FFCP PHASE1:Mm9::chr4:128925659..128925674,-: Difference between revisions
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{{FFCP|EntrezGene=97130|HGNC=|MCL_coexpression_id=24|UniProt=A2A7S8|association_with_transcript=12bp_to_ENSMUST00000052602,NM_001033189,uc008uwn.1_5end|description=CAGE_peak_4_at_C77080_5end|id=chr4:128925659..128925674,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,9.49e-11,25;CL:0000223,4.27e-09,20;CL:0000239,9.69e-09,6;CL:0000677,9.69e-09,6;CL:0000584,9.69e-09,6;CL:0002563,3.87e-08,9;CL:0002251,3.87e-08,9;CL:0000075,2.83e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.80e-13!130;UBERON:0000925!3.80e-13!130;UBERON:0006595!3.80e-13!130;UBERON:0001007!3.63e-12!128;UBERON:0001555!3.63e-12!128;UBERON:0007026!3.63e-12!128;UBERON:0000160!9.01e-12!43;UBERON:0004921!3.15e-11!126;UBERON:0004185!3.15e-11!126;UBERON:0005409!5.91e-11!59;UBERON:0000344!1.30e-08!15;UBERON:0001242!2.00e-07!13;UBERON:0000060!2.00e-07!13;UBERON:0001262!2.00e-07!13;UBERON:0004786!2.00e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.56e-19,31;UBERON:0004119,1.28e-16,118;UBERON:0000925,1.28e-16,118;UBERON:0006595,1.28e-16,118;UBERON:0005409,3.10e-16,47;UBERON:0001007,3.99e-15,116;UBERON:0001555,3.99e-15,116;UBERON:0007026,3.99e-15,116;UBERON:0000344,2.12e-14,15;UBERON:0004921,1.05e-13,114;UBERON:0001242,2.33e-12,13;UBERON:0001262,2.33e-12,13;UBERON:0004786,2.33e-12,13;UBERON:0004923,8.34e-12,24;UBERON:0003350,3.87e-08,9;UBERON:0004808,3.87e-08,9;UBERON:0001277,3.87e-08,9|phase1_expression=0.160148847104794,25.126229350034,26.3899558845931,26.616850595001,29.0519523368881,8.39396359559449,7.47560449905682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,5.11975752938901,5.96464130774642,13.7815671387605,12.9228598847722,9.48073423817912,6.46079626151671,7.05684363327806,5.09980174507201,1.27006134691926,0.61506478758457,0,0,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,1.7997994345628,3.9554654502679,2.1314403448383,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.681535739998656,0.226714680320357,0.869593466105033,0,8.15965600449301,5.39703191637817,2.59910566979068,8.96053774194671,2.66844398250329,0.170430322578058,0,0,0,0,0,0,1.94841936910093,3.29367825117628,0.505524445014783,3.9964357901671,0.517875767294343,1.03909497345377,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,14.8316980640624,0.433798070759735,0,0.808834249737046,1.76673214768315,0,3.72783522436244,0,0,8.9409969323007,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.622034853050465,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.30140963567143,0.408218994907967,0,0.374806898238915,0.776110112217047,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0,0.486412857275134,0,0.439100230582101,0.134206418760372,0.420579897128254,0,12.8863325363681,6.87571473325215,0.213288250535234,0,0.902072229254653,1.4117846723634,1.55664630691409,2.28270751335071,8.54152310780121,0.988193728344065,3.51869292320377,0.795825888164603,3.70431765526328,4.49409704327111,4.75503709724327,6.77080329064848,0,0,0,0,0.387904974335251,0.350679099451593,0.442655759869801,0.590440591918409,1.09899109488962,0.987177311374404,4.44678940630723,0,0.196558995113203,0,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.324270453550071,0.823684239564244,5.75072826109418,1.86070473834252,1.24815069245824,2.27320990152401,2.33216637578486,3.85954817090694,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,2.14647012643579,0.788175720530955,0.664394068946325,0.797273843287435,1.14704320301017,1.38147985492716,1.01254341007058,3.01582567878545,2.17562273527484,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.651547837414304,0.824850614862677,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,2.32585463851399,0.363533729477506,1.06949213515416,0.632073515871632,0,2.06271086496374,1.36175842301515,0,0,0,0.177340233642274,0,0.329098041204242,0.913394847343798,8.44818149029357,4.02480934641258,0.661585194164886,0.32977250588296,1.29171541356724,0.301564624640779,1.07435109602823,0.656563598980245,4.08073171281791,0,0,0.412773735926445,0,0,0.136694227721025,0,0.509935289981566,0.419854356970974,0.967399816630967,2.86401185404534,0,0.406638934253697,0.432021363287205,1.25452977608681,1.9652630737156,0.944050424693745,2.64491058321075,1.30877970992015,2.72191443912765,3.72803587852155,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0.308132871494482,0,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0,0.15241361331,0.100826185136841,0.584747284438515,0,0.116876902181569,1.81384306892169,1.33191572024439,0.269141569828427,1.51096154727671,0.965947970160952,3.56596703357246,0.915758121336325,1.2862102744744,3.00943262421218,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.512200817262403,0,0,1.10306105070008,0.222246727801615,0.206035057238894,0.962757628775446,0,0,0.377252682772152,0.561849044819294,0.576226371643824,0.804096565378586,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,0.564656282491984,0.761531471025089,0.365855945745545,1.05227884575137,0.407412341537585,1.68342681497322,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,1.28922632428979,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p4@C77080}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=97130 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=A2A7S8 | |||
|association_with_transcript=12bp_to_ENSMUST00000052602,NM_001033189,uc008uwn.1_5end | |||
|cluster_id=chr4:128925659..128925674,- | |||
|description=CAGE_peak_4_at_C77080_5end | |||
|id=chr4:128925659..128925674,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.49e-11,25;CL:0000223,4.27e-09,20;CL:0000239,9.69e-09,6;CL:0000677,9.69e-09,6;CL:0000584,9.69e-09,6;CL:0002563,3.87e-08,9;CL:0002251,3.87e-08,9;CL:0000075,2.83e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.80e-13!130;UBERON:0000925!3.80e-13!130;UBERON:0006595!3.80e-13!130;UBERON:0001007!3.63e-12!128;UBERON:0001555!3.63e-12!128;UBERON:0007026!3.63e-12!128;UBERON:0000160!9.01e-12!43;UBERON:0004921!3.15e-11!126;UBERON:0004185!3.15e-11!126;UBERON:0005409!5.91e-11!59;UBERON:0000344!1.30e-08!15;UBERON:0001242!2.00e-07!13;UBERON:0000060!2.00e-07!13;UBERON:0001262!2.00e-07!13;UBERON:0004786!2.00e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.56e-19,31;UBERON:0004119,1.28e-16,118;UBERON:0000925,1.28e-16,118;UBERON:0006595,1.28e-16,118;UBERON:0005409,3.10e-16,47;UBERON:0001007,3.99e-15,116;UBERON:0001555,3.99e-15,116;UBERON:0007026,3.99e-15,116;UBERON:0000344,2.12e-14,15;UBERON:0004921,1.05e-13,114;UBERON:0001242,2.33e-12,13;UBERON:0001262,2.33e-12,13;UBERON:0004786,2.33e-12,13;UBERON:0004923,8.34e-12,24;UBERON:0003350,3.87e-08,9;UBERON:0004808,3.87e-08,9;UBERON:0001277,3.87e-08,9 | |||
|phase1_expression=0.160148847104794,25.126229350034,26.3899558845931,26.616850595001,29.0519523368881,8.39396359559449,7.47560449905682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,5.11975752938901,5.96464130774642,13.7815671387605,12.9228598847722,9.48073423817912,6.46079626151671,7.05684363327806,5.09980174507201,1.27006134691926,0.61506478758457,0,0,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,1.7997994345628,3.9554654502679,2.1314403448383,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.681535739998656,0.226714680320357,0.869593466105033,0,8.15965600449301,5.39703191637817,2.59910566979068,8.96053774194671,2.66844398250329,0.170430322578058,0,0,0,0,0,0,1.94841936910093,3.29367825117628,0.505524445014783,3.9964357901671,0.517875767294343,1.03909497345377,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,14.8316980640624,0.433798070759735,0,0.808834249737046,1.76673214768315,0,3.72783522436244,0,0,8.9409969323007,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.622034853050465,0.252722758433675,1.68353484709179,0.130120442962704,0,0,0.30140963567143,0.408218994907967,0,0.374806898238915,0.776110112217047,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0,0,0.536546802799238,0.116765342367169,0.329119699826961,0,0.486412857275134,0,0.439100230582101,0.134206418760372,0.420579897128254,0,12.8863325363681,6.87571473325215,0.213288250535234,0,0.902072229254653,1.4117846723634,1.55664630691409,2.28270751335071,8.54152310780121,0.988193728344065,3.51869292320377,0.795825888164603,3.70431765526328,4.49409704327111,4.75503709724327,6.77080329064848,0,0,0,0,0.387904974335251,0.350679099451593,0.442655759869801,0.590440591918409,1.09899109488962,0.987177311374404,4.44678940630723,0,0.196558995113203,0,0.405720242777006,0.72353147925725,1.01850340712568,0.863088412352432,0.324270453550071,0.823684239564244,5.75072826109418,1.86070473834252,1.24815069245824,2.27320990152401,2.33216637578486,3.85954817090694,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,2.14647012643579,0.788175720530955,0.664394068946325,0.797273843287435,1.14704320301017,1.38147985492716,1.01254341007058,3.01582567878545,2.17562273527484,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.651547837414304,0.824850614862677,2.65490276679926,0,0.302323556964751,0.188605079755898,0,0.307435147943927,2.32585463851399,0.363533729477506,1.06949213515416,0.632073515871632,0,2.06271086496374,1.36175842301515,0,0,0,0.177340233642274,0,0.329098041204242,0.913394847343798,8.44818149029357,4.02480934641258,0.661585194164886,0.32977250588296,1.29171541356724,0.301564624640779,1.07435109602823,0.656563598980245,4.08073171281791,0,0,0.412773735926445,0,0,0.136694227721025,0,0.509935289981566,0.419854356970974,0.967399816630967,2.86401185404534,0,0.406638934253697,0.432021363287205,1.25452977608681,1.9652630737156,0.944050424693745,2.64491058321075,1.30877970992015,2.72191443912765,3.72803587852155,0,0.149516546043979,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0.308132871494482,0,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0,0.15241361331,0.100826185136841,0.584747284438515,0,0.116876902181569,1.81384306892169,1.33191572024439,0.269141569828427,1.51096154727671,0.965947970160952,3.56596703357246,0.915758121336325,1.2862102744744,3.00943262421218,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.512200817262403,0,0,1.10306105070008,0.222246727801615,0.206035057238894,0.962757628775446,0,0,0.377252682772152,0.561849044819294,0.576226371643824,0.804096565378586,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,0.564656282491984,0.761531471025089,0.365855945745545,1.05227884575137,0.407412341537585,1.68342681497322,0.237270036248348,0.591026894253381,0.409231043169689,0.309873682371932,0.771626443924566,0,0.467863216890817,1.28922632428979,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p4@C77080 | |||
}} |
Latest revision as of 09:16, 26 September 2015
Short description: | p4@C77080 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C77080_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 12bp_to_ENSMUST00000052602, NM_001033189, uc008uwn.1_5end |
EntrezGene: | C77080 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.49e-11 | 25 |
endodermal cell | 4.27e-09 | 20 |
brush border epithelial cell | 9.69e-09 | 6 |
gut absorptive cell | 9.69e-09 | 6 |
enterocyte | 9.69e-09 | 6 |
intestinal epithelial cell | 3.87e-08 | 9 |
epithelial cell of alimentary canal | 3.87e-08 | 9 |
columnar/cuboidal epithelial cell | 2.83e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.56e-19 | 31 |
endoderm-derived structure | 1.28e-16 | 118 |
endoderm | 1.28e-16 | 118 |
presumptive endoderm | 1.28e-16 | 118 |
gastrointestinal system | 3.10e-16 | 47 |
digestive system | 3.99e-15 | 116 |
digestive tract | 3.99e-15 | 116 |
primitive gut | 3.99e-15 | 116 |
mucosa | 2.12e-14 | 15 |
subdivision of digestive tract | 1.05e-13 | 114 |
intestinal mucosa | 2.33e-12 | 13 |
wall of intestine | 2.33e-12 | 13 |
gastrointestinal system mucosa | 2.33e-12 | 13 |
organ component layer | 8.34e-12 | 24 |
epithelium of mucosa | 3.87e-08 | 9 |
gastrointestinal system epithelium | 3.87e-08 | 9 |
intestinal epithelium | 3.87e-08 | 9 |