FFCP PHASE1:Mm9::chr7:19303424..19303441,+: Difference between revisions
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|id=chr7:19303424..19303441,+
|short_description=p2@Psg22
|description=CAGE_peak_2_at_Psg22_5end
|association_with_transcript=0bp_to_ENSMUST00000051973,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=243862 | |EntrezGene=243862 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=Q810J1,E9Q6J7 | |UniProt=Q810J1,E9Q6J7 | ||
|association_with_transcript=0bp_to_ENSMUST00000051973,ENSMUST00000108481,NM_001004152,uc009fjq.1_5end | |||
|cluster_id=chr7:19303424..19303441,+ | |||
|description=CAGE_peak_2_at_Psg22_5end | |||
|id=chr7:19303424..19303441,+ | |||
|ontology_enrichment_celltype=CL:0000239!9.12e-22!6;CL:0000677!9.12e-22!6;CL:0000212!9.12e-22!6;CL:0000584!9.12e-22!6;CL:0000075!1.18e-18!7;CL:0000473!1.20e-16!3;CL:0000627!1.20e-16!3;CL:0000682!1.20e-16!3;CL:0002563!1.68e-14!9;CL:0002251!1.68e-14!9;CL:0000066!1.25e-12!25;CL:0002076!1.18e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.57e-26,3;CL:0000239,1.01e-13,6;CL:0000677,1.01e-13,6;CL:0000584,1.01e-13,6;CL:0000066,1.98e-12,25;CL:0000075,7.40e-12,7;CL:0000473,8.78e-12,7;CL:0002563,2.33e-09,9;CL:0002251,2.33e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.93e-25!24;UBERON:0000344!1.04e-21!15;UBERON:0005631!1.20e-16!3;UBERON:0000478!1.20e-16!3;UBERON:0000158!1.20e-16!3;UBERON:0003350!1.68e-14!9;UBERON:0004808!1.68e-14!9;UBERON:0001277!1.68e-14!9;UBERON:0001242!4.61e-14!13;UBERON:0000060!4.61e-14!13;UBERON:0001262!4.61e-14!13;UBERON:0004786!4.61e-14!13;UBERON:0005795!2.33e-12!4;UBERON:0000995!2.33e-12!4;UBERON:0001962!3.84e-12!2;UBERON:0001961!3.84e-12!2;UBERON:0001744!3.84e-12!2;UBERON:0000485!7.55e-12!11;UBERON:0001987!9.10e-12!2;UBERON:0003124!9.10e-12!2;UBERON:0004340!9.10e-12!2;UBERON:0003975!5.39e-10!5;UBERON:0002465!2.23e-08!3;UBERON:0003199!6.50e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,4.66e-19,2;UBERON:0001961,4.66e-19,2;UBERON:0001744,4.66e-19,2;UBERON:0004923,8.35e-18,24;UBERON:0000344,7.20e-15,15;UBERON:0002465,4.82e-13,3;UBERON:0005631,9.50e-13,3;UBERON:0000478,9.50e-13,3;UBERON:0000158,9.50e-13,3;UBERON:0003199,2.01e-10,1;UBERON:0000305,8.42e-10,1;UBERON:0003350,2.33e-09,9;UBERON:0004808,2.33e-09,9;UBERON:0001277,2.33e-09,9;UBERON:0000485,9.22e-08,11 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,0.30246421130683,0,0.839396359559449,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,8.48814339948529,1.72269589234506,3.87685796543167,4.30942465371778,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,14.6164128896036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.27499619694768,0.30246421130683,0,0.839396359559449,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,8.48814339948529,1.72269589234506,3.87685796543167,4.30942465371778,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,14.6164128896036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Psg22 | |||
}} | }} |
Latest revision as of 07:49, 26 September 2015
Short description: | p2@Psg22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psg22_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 0bp_to_ENSMUST00000051973, ENSMUST00000108481, NM_001004152, uc009fjq.1_5end |
EntrezGene: | Psg22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.57e-26 | 3 |
brush border epithelial cell | 1.01e-13 | 6 |
gut absorptive cell | 1.01e-13 | 6 |
enterocyte | 1.01e-13 | 6 |
epithelial cell | 1.98e-12 | 25 |
columnar/cuboidal epithelial cell | 7.40e-12 | 7 |
defensive cell | 8.78e-12 | 7 |
intestinal epithelial cell | 2.33e-09 | 9 |
epithelial cell of alimentary canal | 2.33e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 4.66e-19 | 2 |
mucosa-associated lymphoid tissue | 4.66e-19 | 2 |
lymphoid tissue | 4.66e-19 | 2 |
organ component layer | 8.35e-18 | 24 |
mucosa | 7.20e-15 | 15 |
lymphoid system | 4.82e-13 | 3 |
extraembryonic membrane | 9.50e-13 | 3 |
extraembryonic structure | 9.50e-13 | 3 |
membranous layer | 9.50e-13 | 3 |
egg chamber | 2.01e-10 | 1 |
amnion | 8.42e-10 | 1 |
epithelium of mucosa | 2.33e-09 | 9 |
gastrointestinal system epithelium | 2.33e-09 | 9 |
intestinal epithelium | 2.33e-09 | 9 |
simple columnar epithelium | 9.22e-08 | 11 |