6982654663704,4.10078780815661,0.151452386666368,0.151143120213571,6.66688324013859,55.9275520037901,48.2779646932503,54.5100223554195,50.6825605609182,53.3151995645829,20.364440919104,0,0,0,4.50698943285378,0,0,0,5.62876706629157,4.81383744402687,6.0662933401774,24.0927986207217,0,3.41416919849097,2.4287945747259,2.74018930480927,2.99800146432876,3.91878865436819,1.99900802130698,2.26199864393416,10.6293836125781,0,0,0.485300549842228,0,0,3.72783522436244,1.17112318804619,1.25668024088073,8.17462576667492,1.07833612055328,2.39961092397363,1.27070227073065,6.14141621559773,2.28750301409313,2.01046963380583,1.04294592115366,0.255715457330331,5.40248915854856,4.05603157669394,3.1570202793598,2.48813941220186,13.1415834385511,1.47309299120532,0.780722657776222,2.06911893990126,1.98068342785884,2.86339153887859,2.24520447199382,1.5373646434182,2.71735001223214,1.55222022443409,1.29340795759705,1.32374256117473,0.527853372491847,1.31517439456545,1.11218899690239,0.696504333044333,0.411564272815887,2.58744546864041,1.40442637462647,1.28673953557358,1.98914449576915,3.10688658803253,3.98694301967864,5.58192390529146,5.44512891845984,6.49321964766433,5.55361606394562,8.37122201101468,3.75582761959467,4.78737903705395,4.44311594766397,1.14917224855367,1.21603214318784,0.584799949701329,0.219550115291051,0.402619256281115,1.26173969138476,1.02904612379284,5.61711931072457,5.28901133327089,3.41261200856374,5.80591679651096,4.63922860759536,5.84882221407693,8.89512175379481,8.17970192284004,3.79623249235609,8.72904460037258,6.53471542880701,6.56556357735798,4.09424582950152,3.59527763461689,6.91641759599022,6.37252074413975,3.22435431620239,5.02693455482807,4.50830942692322,6.10953983535943,6.40043207653165,8.48643420672855,17.0106284864252,20.6654207171443,28.4167697392888,29.7387165051539,34.6849573691964,3.50374722003798,5.70021085828289,4.94696647246678,6.08580364165509,11.8176808278684,13.2405442926338,12.6586300478357,17.9970101720289,40.0859663254599,15.814502718009,37.5862357145188,42.4371235435802,44.9590402745859,52.3840447483984,37.1481511449793,1.66277871149944,2.65287976478679,2.44447464663039,3.05541154395339,3.75504397261603,3.51763140627813,3.09456733151818,1.56106918286239,2.04925687338048,1.55025282754142,1.59454768657487,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0.275936746304732,4.49541651965817,3.8679856575427,0,0.757412781613119,3.15508219416257,2.34263246577983,2.80050417052639,1.43381278771531,2.22798674082394,3.11384183867716,0.809621403349789,3.50707029493574,2.37172666767914,0.321321316421807,2.2710413633323,2.31485284767432,1.30309567482861,1.64970122972535,19.9117707509944,7.28341908464944,12.09294227859,16.9744571780308,14.1744908582771,11.3751004739253,10.3371317267288,14.5413491791002,16.7553767840819,17.3820216864699,27.4088382294997,50.5364161916116,10.2131881726136,1.98067203434441,3.23396709456886,3.00071849044229,1.24138163549592,1.42695054081656,1.31639216481697,0.913394847343798,0.938686832254841,3.81297727554876,3.52845436887939,1.48397627647332,0.645857706783622,0.361877549568935,0.358117032009409,1.14898629821543,6.12109756922687,2.59595422814714,0.170870880797853,1.03193433981611,0.925972636848558,0.565105371014073,0.136694227721025,0.228778173206523,3.39956859987711,3.77868921273877,3.17859939750175,11.4560474161814,2.53068794864908,4.87966721104437,3.78018692876304,2.71814784818809,6.11415178489297,4.18079473792944,6.77758336947755,6.54389854960074,3.6292192521702,0,0.56369293868419,0.747582730219894,1.32366792365678,0.194451188344048,1.42075805825504,1.520605129417,1.76035857968631,2.8644964665669,0.734015410979976,0,0.288030006257865,0,1.21635129174099,0.410843828659309,0.389762468933385,0.358053391334963,0.39736270956253,0,0.443068581523732,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0,0.443971906748129,0,0.839423081820392,2.70465431645067,2.81523713176773,0.915758121336325,0.428736758158132,3.00943262421218,0.564751842617067,3.2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|short_description=p2@Pcbd1
|short_description=p2@Pcbd1
}}
}}

Latest revision as of 03:53, 26 September 2015

Short description:p2@Pcbd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pcbd1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000020298, NM_025273, uc007ffj.2_5end
EntrezGene:Pcbd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pcbd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.26
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F755.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C448.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C854.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F450.68
Mouse hepatocyte, donor8.CNhs13091.11824-124F653.32
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.09
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B213.14
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G78.49
kidney, neonate N10.CNhs11206.758-6D517.01
kidney, neonate N20.CNhs11113.832-19I120.67
kidney, neonate N25.CNhs11122.1353-25F328.42
kidney, neonate N30.CNhs11203.1385-42H129.74
liver, adult pregnant day01.CNhs10466.508-5B234.68
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A313.24
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F418.00
liver, neonate N03.CNhs11123.1345-25G240.09
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H237.59
liver, neonate N10.CNhs11115.751-24B942.44
liver, neonate N20.CNhs11220.823-25A344.96
liver, neonate N25.CNhs11198.1368-26H152.38
liver, neonate N30.CNhs11106.1382-42D137.15
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H550.54
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A96.78
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.18e-1279
liver1.58e-1222
epithelial sac1.58e-1222
digestive gland1.58e-1222
epithelium of foregut-midgut junction1.58e-1222
anatomical boundary1.58e-1222
hepatobiliary system1.58e-1222
foregut-midgut junction1.58e-1222
hepatic diverticulum1.58e-1222
liver primordium1.58e-1222
septum transversum1.58e-1222
liver bud1.58e-1222
digestive tract diverticulum2.33e-1223
sac2.33e-1223
abdomen element2.92e-0949
abdominal segment element2.92e-0949
abdominal segment of trunk2.92e-0949
abdomen2.92e-0949
exocrine gland3.79e-0925
exocrine system3.79e-0925
trunk5.60e-0990
intestine9.31e-0931
pancreas9.04e-0812
subdivision of trunk1.58e-0766
epithelial tube7.02e-0747
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