FFCP PHASE1:Mm9::chr14:56407596..56407630,-: Difference between revisions
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{{FFCP|EntrezGene=56532|HGNC=|MCL_coexpression_id=167|UniProt=G3X8V8,E9PZP3,Q8K2Y2|association_with_transcript=63bp_to_ENSMUST00000022830,ENSMUST00000168716,NM_001164107,NM_001164108,NM_019955,uc007uav.2,uc007uaw.2,uc011zlp.1_5end|description=CAGE_peak_3_at_Ripk3_5end|id=chr14:56407596..56407630,-|ontology_enrichment_celltype=CL:0000063!2.28e-08!66;CL:0000219!3.17e-07!54;CL:0002320!3.97e-07!46;CL:0000134!3.97e-07!46|ontology_enrichment_celltype_v019_2=CL:0002320,1.84e-14,46;CL:0000134,1.84e-14,46;CL:0000219,8.65e-14,54;CL:0000034,3.76e-08,97;CL:0000988,2.30e-07,32;CL:0002032,2.30e-07,32;CL:0000037,2.30e-07,32;CL:0000837,2.30e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.97e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.84e-14,46;UBERON:0000344,6.12e-07,15|phase1_expression=0.160148847104794,3.48975407639361,2.72999543633722,0.90739263392049,0.500895729946347,1.00727563147134,1.63528848416868,1.29123323441576,1.83025338797167,1.17032263160997,0.171217968225505,0.0797721589953364,0.342401459862411,0.874204024189974,0,0.404950534779652,0,1.10411757875383,1.91960207048034,0.84877930359606,0,3.07801948722744,1.04479915655574,2.55987876469451,5.27641346454491,1.14846392823004,3.4460959692726,2.58565479223067,1.14014051673824,3.2763916868791,3.99114919179548,0,0.61506478758457,0,0.288851619751275,0.831173226792462,0.612508068787107,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,2.01434908760924,1.52065396829272,2.20256102594018,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,1.67983705950435,2.87505128729943,1.34226084846189,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,1.69422266034566,1.77858959222228,1.3498495759221,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.302286240427142,1.44932244350839,1.72084775396277,0,0,0,0,0.140444420131752,1.87473354835864,2.33807404142582,3.18005617059306,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0.647067399789637,0.883366073841574,0,0,0,0,0.510914110417183,5.63131085177825,4.79922184794726,3.43089613097275,0,0,0.125654352112864,0,0,0,0,0.916554274652847,0.622034853050465,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.527853372491847,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,5.61770549850588,3.08817488537658,3.12579849335152,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,0.232533944750408,0,0.233530684734339,0.329119699826961,1.14917224855367,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,1.05780226665418,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.949058123089023,1.31759163779209,0.251335208800269,1.39269530428806,0.58489226135736,1.79763881730844,0.648414149624083,0.995706366271836,0.948339504765408,1.02823661348756,1.1270773567308,0,0.581857461502877,0.210407459670956,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,1.01847051465113,0.938760993154008,0.167506257441816,0.714130922658041,0.390267295715598,0.157635144106191,0,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0.177340233642274,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0.301564624640779,0,0,1.1659233465194,0,0.683483523191411,1.03193433981611,0.370389054739423,0,0.546776910884101,0,7.81900777971734,9.79660166265606,6.08079884739465,0,0.632671987162271,0.406638934253697,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0.598066184175915,0.165458490457098,0.583353565032143,0.645799117388655,0.337912250981556,0.352071715937262,0.39061315453185,0.104859344425711,0,0.288030006257865,0.948033361884535,1.82452693761148,1.23253148597793,1.42912905275575,0.895133478337407,0.39736270956253,0.721172697119813,0.738447635872886,0.605798699688886,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56532 | |||
|HGNC= | |||
|MCL_coexpression_id=167 | |||
|TSSclassifier=NA | |||
|UniProt=G3X8V8,E9PZP3,Q8K2Y2 | |||
|association_with_transcript=63bp_to_ENSMUST00000022830,ENSMUST00000168716,NM_001164107,NM_001164108,NM_019955,uc007uav.2,uc007uaw.2,uc011zlp.1_5end | |||
|cluster_id=chr14:56407596..56407630,- | |||
|description=CAGE_peak_3_at_Ripk3_5end | |||
|id=chr14:56407596..56407630,- | |||
|ontology_enrichment_celltype=CL:0000063!2.28e-08!66;CL:0000219!3.17e-07!54;CL:0002320!3.97e-07!46;CL:0000134!3.97e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.84e-14,46;CL:0000134,1.84e-14,46;CL:0000219,8.65e-14,54;CL:0000034,3.76e-08,97;CL:0000988,2.30e-07,32;CL:0002032,2.30e-07,32;CL:0000037,2.30e-07,32;CL:0000837,2.30e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.97e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.84e-14,46;UBERON:0000344,6.12e-07,15 | |||
|phase1_expression=0.160148847104794,3.48975407639361,2.72999543633722,0.90739263392049,0.500895729946347,1.00727563147134,1.63528848416868,1.29123323441576,1.83025338797167,1.17032263160997,0.171217968225505,0.0797721589953364,0.342401459862411,0.874204024189974,0,0.404950534779652,0,1.10411757875383,1.91960207048034,0.84877930359606,0,3.07801948722744,1.04479915655574,2.55987876469451,5.27641346454491,1.14846392823004,3.4460959692726,2.58565479223067,1.14014051673824,3.2763916868791,3.99114919179548,0,0.61506478758457,0,0.288851619751275,0.831173226792462,0.612508068787107,0,1.5626706890476,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,2.01434908760924,1.52065396829272,2.20256102594018,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,1.67983705950435,2.87505128729943,1.34226084846189,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,0.202316460859598,0,0,1.69422266034566,1.77858959222228,1.3498495759221,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0.302286240427142,1.44932244350839,1.72084775396277,0,0,0,0,0.140444420131752,1.87473354835864,2.33807404142582,3.18005617059306,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.251333182659351,0,0,0,0.647067399789637,0.883366073841574,0,0,0,0,0.510914110417183,5.63131085177825,4.79922184794726,3.43089613097275,0,0,0.125654352112864,0,0,0,0,0.916554274652847,0.622034853050465,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.30140963567143,0.136072998302656,0,0.0937017245597288,0.258703370739016,0.431135985865684,0,0.527853372491847,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,5.61770549850588,3.08817488537658,3.12579849335152,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0.590292695242212,0.617068451549513,0.232533944750408,0,0.233530684734339,0.329119699826961,1.14917224855367,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,1.05780226665418,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.949058123089023,1.31759163779209,0.251335208800269,1.39269530428806,0.58489226135736,1.79763881730844,0.648414149624083,0.995706366271836,0.948339504765408,1.02823661348756,1.1270773567308,0,0.581857461502877,0.210407459670956,0.316182685621286,0.147610147979602,0.156998727841375,0,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0.184753190166605,0.568474235311454,0.814824882210129,1.01847051465113,0.938760993154008,0.167506257441816,0.714130922658041,0.390267295715598,0.157635144106191,0,0.797273843287435,0.491589944147214,0.172684981865896,0.578596234326046,0,2.71952841909355,0,0.275936746304732,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,0.565815239267694,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.388076051348264,0.857348140126369,0.177340233642274,0.178368817602071,0.658196082408484,0.608929898229199,0,0,0,0.16488625294148,0.322928853391811,0.301564624640779,0,0,1.1659233465194,0,0.683483523191411,1.03193433981611,0.370389054739423,0,0.546776910884101,0,7.81900777971734,9.79660166265606,6.08079884739465,0,0.632671987162271,0.406638934253697,0.324016022465404,0,0,0.539457385539283,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0.598066184175915,0.165458490457098,0.583353565032143,0.645799117388655,0.337912250981556,0.352071715937262,0.39061315453185,0.104859344425711,0,0.288030006257865,0.948033361884535,1.82452693761148,1.23253148597793,1.42912905275575,0.895133478337407,0.39736270956253,0.721172697119813,0.738447635872886,0.605798699688886,0.533447646584999,0.504130925684203,0.38983152295901,0.769694733122636,0.467507608726276,0,0,0,0,0.386379188064381,0.93841237725591,0.36630324853453,0.214368379079066,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.972426868273176,0.419226325255965,0.183843508450014,1.11123363900808,0.824140228955577,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.187283014939765,0.384150914429216,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.564656282491984,0.423073039458382,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.492522411877817,0,0.154936841185966,0.578719832943424,0.249810577937946,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Ripk3 | |||
}} |
Latest revision as of 04:01, 26 September 2015
Short description: | p3@Ripk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ripk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:167 |
Association with transcript: | 63bp_to_ENSMUST00000022830, ENSMUST00000168716, NM_001164107, NM_001164108, NM_019955, uc007uav.2, uc007uaw.2, uc011zlp.1_5end |
EntrezGene: | Ripk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.84e-14 | 46 |
mesenchymal cell | 1.84e-14 | 46 |
motile cell | 8.65e-14 | 54 |
stem cell | 3.76e-08 | 97 |
hematopoietic cell | 2.30e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.30e-07 | 32 |
hematopoietic stem cell | 2.30e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.30e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.84e-14 | 46 |
mucosa | 6.12e-07 | 15 |