FFCP PHASE1:Mm9::chr17:36266450..36266453,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr17:36266450..36266453,- to FFCP PHASE1:Mm9::chr17:36266450..36266453,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=630294 | |EntrezGene=630294 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=Q0WXH6 | |UniProt=Q0WXH6 | ||
|association_with_transcript=-80bp_to_ENSMUST00000097143,ENSMUST00000172968,ENSMUST00000173322,NM_001177467,uc012ash.1,uc012asl.1_5end | |||
|cluster_id=chr17:36266450..36266453,- | |||
|description=CAGE_peak_2_at_Gm7030_5end | |||
|id=chr17:36266450..36266453,- | |||
|ontology_enrichment_celltype=CL:0000239!9.57e-19!6;CL:0000677!9.57e-19!6;CL:0000212!9.57e-19!6;CL:0000584!9.57e-19!6;CL:0000075!5.52e-16!7;CL:0002563!2.67e-12!9;CL:0002251!2.67e-12!9;CL:0000473!8.96e-11!3;CL:0000627!8.96e-11!3;CL:0000682!8.96e-11!3;CL:0000066!4.63e-09!25;CL:0002076!3.97e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.82e-11,6;CL:0000677,6.82e-11,6;CL:0000584,6.82e-11,6;CL:0000075,1.78e-09,7;CL:0002563,1.40e-07,9;CL:0002251,1.40e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.22e-29!15;UBERON:0001242!2.73e-23!13;UBERON:0000060!2.73e-23!13;UBERON:0001262!2.73e-23!13;UBERON:0004786!2.73e-23!13;UBERON:0004923!2.36e-17!24;UBERON:0000160!1.26e-13!43;UBERON:0003350!2.67e-12!9;UBERON:0004808!2.67e-12!9;UBERON:0001277!2.67e-12!9;UBERON:0005409!1.92e-10!59;UBERON:0000331!2.00e-10!3;UBERON:0002116!2.00e-10!3;UBERON:0001204!2.00e-10!3;UBERON:0001168!2.00e-10!3;UBERON:0000485!5.98e-10!11;UBERON:0001007!1.77e-08!128;UBERON:0001555!1.77e-08!128;UBERON:0007026!1.77e-08!128;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0001962!8.64e-08!2;UBERON:0001961!8.64e-08!2;UBERON:0001744!8.64e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.27e-24,15;UBERON:0001242,1.60e-18,13;UBERON:0001262,1.60e-18,13;UBERON:0004786,1.60e-18,13;UBERON:0004923,1.32e-15,24;UBERON:0003199,1.33e-15,1;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2;UBERON:0000160,4.27e-08,31;UBERON:0003350,1.40e-07,9;UBERON:0004808,1.40e-07,9;UBERON:0001277,1.40e-07,9 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,4.83942738090928,4.00716583957078,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,1.14014051673824,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,4.83942738090928,4.00716583957078,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,1.14014051673824,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Gm7030 | |||
}} | }} |
Latest revision as of 11:09, 26 September 2015
Short description: | p2@Gm7030 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm7030_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | -80bp_to_ENSMUST00000097143, ENSMUST00000172968, ENSMUST00000173322, NM_001177467, uc012ash.1, uc012asl.1_5end |
EntrezGene: | Gm7030 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.82e-11 | 6 |
gut absorptive cell | 6.82e-11 | 6 |
enterocyte | 6.82e-11 | 6 |
columnar/cuboidal epithelial cell | 1.78e-09 | 7 |
intestinal epithelial cell | 1.40e-07 | 9 |
epithelial cell of alimentary canal | 1.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.27e-24 | 15 |
intestinal mucosa | 1.60e-18 | 13 |
wall of intestine | 1.60e-18 | 13 |
gastrointestinal system mucosa | 1.60e-18 | 13 |
organ component layer | 1.32e-15 | 24 |
egg chamber | 1.33e-15 | 1 |
gut-associated lymphoid tissue | 1.81e-08 | 2 |
mucosa-associated lymphoid tissue | 1.81e-08 | 2 |
lymphoid tissue | 1.81e-08 | 2 |
intestine | 4.27e-08 | 31 |
epithelium of mucosa | 1.40e-07 | 9 |
gastrointestinal system epithelium | 1.40e-07 | 9 |
intestinal epithelium | 1.40e-07 | 9 |