FFCP PHASE1:Mm9::chr1:137715289..137715300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16763 | |EntrezGene=16763 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2586 | |||
|TSSclassifier=NA | |||
|UniProt=P57016 | |UniProt=P57016 | ||
|association_with_transcript=114bp_to_ENSMUST00000038760,NM_133664,uc007ctt.1_5end | |association_with_transcript=114bp_to_ENSMUST00000038760,NM_133664,uc007ctt.1_5end | ||
|cluster_id=chr1:137715289..137715300,+ | |||
|description=CAGE_peak_6_at_Lad1_5end | |description=CAGE_peak_6_at_Lad1_5end | ||
|id=chr1:137715289..137715300,+ | |id=chr1:137715289..137715300,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.81e-07,3;CL:0002202,5.81e-07,3;CL:0000069,5.81e-07,3;CL:0002632,5.81e-07,3;CL:0002368,5.81e-07,3;CL:0000307,5.81e-07,3;CL:0000377,5.81e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,2.49e-11,22;UBERON:0000014,4.76e-11,5;UBERON:0001003,4.76e-11,5;UBERON:0002097,4.76e-11,5;UBERON:0002199,4.76e-11,5;UBERON:0007029,4.76e-11,5;UBERON:0007376,4.76e-11,5;UBERON:0002416,4.76e-11,5;UBERON:0007383,4.76e-11,5;UBERON:0000161,9.81e-11,5;UBERON:0005409,9.01e-08,47;UBERON:0003126,5.81e-07,3;UBERON:0001005,5.81e-07,3;UBERON:0007196,5.81e-07,3;UBERON:0001558,5.81e-07,3;UBERON:0000162,7.59e-07,3;UBERON:0001353,7.59e-07,3;UBERON:0000163,7.59e-07,3;UBERON:0006866,7.59e-07,3;UBERON:0001046,7.59e-07,3;UBERON:0000164,7.59e-07,3;UBERON:0000931,7.59e-07,3;UBERON:0007023,8.19e-07,51 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,0.60492842261366,0,1.34303417529512,0.934450562382103,0.516493293766305,0.281577444303333,0.234064526321993,0.856089841127525,1.19658238493005,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,1.07735616342945,1.90023419456374,0.252030129759931,1.10865255327652,0,0,0,2.59966457776147,1.82858109894342,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,3.46385665617943,4.05375784760158,3.0331466700887,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0.248813941220186,1.26361379216837,1.47309299120532,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.879755620819744,0,0.834141747676794,2.089512999133,2.26360350048738,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0.213288250535234,0,0.38660238396628,0.605050573870028,0,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0,0.19496408711912,0,0.648414149624083,1.1948476395262,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,1.32849133181642,2.66897837330337,2.83813477020141,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.469380496577004,0.670025029767263,0,0.585400943573396,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.863424909329478,0.144649058581512,0,0,1.47529281905711,3.31124095565679,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.517434735131018,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0.63549621259146,1.54369878638473,7.91454014119104,3.71368181400583,3.86002719540197,8.95292580023523,8.20704498725306,0.582961673259701,0,0,0,0,0.188368457004691,0,0,0,0,0,2.86401185404534,0,0.406638934253697,1.94409613479242,2.09088296014469,2.40198820120795,1.75323650300267,1.32245529160537,1.57053565190418,2.07383957266869,7.45607175704311,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0,0,0.240390899039938,0.443068581523732,0.201932899896295,0.304827226619999,0.100826185136841,0.487289403698762,0.481059208201647,0.350630706544707,10.4295976462997,2.88581739386284,0.717710852875806,1.51096154727671,4.63655025677257,2.064507229963,3.84618410961257,12.862102744744,4.01257683228291,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.628839487883947,0.919217542250071,0,0,0.64183841918363,0,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.229741875822453,0.952587382566147,0,1.15745532278223,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.338458431566706,0.548783918618318,0,0.543216455383447,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,1.54325288784913,0.249810577937946,0.935726433781634,0.644613162144895,0.765153328275374,1.54413993383661,0.231867835620421 | |phase1_expression=0.480446541314382,0,0.454999239389536,0.60492842261366,0,1.34303417529512,0.934450562382103,0.516493293766305,0.281577444303333,0.234064526321993,0.856089841127525,1.19658238493005,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,1.07735616342945,1.90023419456374,0.252030129759931,1.10865255327652,0,0,0,2.59966457776147,1.82858109894342,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,3.46385665617943,4.05375784760158,3.0331466700887,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.203678727700633,0.248813941220186,1.26361379216837,1.47309299120532,0,0,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.879755620819744,0,0.834141747676794,2.089512999133,2.26360350048738,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0.213288250535234,0,0.38660238396628,0.605050573870028,0,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0,0.19496408711912,0,0.648414149624083,1.1948476395262,0.379335801906163,0.114248512609729,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,1.32849133181642,2.66897837330337,2.83813477020141,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.469380496577004,0.670025029767263,0,0.585400943573396,0.472905432318573,0.221464689648775,0.318909537314974,0.163863314715738,0.863424909329478,0.144649058581512,0,0,1.47529281905711,3.31124095565679,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0,0.517434735131018,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0.63549621259146,1.54369878638473,7.91454014119104,3.71368181400583,3.86002719540197,8.95292580023523,8.20704498725306,0.582961673259701,0,0,0,0,0.188368457004691,0,0,0,0,0,2.86401185404534,0,0.406638934253697,1.94409613479242,2.09088296014469,2.40198820120795,1.75323650300267,1.32245529160537,1.57053565190418,2.07383957266869,7.45607175704311,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0.608175645870493,0.102710957164827,0.25984164595559,0,0,0.240390899039938,0.443068581523732,0.201932899896295,0.304827226619999,0.100826185136841,0.487289403698762,0.481059208201647,0.350630706544707,10.4295976462997,2.88581739386284,0.717710852875806,1.51096154727671,4.63655025677257,2.064507229963,3.84618410961257,12.862102744744,4.01257683228291,0,0.460325236507177,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0.628839487883947,0.919217542250071,0,0,0.64183841918363,0,0.25347929989024,0.377252682772152,0.561849044819294,0.576226371643824,0.229741875822453,0.952587382566147,0,1.15745532278223,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.338458431566706,0.548783918618318,0,0.543216455383447,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.464810523557898,1.54325288784913,0.249810577937946,0.935726433781634,0.644613162144895,0.765153328275374,1.54413993383661,0.231867835620421 | ||
|short_description=p6@Lad1 | |short_description=p6@Lad1 | ||
}} | }} |
Latest revision as of 10:56, 26 September 2015
Short description: | p6@Lad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2586 |
Association with transcript: | 114bp_to_ENSMUST00000038760, NM_133664, uc007ctt.1_5end |
EntrezGene: | Lad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.81e-07 | 3 |
epithelial cell of tracheobronchial tree | 5.81e-07 | 3 |
branched duct epithelial cell | 5.81e-07 | 3 |
epithelial cell of lower respiratory tract | 5.81e-07 | 3 |
respiratory epithelial cell | 5.81e-07 | 3 |
tracheal epithelial cell | 5.81e-07 | 3 |
tracheoblast | 5.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 2.49e-11 | 22 |
zone of skin | 4.76e-11 | 5 |
skin epidermis | 4.76e-11 | 5 |
skin of body | 4.76e-11 | 5 |
integument | 4.76e-11 | 5 |
surface | 4.76e-11 | 5 |
outer epithelium | 4.76e-11 | 5 |
integumental system | 4.76e-11 | 5 |
enveloping layer of ectoderm | 4.76e-11 | 5 |
orifice | 9.81e-11 | 5 |
gastrointestinal system | 9.01e-08 | 47 |
trachea | 5.81e-07 | 3 |
respiratory airway | 5.81e-07 | 3 |
tracheobronchial tree | 5.81e-07 | 3 |
lower respiratory tract | 5.81e-07 | 3 |
cloaca | 7.59e-07 | 3 |
anal region | 7.59e-07 | 3 |
embryonic cloaca | 7.59e-07 | 3 |
terminal part of digestive tract | 7.59e-07 | 3 |
hindgut | 7.59e-07 | 3 |
primitive urogenital sinus | 7.59e-07 | 3 |
proctodeum | 7.59e-07 | 3 |
adult organism | 8.19e-07 | 51 |