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FFCP PHASE1:Mm9::chr7:20283699..20283730,-: Difference between revisions

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{{FFCP|EntrezGene=11816|HGNC=|MCL_coexpression_id=8|UniProt=P08226|association_with_transcript=25bp_to_ENSMUST00000173739_5end|description=CAGE_peak_3_at_Apoe_5end|id=chr7:20283699..20283730,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.17e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.00e-15!22;UBERON:0007499!1.00e-15!22;UBERON:0006925!1.00e-15!22;UBERON:0009497!1.00e-15!22;UBERON:0000015!1.00e-15!22;UBERON:0002423!1.00e-15!22;UBERON:0006235!1.00e-15!22;UBERON:0008835!1.00e-15!22;UBERON:0003894!1.00e-15!22;UBERON:0004161!1.00e-15!22;UBERON:0008836!1.00e-15!22;UBERON:0002365!1.43e-14!25;UBERON:0002330!1.43e-14!25;UBERON:0009854!2.04e-14!23;UBERON:0009856!2.04e-14!23;UBERON:0005177!1.06e-12!85;UBERON:0005172!1.34e-12!49;UBERON:0005173!1.34e-12!49;UBERON:0002417!1.34e-12!49;UBERON:0000916!1.34e-12!49;UBERON:0009569!6.46e-12!66;UBERON:0005256!6.57e-12!47;UBERON:0002100!6.82e-12!98;UBERON:0000466!1.13e-09!79;UBERON:0003914!1.63e-09!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.08e-25,22;UBERON:0007499,6.08e-25,22;UBERON:0006925,6.08e-25,22;UBERON:0009497,6.08e-25,22;UBERON:0000015,6.08e-25,22;UBERON:0002423,6.08e-25,22;UBERON:0006235,6.08e-25,22;UBERON:0008835,6.08e-25,22;UBERON:0003894,6.08e-25,22;UBERON:0004161,6.08e-25,22;UBERON:0008836,6.08e-25,22;UBERON:0009854,1.73e-23,23;UBERON:0009856,1.73e-23,23;UBERON:0002365,6.15e-21,25;UBERON:0002330,6.15e-21,25;UBERON:0005172,1.64e-13,49;UBERON:0005173,1.64e-13,49;UBERON:0002417,1.64e-13,49;UBERON:0000916,1.64e-13,49;UBERON:0005177,2.58e-13,79;UBERON:0009569,3.09e-12,66;UBERON:0005256,8.22e-12,45;UBERON:0002100,6.55e-11,90;UBERON:0003104,8.08e-10,61;UBERON:0009142,8.08e-10,61;UBERON:0003914,4.24e-09,47;UBERON:0000949,1.67e-07,72|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.550640256485045,14.0830441982647,1.96222640742402,4.61340983742391,3.69416808241138,0.55994568650145,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,2.71075625655306,0,0.899899717281399,3.9554654502679,0,5.39280198933128,26.8952813725088,0,0,0,0.856952953211411,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0.837548997004143,0.56276261003168,1.06958773443767,0,0,0.186399445825301,0.075726193333184,0,29.5661778475711,90.3445070830456,65.2772480359441,96.6068713031693,152.047681682755,120.967259516281,18.8195522976547,0,0,0,0.845060518660083,0,0,0,0,0,0,33.4558767576846,0.517875767294343,1.1875371125186,0.346970653532272,0.913396434936424,2.30615497256059,0.904335843315735,0.470354828542819,1.13099932196708,3.46072954828123,1.01219549843938,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,0.248813941220186,0.505445516867349,0.420883711772948,0,0,0,1.35634336052144,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.324275238183423,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.994782360205754,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,1.01178459398812,10.0374900626129,3.29697328466887,6.91024117962083,119.173956089034,1.00107063429656,2.16214894624523,2.02375901146368,6.08580364165509,11.8176808278684,24.9533334745791,23.0156909960649,21.7261203878547,45.0280717628454,10.0637744569148,50.239027935248,84.5622094140459,127.047175607397,127.730958427601,155.829257400368,1.47802552133284,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,1.36593553500459,0.315270288212382,0,0.318909537314974,1.80249646187312,1.38147985492716,1.44649058581512,0,0,0,0.827810238914197,0.642202359951168,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.567760340833074,0.712262414669021,0.488660878060728,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,1.45413491791002,1.06949213515416,1.58018378967908,3.16255825724996,3.09406629744561,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,1.08563264870681,0.716234064018819,1.31312719796049,0,0.556275906031529,0.341741761595705,0.619160603889667,0,0.753473828018764,0,0.457556346413045,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,4.79390043206948,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.911430693907651,0.419437377702843,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0,0,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.419226325255965,1.65459157605013,2.22246727801615,3.29656091582231,0.64183841918363,2.02157769411038,0.50695859978048,1.69763707247469,1.68554713445788,1.28050304809739,1.43588672389033,1.42888107384922,1.50649623728312,1.15745532278223,1.64834360321323,1.17759136107518,1.37147700954166,2.48466128623072,1.90748951957857,1.30811774969096,1.2234219453993,2.19997980518359,1.28049581010941,1.8414879800649,1.62964936615034,0.561142271657738,2.37270036248348,1.18205378850676,2.04615521584845,2.16911577660352,2.3148793317737,0,1.87145286756327,1.28922632428979,0,0.882365676478062,0.231867835620421|short_description=p3@Apoe}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11816
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P08226
|association_with_transcript=25bp_to_ENSMUST00000173739_5end
|cluster_id=chr7:20283699..20283730,-
|description=CAGE_peak_3_at_Apoe_5end
|id=chr7:20283699..20283730,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.17e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.00e-15!22;UBERON:0007499!1.00e-15!22;UBERON:0006925!1.00e-15!22;UBERON:0009497!1.00e-15!22;UBERON:0000015!1.00e-15!22;UBERON:0002423!1.00e-15!22;UBERON:0006235!1.00e-15!22;UBERON:0008835!1.00e-15!22;UBERON:0003894!1.00e-15!22;UBERON:0004161!1.00e-15!22;UBERON:0008836!1.00e-15!22;UBERON:0002365!1.43e-14!25;UBERON:0002330!1.43e-14!25;UBERON:0009854!2.04e-14!23;UBERON:0009856!2.04e-14!23;UBERON:0005177!1.06e-12!85;UBERON:0005172!1.34e-12!49;UBERON:0005173!1.34e-12!49;UBERON:0002417!1.34e-12!49;UBERON:0000916!1.34e-12!49;UBERON:0009569!6.46e-12!66;UBERON:0005256!6.57e-12!47;UBERON:0002100!6.82e-12!98;UBERON:0000466!1.13e-09!79;UBERON:0003914!1.63e-09!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.08e-25,22;UBERON:0007499,6.08e-25,22;UBERON:0006925,6.08e-25,22;UBERON:0009497,6.08e-25,22;UBERON:0000015,6.08e-25,22;UBERON:0002423,6.08e-25,22;UBERON:0006235,6.08e-25,22;UBERON:0008835,6.08e-25,22;UBERON:0003894,6.08e-25,22;UBERON:0004161,6.08e-25,22;UBERON:0008836,6.08e-25,22;UBERON:0009854,1.73e-23,23;UBERON:0009856,1.73e-23,23;UBERON:0002365,6.15e-21,25;UBERON:0002330,6.15e-21,25;UBERON:0005172,1.64e-13,49;UBERON:0005173,1.64e-13,49;UBERON:0002417,1.64e-13,49;UBERON:0000916,1.64e-13,49;UBERON:0005177,2.58e-13,79;UBERON:0009569,3.09e-12,66;UBERON:0005256,8.22e-12,45;UBERON:0002100,6.55e-11,90;UBERON:0003104,8.08e-10,61;UBERON:0009142,8.08e-10,61;UBERON:0003914,4.24e-09,47;UBERON:0000949,1.67e-07,72
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.408338712524738,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.550640256485045,14.0830441982647,1.96222640742402,4.61340983742391,3.69416808241138,0.55994568650145,0,0,0,0,0,0.573066879877513,1.54701627683233,0,0,0,2.71075625655306,0,0.899899717281399,3.9554654502679,0,5.39280198933128,26.8952813725088,0,0,0,0.856952953211411,0.220868540951614,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0.837548997004143,0.56276261003168,1.06958773443767,0,0,0.186399445825301,0.075726193333184,0,29.5661778475711,90.3445070830456,65.2772480359441,96.6068713031693,152.047681682755,120.967259516281,18.8195522976547,0,0,0,0.845060518660083,0,0,0,0,0,0,33.4558767576846,0.517875767294343,1.1875371125186,0.346970653532272,0.913396434936424,2.30615497256059,0.904335843315735,0.470354828542819,1.13099932196708,3.46072954828123,1.01219549843938,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.509196819251581,0.248813941220186,0.505445516867349,0.420883711772948,0,0,0,1.35634336052144,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.324275238183423,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.994782360205754,0.19496408711912,0,0.432276099749388,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,1.01178459398812,10.0374900626129,3.29697328466887,6.91024117962083,119.173956089034,1.00107063429656,2.16214894624523,2.02375901146368,6.08580364165509,11.8176808278684,24.9533334745791,23.0156909960649,21.7261203878547,45.0280717628454,10.0637744569148,50.239027935248,84.5622094140459,127.047175607397,127.730958427601,155.829257400368,1.47802552133284,0.37898282354097,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,1.36593553500459,0.315270288212382,0,0.318909537314974,1.80249646187312,1.38147985492716,1.44649058581512,0,0,0,0.827810238914197,0.642202359951168,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0.567760340833074,0.712262414669021,0.488660878060728,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,1.45413491791002,1.06949213515416,1.58018378967908,3.16255825724996,3.09406629744561,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,1.08563264870681,0.716234064018819,1.31312719796049,0,0.556275906031529,0.341741761595705,0.619160603889667,0,0.753473828018764,0,0.457556346413045,0,0.139951452323658,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,4.79390043206948,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0,0.352071715937262,0.911430693907651,0.419437377702843,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0,0,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21553358534147,0.419226325255965,1.65459157605013,2.22246727801615,3.29656091582231,0.64183841918363,2.02157769411038,0.50695859978048,1.69763707247469,1.68554713445788,1.28050304809739,1.43588672389033,1.42888107384922,1.50649623728312,1.15745532278223,1.64834360321323,1.17759136107518,1.37147700954166,2.48466128623072,1.90748951957857,1.30811774969096,1.2234219453993,2.19997980518359,1.28049581010941,1.8414879800649,1.62964936615034,0.561142271657738,2.37270036248348,1.18205378850676,2.04615521584845,2.16911577660352,2.3148793317737,0,1.87145286756327,1.28922632428979,0,0.882365676478062,0.231867835620421
|short_description=p3@Apoe
}}

Latest revision as of 09:00, 26 September 2015

Short description:p3@Apoe
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Apoe_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 25bp_to_ENSMUST00000173739_5end
EntrezGene:Apoe
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Apoe

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E826.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F790.34
Mouse hepatocyte, donor1.CNhs13078.11714-123C465.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C896.61
Mouse hepatocyte, donor6.CNhs13090.11822-124F4152.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F6120.97
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B633.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I110.04
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B2119.17
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F511.82
liver, embryo E17.CNhs10510.481-18A324.95
liver, embryo E18.CNhs10579.499-43G423.02
liver, neonate N00.CNhs11117.641-24F421.73
liver, neonate N03.CNhs11123.1345-25G245.03
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H250.24
liver, neonate N10.CNhs11115.751-24B984.56
liver, neonate N20.CNhs11220.823-25A3127.05
liver, neonate N25.CNhs11198.1368-26H1127.73
liver, neonate N30.CNhs11106.1382-42D1155.83
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A94.79
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.17e-075

Uber anatomy
Ontology termp-valuen
liver6.08e-2522
epithelial sac6.08e-2522
digestive gland6.08e-2522
epithelium of foregut-midgut junction6.08e-2522
anatomical boundary6.08e-2522
hepatobiliary system6.08e-2522
foregut-midgut junction6.08e-2522
hepatic diverticulum6.08e-2522
liver primordium6.08e-2522
septum transversum6.08e-2522
liver bud6.08e-2522
digestive tract diverticulum1.73e-2323
sac1.73e-2323
exocrine gland6.15e-2125
exocrine system6.15e-2125
abdomen element1.64e-1349
abdominal segment element1.64e-1349
abdominal segment of trunk1.64e-1349
abdomen1.64e-1349
trunk region element2.58e-1379
subdivision of trunk3.09e-1266
trunk mesenchyme8.22e-1245
trunk6.55e-1190
mesenchyme8.08e-1061
entire embryonic mesenchyme8.08e-1061
epithelial tube4.24e-0947
endocrine system1.67e-0772
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