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FFCP PHASE1:Mm9::chr6:100621120..100621172,-: Difference between revisions

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{{FFCP|EntrezGene=72171|HGNC=|UniProt=Q7TMX5|association_with_transcript=0bp_to_ENSMUST00000089245,ENSMUST00000113312,ENSMUST00000162776,ENSMUST00000170667,NM_181590,uc009dby.2,uc009dbz.2_5end|description=CAGE_peak_1_at_Shq1_5end|id=chr6:100621120..100621172,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.98e-12!79;UBERON:0000949!4.12e-10!72;UBERON:0001041!2.59e-09!92;UBERON:0000077!3.14e-09!97;UBERON:0003104!9.22e-09!131;UBERON:0009142!9.22e-09!131;UBERON:0000926!1.45e-08!193;UBERON:0004120!1.45e-08!193;UBERON:0006603!1.45e-08!193;UBERON:0002553!3.69e-08!39;UBERON:0000464!3.93e-08!57;UBERON:0009569!4.13e-08!66;UBERON:0005177!4.22e-08!85;UBERON:0004921!7.72e-08!126;UBERON:0004185!7.72e-08!126;UBERON:0002530!8.61e-08!65;UBERON:0003886!1.14e-07!38;UBERON:0002368!1.21e-07!60;UBERON:0005172!1.29e-07!49;UBERON:0005173!1.29e-07!49;UBERON:0002417!1.29e-07!49;UBERON:0000916!1.29e-07!49;UBERON:0001007!1.42e-07!128;UBERON:0001555!1.42e-07!128;UBERON:0007026!1.42e-07!128;UBERON:0002323!1.50e-07!37;UBERON:0004458!1.50e-07!37;UBERON:0001048!2.77e-07!147;UBERON:0004119!4.82e-07!130;UBERON:0000925!4.82e-07!130;UBERON:0006595!4.82e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-10,79;UBERON:0000949,4.01e-10,72;UBERON:0002553,3.69e-08,39;UBERON:0009569,4.13e-08,66;UBERON:0002530,8.41e-08,65;UBERON:0003886,1.14e-07,38;UBERON:0002368,1.19e-07,60;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0002323,1.50e-07,37;UBERON:0004458,1.50e-07,37;UBERON:0002100,1.85e-07,90;UBERON:0001041,5.91e-07,80|phase1_expression=5.92550734287738,2.79180326111489,0,1.20985684522732,0.500895729946347,10.9121526742728,6.54115393667472,5.55230290798778,8.4473233291,9.12851652655775,20.3749382188351,20.9800778157735,5.47842335779858,5.50748535239684,7.32841475994458,6.07425802169478,6.29605690315332,4.73193248037357,7.67840828192137,6.36584477697045,6.37824676133023,8.34043990087437,8.097193463307,5.43974237497583,5.50582274561208,4.01962374880514,3.87685796543167,5.817723282519,3.42042155021473,2.77233142735924,5.98672378769323,37.4668097341182,26.4477858661365,0,14.731432607315,10.805251948302,12.2501613757421,1.25559489221072,0,0,1.76469446409304,0.683045484958446,0.485510353031154,5.16176953699867,5.37297735463427,5.68994931701213,0.782391344348039,1.96222640742402,2.85592037554813,2.13872888981712,2.65974201088189,4.31257693094915,6.37573903019398,5.80289713609076,6.04968838456435,3.60163210450326,3.15186783932632,3.09403255366465,5.66486090406874,5.81890077199236,4.43681982454325,4.06613438482959,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,1.79760066311043,0.768436610643109,6.32506635081714,5.67024940993101,6.73039876324422,1.71390590642282,3.53389665522582,6.98197555525238,5.36734637702124,5.51531271966013,4.40463523997555,2.93680877595932,5.06901559745603,3.42904348098504,4.39140689291566,5.2091337055676,2.51264699101243,5.06486349028512,4.43114918552749,4.71405736757868,3.70166370077668,3.72798891650601,8.78423842664935,4.30757892608677,3.18850937571846,5.16254326188832,11.5595126730318,7.55584468292944,5.84798775702902,7.16843019355737,3.7919993435573,6.13549161281008,4.41636207824877,7.77347063922748,6.05626705039726,3.84979432242953,10.1922095882658,0,10.6080610095495,9.88103475352884,11.1215377903252,5.25245846707676,15.018397251536,7.12522267511159,10.235634279202,8.22056791442781,7.14908041493781,7.988299949289,7.17291113527799,6.03199638382442,6.17987419335935,4.916378135277,4.42305275974937,6.47067399789637,4.85851340612866,8.24287930329878,7.45567044872489,3.51336956413857,3.97948742945565,4.59822699375465,8.74650408893218,6.59893004092748,8.38663498682227,4.49371918214468,6.8625090422794,3.76963056338593,3.47648640384553,4.34716277461562,4.98691306942944,3.73154905055843,5.29564692021645,6.22034853050465,7.32895999457657,4.62972082950243,7.026503919986,9.65588838620586,7.20248519221397,6.0281927134286,8.16437989815934,6.79002717509704,8.71426038405478,5.17406741478031,7.32931175971664,7.18603104637713,8.09375171154165,6.79506770525482,8.06337022754234,7.3132954969655,5.76189981942242,11.3449532086541,13.3420505589515,9.26452465612975,12.5031939734061,5.79952163099405,5.62862543954631,7.02242039697958,4.49814997611899,5.50939848892731,3.85667782218446,5.8133486187602,5.633741429392,4.67061369468678,5.43047504714485,4.59668899421467,3.97237166774693,3.80119967305864,3.29325172936576,2.28150911892632,2.73376933133365,6.27718135513635,2.64335026387038,4.23120906661671,8.74481827194459,8.59275685883622,12.2424088255989,7.46229041106367,5.55945109612176,6.27744566171445,7.11793592316767,5.76446341534038,6.53471542880701,5.76973768919337,4.09424582950152,8.08937467788799,4.97117514711797,5.77509692437665,7.77638393907635,8.68288695833939,11.270773567308,9.36796108088446,6.20647958936402,7.85521182771568,6.260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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72171
|HGNC=
|TSSclassifier=NA
|UniProt=Q7TMX5
|association_with_transcript=0bp_to_ENSMUST00000089245,ENSMUST00000113312,ENSMUST00000162776,ENSMUST00000170667,NM_181590,uc009dby.2,uc009dbz.2_5end
|cluster_id=chr6:100621120..100621172,-
|description=CAGE_peak_1_at_Shq1_5end
|id=chr6:100621120..100621172,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000466!1.98e-12!79;UBERON:0000949!4.12e-10!72;UBERON:0001041!2.59e-09!92;UBERON:0000077!3.14e-09!97;UBERON:0003104!9.22e-09!131;UBERON:0009142!9.22e-09!131;UBERON:0000926!1.45e-08!193;UBERON:0004120!1.45e-08!193;UBERON:0006603!1.45e-08!193;UBERON:0002553!3.69e-08!39;UBERON:0000464!3.93e-08!57;UBERON:0009569!4.13e-08!66;UBERON:0005177!4.22e-08!85;UBERON:0004921!7.72e-08!126;UBERON:0004185!7.72e-08!126;UBERON:0002530!8.61e-08!65;UBERON:0003886!1.14e-07!38;UBERON:0002368!1.21e-07!60;UBERON:0005172!1.29e-07!49;UBERON:0005173!1.29e-07!49;UBERON:0002417!1.29e-07!49;UBERON:0000916!1.29e-07!49;UBERON:0001007!1.42e-07!128;UBERON:0001555!1.42e-07!128;UBERON:0007026!1.42e-07!128;UBERON:0002323!1.50e-07!37;UBERON:0004458!1.50e-07!37;UBERON:0001048!2.77e-07!147;UBERON:0004119!4.82e-07!130;UBERON:0000925!4.82e-07!130;UBERON:0006595!4.82e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.14e-10,79;UBERON:0000949,4.01e-10,72;UBERON:0002553,3.69e-08,39;UBERON:0009569,4.13e-08,66;UBERON:0002530,8.41e-08,65;UBERON:0003886,1.14e-07,38;UBERON:0002368,1.19e-07,60;UBERON:0005172,1.29e-07,49;UBERON:0005173,1.29e-07,49;UBERON:0002417,1.29e-07,49;UBERON:0000916,1.29e-07,49;UBERON:0002323,1.50e-07,37;UBERON:0004458,1.50e-07,37;UBERON:0002100,1.85e-07,90;UBERON:0001041,5.91e-07,80
|phase1_expression=5.92550734287738,2.79180326111489,0,1.20985684522732,0.500895729946347,10.9121526742728,6.54115393667472,5.55230290798778,8.4473233291,9.12851652655775,20.3749382188351,20.9800778157735,5.47842335779858,5.50748535239684,7.32841475994458,6.07425802169478,6.29605690315332,4.73193248037357,7.67840828192137,6.36584477697045,6.37824676133023,8.34043990087437,8.097193463307,5.43974237497583,5.50582274561208,4.01962374880514,3.87685796543167,5.817723282519,3.42042155021473,2.77233142735924,5.98672378769323,37.4668097341182,26.4477858661365,0,14.731432607315,10.805251948302,12.2501613757421,1.25559489221072,0,0,1.76469446409304,0.683045484958446,0.485510353031154,5.16176953699867,5.37297735463427,5.68994931701213,0.782391344348039,1.96222640742402,2.85592037554813,2.13872888981712,2.65974201088189,4.31257693094915,6.37573903019398,5.80289713609076,6.04968838456435,3.60163210450326,3.15186783932632,3.09403255366465,5.66486090406874,5.81890077199236,4.43681982454325,4.06613438482959,2.66788438833342,2.6996991518442,2.96659908770092,0.7104801149461,1.79760066311043,0.768436610643109,6.32506635081714,5.67024940993101,6.73039876324422,1.71390590642282,3.53389665522582,6.98197555525238,5.36734637702124,5.51531271966013,4.40463523997555,2.93680877595932,5.06901559745603,3.42904348098504,4.39140689291566,5.2091337055676,2.51264699101243,5.06486349028512,4.43114918552749,4.71405736757868,3.70166370077668,3.72798891650601,8.78423842664935,4.30757892608677,3.18850937571846,5.16254326188832,11.5595126730318,7.55584468292944,5.84798775702902,7.16843019355737,3.7919993435573,6.13549161281008,4.41636207824877,7.77347063922748,6.05626705039726,3.84979432242953,10.1922095882658,0,10.6080610095495,9.88103475352884,11.1215377903252,5.25245846707676,15.018397251536,7.12522267511159,10.235634279202,8.22056791442781,7.14908041493781,7.988299949289,7.17291113527799,6.03199638382442,6.17987419335935,4.916378135277,4.42305275974937,6.47067399789637,4.85851340612866,8.24287930329878,7.45567044872489,3.51336956413857,3.97948742945565,4.59822699375465,8.74650408893218,6.59893004092748,8.38663498682227,4.49371918214468,6.8625090422794,3.76963056338593,3.47648640384553,4.34716277461562,4.98691306942944,3.73154905055843,5.29564692021645,6.22034853050465,7.32895999457657,4.62972082950243,7.026503919986,9.65588838620586,7.20248519221397,6.0281927134286,8.16437989815934,6.79002717509704,8.71426038405478,5.17406741478031,7.32931175971664,7.18603104637713,8.09375171154165,6.79506770525482,8.06337022754234,7.3132954969655,5.76189981942242,11.3449532086541,13.3420505589515,9.26452465612975,12.5031939734061,5.79952163099405,5.62862543954631,7.02242039697958,4.49814997611899,5.50939848892731,3.85667782218446,5.8133486187602,5.633741429392,4.67061369468678,5.43047504714485,4.59668899421467,3.97237166774693,3.80119967305864,3.29325172936576,2.28150911892632,2.73376933133365,6.27718135513635,2.64335026387038,4.23120906661671,8.74481827194459,8.59275685883622,12.2424088255989,7.46229041106367,5.55945109612176,6.27744566171445,7.11793592316767,5.76446341534038,6.53471542880701,5.76973768919337,4.09424582950152,8.08937467788799,4.97117514711797,5.77509692437665,7.77638393907635,8.68288695833939,11.270773567308,9.36796108088446,6.20647958936402,7.85521182771568,6.26041717530147,4.13308414342886,6.27994911365499,7.89741849099523,10.3758419480502,13.8481437744358,10.8107447312262,10.1187950573184,7.70868461276311,9.88826354984909,9.16653066413111,9.20627639842594,9.40384315295205,6.86403532970204,17.2521847832825,6.32639611036456,4.99260276983297,11.1134706296729,6.63770430031075,10.1313139486307,7.39012760666419,9.09558776498327,10.4297584922897,6.95954851678271,8.68353918667458,8.04030035720716,5.95109102215034,4.68320754858717,5.04432461139811,3.76489972402917,5.74037167166954,5.89907932976657,6.04397436530635,4.05017364028232,4.52373851817817,2.71952841909355,1.96705709207614,4.96686143348518,3.69266356971921,3.7507739709505,6.06559297893699,1.76729649043061,6.94118082715765,5.46614242015294,6.24727853425117,6.93009514062401,7.79795359288379,1.98153571552183,6.47697122679831,4.67609372658099,4.34816555741176,4.4984984299053,8.80028528291265,8.72521457969551,5.86393053672874,6.43383479592888,3.98235415019888,9.71122544619926,9.97667737983678,8.11001842950362,6.79194353625777,7.68587869859819,10.0787034335606,7.99774204850512,11.7644134866958,7.26884543252377,7.37930260024991,9.28219889233682,12.2558258071364,9.72329907769075,6.98536892426874,7.50179622610573,6.7389288784064,8.20496560969525,7.73380396829969,5.17590413494819,4.69343416127421,3.60114520468494,10.1443063105282,8.40919890001548,5.48979050766079,7.17723806645055,7.04296829618505,6.72977688954751,2.91480836629851,5.00648315428376,9.05615668228619,7.22354037871279,7.40778109478847,8.09984365120171,6.83471138605126,6.86334519619568,3.73952545986482,4.3384950220334,5.38979897837253,2.86401185404534,7.43389584915668,9.14937602070819,9.82848601478391,6.48173717644853,4.80397640241591,5.79916689454729,7.02554373665355,6.80565449158477,4.92536898508813,11.8054469486516,8.45539408026285,8.82147621659475,7.44563207056939,8.5558522871381,8.78286799648571,7.43406952159424,5.8678619322877,9.89553324814021,16.3580577304109,12.5623742829523,6.33666013767304,6.00421129193539,9.73081033392788,8.73043135901032,11.0432699531126,9.667441566044,6.55648470778174,6.25016337503838,6.64602872285597,7.06765149637033,6.70619898563999,5.44461399738939,3.99577311032985,6.5424052315424,5.2594605981706,5.21479882314986,11.9872414821995,15.0719279103919,11.5840385291214,6.76163579112667,6.00583921443782,8.79127796482872,7.71726164684637,8.02515366456581,6.21227026878773,2.30162618253588,2.86447756719698,2.23409137046794,3.42541259885321,2.2661816921691,2.02506750069542,3.60256962579376,0.906284817968409,3.10656187051092,9.3408612825759,7.98049746802062,9.21961471072325,9.23805524859517,6.28839487883947,4.96377472815038,4.4449345560323,7.82933217507798,4.49286893428541,3.53776096469316,6.08350319736575,6.41329560712659,5.43120743325318,5.89031402124797,5.6286759576501,6.66811167796303,4.86714168968393,7.5234595980845,6.59337441285291,6.32955356577908,6.51451579532289,6.03417740941747,5.24559617884106,6.54058874845478,6.11710972699649,6.09225176820071,5.48783918618318,3.94604567156764,4.48153575691344,7.2948495315506,5.93175090620871,5.71325997778268,7.36615877705441,5.26785260032284,4.62975866354739,4.24677982494508,7.48581147025307,6.01638951335235,4.97349663378993,4.19123696327079,4.17362104116759
|short_description=p1@Shq1
}}

Latest revision as of 10:21, 26 September 2015

Short description:p1@Shq1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shq1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000089245, ENSMUST00000113312, ENSMUST00000162776, ENSMUST00000170667, NM_181590, uc009dby.2, uc009dbz.2_5end
EntrezGene:Shq1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shq1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.91
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.98
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I25.82
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G626.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.37
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D98.78
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.39
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G88.71
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I611.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I58.74
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D812.24
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I97.78
kidney, embryo E15.CNhs10997.434-16F88.68
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D56.26
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F813.85
liver, embryo E13.CNhs10524.378-3H610.81
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F49.40
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B68.68
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H37.18
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G29.06
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F58.82
testis, embryo E15.CNhs11034.443-27C57.45
testis, embryo E16.CNhs11033.470-26G58.56
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D916.36
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I49.73
thymus, embryo E15.CNhs11005.430-45I28.73
thymus, embryo E16.CNhs11002.456-26C511.04
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C47.07
thymus, neonate N07.CNhs11211.713-19D36.71
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.58
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I89.34
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B44.17





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.14e-1079
endocrine system4.01e-1072
anatomical cavity3.69e-0839
subdivision of trunk4.13e-0866
gland8.41e-0865
body cavity precursor1.14e-0738
endocrine gland1.19e-0760
abdomen element1.29e-0749
abdominal segment element1.29e-0749
abdominal segment of trunk1.29e-0749
abdomen1.29e-0749
body cavity1.50e-0737
body cavity or lining1.50e-0737
trunk1.85e-0790
foregut5.91e-0780
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