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FFCP PHASE1:Mm9::chr4:131604943..131604959,-: Difference between revisions

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{{FFCP|EntrezGene=269587|HGNC=|UniProt=P48193,E9PWN5,E9Q6Q1,A2A840|association_with_transcript=33bp_to_ENSMUST00000084253,ENSMUST00000097859,ENSMUST00000105969,ENSMUST00000105981,NM_001128606,uc008val.2_5end|description=CAGE_peak_4_at_Epb4.1_5end|id=chr4:131604943..131604959,-|ontology_enrichment_celltype=CL:0000540!6.11e-08!33;CL:0000047!6.11e-08!33;CL:0000031!6.11e-08!33;CL:0000404!6.11e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-08,33;CL:0000047,2.62e-08,33;CL:0000031,2.62e-08,33;CL:0000404,2.62e-08,33;CL:0000117,9.77e-07,23;CL:0000337,9.77e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!4.31e-09!94;UBERON:0007811!2.68e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.50e-14,43;UBERON:0007811,2.31e-12,36;UBERON:0000970,6.01e-09,9;UBERON:0000019,6.01e-09,9;UBERON:0000047,6.01e-09,9;UBERON:0010312,6.01e-09,9;UBERON:0004088,6.01e-09,9;UBERON:0002104,6.01e-09,9;UBERON:0001456,6.01e-09,9;UBERON:0003072,6.01e-09,9;UBERON:0004128,6.01e-09,9;UBERON:0003071,6.01e-09,9;UBERON:0000020,2.63e-08,12;UBERON:0001032,2.63e-08,12;UBERON:0004456,2.63e-08,12;UBERON:0002346,1.11e-07,64;UBERON:0003075,1.11e-07,64;UBERON:0007284,1.11e-07,64;UBERON:0000033,2.15e-07,13;UBERON:0005085,2.15e-07,13;UBERON:0010371,6.46e-07,73;UBERON:0001444,8.91e-07,11|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.258246646883153,3.94208422024667,6.55380673701582,0.171217968225505,1.43589886191606,1.54080656938085,1.13646523144697,0.333109761815663,0.202475267389826,0,0.946386496074713,0.548457734422955,0.42438965179803,0.935476191661768,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,1.51004345451963,1.45072428402269,1.34437519656986,0.514518872071894,0.286533439938757,0,2.83243045203437,3.70293685490423,5.07065122804943,0,0,0,0.988866362566974,0,0.299600110518405,0,1.97010263386108,1.89008313664367,2.10324961351382,1.42825492201902,1.54607978666129,1.46988959057945,2.1086003624012,0,0,0.383062014255563,0.307213066512487,3.95658863190582,2.47016637726506,2.6045668527838,0.837548997004143,1.68828783009504,0.45839474333043,0.883885756421003,1.42371680799103,2.79599168737951,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0.253359865475099,0,0.34255163915718,2.07150306917737,0,1.04091196059682,0.608930956624282,0,0.60289056221049,0.352766121407114,0,0,0.144599356919912,0,0.647067399789637,0,0,0,9.9545470983926,7.54008144528438,0,0,0,0.127070227073065,0.748953197024114,0,1.25654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,1.2220723662038,0.373220911830279,0.505445516867349,2.31486041475121,2.86264974517948,1.37941262660084,2.88099407688559,2.41127708537144,8.02830689985669,6.53379973452734,6.55912071918102,7.24369438069244,2.80238390812695,1.70195472151037,2.46331573829528,1.7535658594206,2.22437799380478,0,0.823128545631774,2.38841120182192,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0,0.700592054203017,0,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,0,1.85228302282712,0,0,2.77274725695804,1.85789337488351,0.902072229254653,0.605050573870028,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0,0.199141273254367,1.89667900953082,1.94222471436539,0,0.610953983535943,0.969762435838129,1.33258057791605,0.505892296994058,0.442830443938806,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0.575392274901621,0.648540907100142,0,0,0,0,0.252578877947112,0,0.482443521363367,1.29327233116623,1.51593129416388,1.79261474086228,1.86719594352707,0.469380496577004,0.670025029767263,0.714130922658041,1.17080188714679,1.26108115284953,1.10732344824387,0.478364305972461,1.80249646187312,0.863424909329478,2.74833211304872,1.50791283939272,0,0.491764273019036,0,0.321101179975584,0.703270119553219,0.327869890753351,0.252470927204373,2.52406575533005,3.90438744296638,1.50796378412959,1.19484398976276,0.445597348164788,0.849229592366497,1.61924280669958,0.584511715822624,1.18586333383957,0.963963949265421,0.141940085208269,0.712262414669021,1.95464351224291,0.824850614862677,0,1.69946445308487,0.302323556964751,0.754420319023592,0,0.307435147943927,1.29214146584111,0.727067458955011,1.06949213515416,1.26414703174326,0,0,0.340439605753788,3.6012218806262,1.94038025674132,1.50035924522115,2.12808280370728,1.07021290561242,0.658196082408484,0.608929898229199,0,0.42366414172764,2.42581237860458,0.32977250588296,1.13025098687134,0.361877549568935,0,0.328281799490123,0,0.370850604021019,0.341741761595705,0.82554747185289,0.185194527369712,0.376736914009382,0,0.228778173206523,1.01987057996313,0.559805809294632,0.690999869022119,0,1.42351197111511,1.82987520414164,0.756037385752609,0.418176592028937,0.436725127492355,0.134864346384821,0.41326727862668,1.04702376793612,0,0,0.56369293868419,1.64468200648377,0.330916980914195,1.16670713006429,1.03327858782185,0.844780627453891,0.821500670520278,0.651021924219751,0.524296722128554,0,0,4.10814456816632,0.405450430580328,0.616265742988964,0.649604114888975,1.61124026100733,1.58945083825012,1.9231271923195,1.77227432609493,1.81739609906666,1.98137697303,2.01652370273681,3.80085734885034,2.30908419936791,4.44132228289962,0.226730383615211,0.887943813496259,0.448569283047378,0.335769232728157,0.386379188064381,0,0.183151624267265,0,3.51100472824754,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0,5.70830411712972,2.79317411380722,1.36586884603307,1.45864030240976,1.46729213839588,0.735374033800057,0,0.412070114477788,0.64183841918363,0,0.760437899670719,0.754505365544305,1.40462261204824,1.08842759088278,0.861532034334199,0.952587382566147,0.811190281613988,0.578727661391115,2.47251540481984,0.588795680537589,0.342869252385415,1.77475806159337,1.43061713968393,1.16277133305863,0.376437521661322,1.09998990259179,0.365855945745545,0.263069711437843,1.22223702461276,0,0.593175090620871,0.788035859004508,0,0.619747364743864,1.92906610981141,1.24905288968973,1.87145286756327,0.859484216193193,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p4@Epb4.1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269587
|HGNC=
|TSSclassifier=NA
|UniProt=P48193,E9PWN5,E9Q6Q1,A2A840
|association_with_transcript=33bp_to_ENSMUST00000084253,ENSMUST00000097859,ENSMUST00000105969,ENSMUST00000105981,NM_001128606,uc008val.2_5end
|cluster_id=chr4:131604943..131604959,-
|description=CAGE_peak_4_at_Epb4.1_5end
|id=chr4:131604943..131604959,-
|ontology_enrichment_celltype=CL:0000540!6.11e-08!33;CL:0000047!6.11e-08!33;CL:0000031!6.11e-08!33;CL:0000404!6.11e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000540,2.62e-08,33;CL:0000047,2.62e-08,33;CL:0000031,2.62e-08,33;CL:0000404,2.62e-08,33;CL:0000117,9.77e-07,23;CL:0000337,9.77e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.31e-09!94;UBERON:0007811!2.68e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000153,2.50e-14,43;UBERON:0007811,2.31e-12,36;UBERON:0000970,6.01e-09,9;UBERON:0000019,6.01e-09,9;UBERON:0000047,6.01e-09,9;UBERON:0010312,6.01e-09,9;UBERON:0004088,6.01e-09,9;UBERON:0002104,6.01e-09,9;UBERON:0001456,6.01e-09,9;UBERON:0003072,6.01e-09,9;UBERON:0004128,6.01e-09,9;UBERON:0003071,6.01e-09,9;UBERON:0000020,2.63e-08,12;UBERON:0001032,2.63e-08,12;UBERON:0004456,2.63e-08,12;UBERON:0002346,1.11e-07,64;UBERON:0003075,1.11e-07,64;UBERON:0007284,1.11e-07,64;UBERON:0000033,2.15e-07,13;UBERON:0005085,2.15e-07,13;UBERON:0010371,6.46e-07,73;UBERON:0001444,8.91e-07,11
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0.258246646883153,3.94208422024667,6.55380673701582,0.171217968225505,1.43589886191606,1.54080656938085,1.13646523144697,0.333109761815663,0.202475267389826,0,0.946386496074713,0.548457734422955,0.42438965179803,0.935476191661768,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.279972843250725,0,1.51004345451963,1.45072428402269,1.34437519656986,0.514518872071894,0.286533439938757,0,2.83243045203437,3.70293685490423,5.07065122804943,0,0,0,0.988866362566974,0,0.299600110518405,0,1.97010263386108,1.89008313664367,2.10324961351382,1.42825492201902,1.54607978666129,1.46988959057945,2.1086003624012,0,0,0.383062014255563,0.307213066512487,3.95658863190582,2.47016637726506,2.6045668527838,0.837548997004143,1.68828783009504,0.45839474333043,0.883885756421003,1.42371680799103,2.79599168737951,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0,0.253359865475099,0,0.34255163915718,2.07150306917737,0,1.04091196059682,0.608930956624282,0,0.60289056221049,0.352766121407114,0,0,0.144599356919912,0,0.647067399789637,0,0,0,9.9545470983926,7.54008144528438,0,0,0,0.127070227073065,0.748953197024114,0,1.25654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,1.2220723662038,0.373220911830279,0.505445516867349,2.31486041475121,2.86264974517948,1.37941262660084,2.88099407688559,2.41127708537144,8.02830689985669,6.53379973452734,6.55912071918102,7.24369438069244,2.80238390812695,1.70195472151037,2.46331573829528,1.7535658594206,2.22437799380478,0,0.823128545631774,2.38841120182192,0,0,0,0.621377317606506,1.17263029990548,0.36012412292203,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0,0.700592054203017,0,0.32833492815819,0.162137619091711,0.438599962275997,0,0.268412837520744,0,1.85228302282712,0,0,2.77274725695804,1.85789337488351,0.902072229254653,0.605050573870028,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0,0,0,0.199141273254367,1.89667900953082,1.94222471436539,0,0.610953983535943,0.969762435838129,1.33258057791605,0.505892296994058,0.442830443938806,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0.575392274901621,0.648540907100142,0,0,0,0,0.252578877947112,0,0.482443521363367,1.29327233116623,1.51593129416388,1.79261474086228,1.86719594352707,0.469380496577004,0.670025029767263,0.714130922658041,1.17080188714679,1.26108115284953,1.10732344824387,0.478364305972461,1.80249646187312,0.863424909329478,2.74833211304872,1.50791283939272,0,0.491764273019036,0,0.321101179975584,0.703270119553219,0.327869890753351,0.252470927204373,2.52406575533005,3.90438744296638,1.50796378412959,1.19484398976276,0.445597348164788,0.849229592366497,1.61924280669958,0.584511715822624,1.18586333383957,0.963963949265421,0.141940085208269,0.712262414669021,1.95464351224291,0.824850614862677,0,1.69946445308487,0.302323556964751,0.754420319023592,0,0.307435147943927,1.29214146584111,0.727067458955011,1.06949213515416,1.26414703174326,0,0,0.340439605753788,3.6012218806262,1.94038025674132,1.50035924522115,2.12808280370728,1.07021290561242,0.658196082408484,0.608929898229199,0,0.42366414172764,2.42581237860458,0.32977250588296,1.13025098687134,0.361877549568935,0,0.328281799490123,0,0.370850604021019,0.341741761595705,0.82554747185289,0.185194527369712,0.376736914009382,0,0.228778173206523,1.01987057996313,0.559805809294632,0.690999869022119,0,1.42351197111511,1.82987520414164,0.756037385752609,0.418176592028937,0.436725127492355,0.134864346384821,0.41326727862668,1.04702376793612,0,0,0.56369293868419,1.64468200648377,0.330916980914195,1.16670713006429,1.03327858782185,0.844780627453891,0.821500670520278,0.651021924219751,0.524296722128554,0,0,4.10814456816632,0.405450430580328,0.616265742988964,0.649604114888975,1.61124026100733,1.58945083825012,1.9231271923195,1.77227432609493,1.81739609906666,1.98137697303,2.01652370273681,3.80085734885034,2.30908419936791,4.44132228289962,0.226730383615211,0.887943813496259,0.448569283047378,0.335769232728157,0.386379188064381,0,0.183151624267265,0,3.51100472824754,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0,0,5.70830411712972,2.79317411380722,1.36586884603307,1.45864030240976,1.46729213839588,0.735374033800057,0,0.412070114477788,0.64183841918363,0,0.760437899670719,0.754505365544305,1.40462261204824,1.08842759088278,0.861532034334199,0.952587382566147,0.811190281613988,0.578727661391115,2.47251540481984,0.588795680537589,0.342869252385415,1.77475806159337,1.43061713968393,1.16277133305863,0.376437521661322,1.09998990259179,0.365855945745545,0.263069711437843,1.22223702461276,0,0.593175090620871,0.788035859004508,0,0.619747364743864,1.92906610981141,1.24905288968973,1.87145286756327,0.859484216193193,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p4@Epb4.1
}}

Latest revision as of 10:35, 26 September 2015

Short description:p4@Epb4.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Epb4.1_5end
Coexpression cluster:NA
Association with transcript: 33bp_to_ENSMUST00000084253, ENSMUST00000097859, ENSMUST00000105969, ENSMUST00000105981, NM_001128606, uc008val.2_5end
EntrezGene:Epb4.1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Epb4.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.62e-0833
neuronal stem cell2.62e-0833
neuroblast2.62e-0833
electrically signaling cell2.62e-0833
CNS neuron (sensu Vertebrata)9.77e-0723
neuroblast (sensu Vertebrata)9.77e-0723

Uber anatomy
Ontology termp-valuen
anterior region of body2.50e-1443
craniocervical region2.31e-1236
eye6.01e-099
camera-type eye6.01e-099
simple eye6.01e-099
immature eye6.01e-099
ocular region6.01e-099
visual system6.01e-099
face6.01e-099
optic cup6.01e-099
optic vesicle6.01e-099
eye primordium6.01e-099
sense organ2.63e-0812
sensory system2.63e-0812
entire sense organ system2.63e-0812
neurectoderm1.11e-0764
neural plate1.11e-0764
presumptive neural plate1.11e-0764
head2.15e-0713
ectodermal placode2.15e-0713
ecto-epithelium6.46e-0773
subdivision of head8.91e-0711
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