FFCP PHASE1:Mm9::chr7:18830551..18830565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=266815 | |EntrezGene=266815 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt=Q8HWE7,Q8HWA5 | |UniProt=Q8HWE7,Q8HWA5 | ||
|association_with_transcript=-130bp_to_ENSMUST00000066780,NM_153749,uc009fjh.1_5end | |association_with_transcript=-130bp_to_ENSMUST00000066780,NM_153749,uc009fjh.1_5end | ||
|cluster_id=chr7:18830551..18830565,+ | |||
|description=CAGE_peak_1_at_Mill1_5end | |description=CAGE_peak_1_at_Mill1_5end | ||
|id=chr7:18830551..18830565,+ | |id=chr7:18830551..18830565,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.01e-09!6;CL:0000677!2.01e-09!6;CL:0000212!2.01e-09!6;CL:0000584!2.01e-09!6;CL:0000075!5.28e-08!7;CL:0000473!1.09e-07!3;CL:0000627!1.09e-07!3;CL:0000682!1.09e-07!3 | |ontology_enrichment_celltype=CL:0000239!2.01e-09!6;CL:0000677!2.01e-09!6;CL:0000212!2.01e-09!6;CL:0000584!2.01e-09!6;CL:0000075!5.28e-08!7;CL:0000473!1.09e-07!3;CL:0000627!1.09e-07!3;CL:0000682!1.09e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.95e-17,3;CL:0000239,6.55e-15,6;CL:0000677,6.55e-15,6;CL:0000584,6.55e-15,6;CL:0000075,8.10e-13,7;CL:0000066,3.30e-10,25;CL:0002563,5.09e-10,9;CL:0002251,5.09e-10,9;CL:0000473,1.05e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!8.14e-12!5;UBERON:0001003!8.14e-12!5;UBERON:0002097!8.14e-12!5;UBERON:0002199!8.14e-12!5;UBERON:0007029!8.14e-12!5;UBERON:0007376!8.14e-12!5;UBERON:0002416!8.14e-12!5;UBERON:0007383!8.14e-12!5;UBERON:0000344!1.27e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,7.79e-28,5;UBERON:0001003,7.79e-28,5;UBERON:0002097,7.79e-28,5;UBERON:0002199,7.79e-28,5;UBERON:0007029,7.79e-28,5;UBERON:0007376,7.79e-28,5;UBERON:0002416,7.79e-28,5;UBERON:0007383,7.79e-28,5;UBERON:0000344,3.38e-13,15;UBERON:0001962,7.08e-13,2;UBERON:0001961,7.08e-13,2;UBERON:0001744,7.08e-13,2;UBERON:0003350,5.09e-10,9;UBERON:0004808,5.09e-10,9;UBERON:0001277,5.09e-10,9;UBERON:0002465,7.12e-09,3;UBERON:0000485,3.12e-08,11;UBERON:0004923,4.23e-08,24;UBERON:0003199,2.75e-07,1;UBERON:0001242,5.45e-07,13;UBERON:0001262,5.45e-07,13;UBERON:0004786,5.45e-07,13 | |||
|phase1_expression=0,10.8182376368202,14.5599756604652,0,0.500895729946347,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,124.954082201651,133.516201581093,5.7423196411502,7.75371593086335,3.878482188346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9558856235938,3.71368181400583,3.31721087104857,6.68485126417564,10.1767357841938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0.179026695667481,0,0.240390899039938,0,0.403865799792591,0.304827226619999,0.201652370273681,0.779663045918019,0.192423683280659,1.5193997283604,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.661774257358546,0 | |phase1_expression=0,10.8182376368202,14.5599756604652,0,0.500895729946347,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,124.954082201651,133.516201581093,5.7423196411502,7.75371593086335,3.878482188346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.9558856235938,3.71368181400583,3.31721087104857,6.68485126417564,10.1767357841938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0.179026695667481,0,0.240390899039938,0,0.403865799792591,0.304827226619999,0.201652370273681,0.779663045918019,0.192423683280659,1.5193997283604,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0.382576664137687,0.661774257358546,0 | ||
|short_description=p1@Mill1 | |short_description=p1@Mill1 | ||
}} | }} |
Latest revision as of 07:43, 26 September 2015
Short description: | p1@Mill1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mill1_5end |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | -130bp_to_ENSMUST00000066780, NM_153749, uc009fjh.1_5end |
EntrezGene: | Mill1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.95e-17 | 3 |
brush border epithelial cell | 6.55e-15 | 6 |
gut absorptive cell | 6.55e-15 | 6 |
enterocyte | 6.55e-15 | 6 |
columnar/cuboidal epithelial cell | 8.10e-13 | 7 |
epithelial cell | 3.30e-10 | 25 |
intestinal epithelial cell | 5.09e-10 | 9 |
epithelial cell of alimentary canal | 5.09e-10 | 9 |
defensive cell | 1.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 7.79e-28 | 5 |
skin epidermis | 7.79e-28 | 5 |
skin of body | 7.79e-28 | 5 |
integument | 7.79e-28 | 5 |
surface | 7.79e-28 | 5 |
outer epithelium | 7.79e-28 | 5 |
integumental system | 7.79e-28 | 5 |
enveloping layer of ectoderm | 7.79e-28 | 5 |
mucosa | 3.38e-13 | 15 |
gut-associated lymphoid tissue | 7.08e-13 | 2 |
mucosa-associated lymphoid tissue | 7.08e-13 | 2 |
lymphoid tissue | 7.08e-13 | 2 |
epithelium of mucosa | 5.09e-10 | 9 |
gastrointestinal system epithelium | 5.09e-10 | 9 |
intestinal epithelium | 5.09e-10 | 9 |
lymphoid system | 7.12e-09 | 3 |
simple columnar epithelium | 3.12e-08 | 11 |
organ component layer | 4.23e-08 | 24 |
egg chamber | 2.75e-07 | 1 |
intestinal mucosa | 5.45e-07 | 13 |
wall of intestine | 5.45e-07 | 13 |
gastrointestinal system mucosa | 5.45e-07 | 13 |