FFCP PHASE1:Mm9::chr17:46298023..46298034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56055 | |EntrezGene=56055 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA45 | |UniProt=E9QA45 | ||
|association_with_transcript=8bp_to_ENSMUST00000172170_5end | |association_with_transcript=8bp_to_ENSMUST00000172170_5end | ||
|cluster_id=chr17:46298023..46298034,+ | |||
|description=CAGE_peak_4_at_Gtpbp2_5end | |description=CAGE_peak_4_at_Gtpbp2_5end | ||
|id=chr17:46298023..46298034,+ | |id=chr17:46298023..46298034,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.79e-09,6;CL:0000677,2.79e-09,6;CL:0000584,2.79e-09,6;CL:0000075,9.29e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.86e-07!24 | |ontology_enrichment_uberon=UBERON:0004923!1.86e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.64e-12,15;UBERON:0004923,1.32e-11,24;UBERON:0000160,3.83e-11,31;UBERON:0005409,1.97e-10,47;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0001007,5.98e-08,116;UBERON:0001555,5.98e-08,116;UBERON:0007026,5.98e-08,116;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0004921,6.49e-07,114 | |||
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|phase1_expression=1.28119077683835,13.6100408979351,15.0149748998547,12.7034968748869,11.0197060588196,3.18970616632591,2.56973904655078,0.645616617207881,0.140788722151667,0.468129052643987,0.34243593645101,0.319088635981346,1.02720437958723,0.34968160967599,0.999329285446988,6.68168382386426,6.99561878128147,0.473193248037357,0.959801035240171,1.27316895539409,1.36069264241712,0.198581902401771,0.261199789138935,2.07990149631429,2.52350209173887,9.76194338995534,9.04600191934057,7.11055067863434,2.85035129184561,3.2763916868791,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0,0,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,0.971020706062307,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0.279972843250725,0,1.51004345451963,0.725362142011344,1.00828139742739,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0.899899717281399,0,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.662605622854841,0.489963196859816,0.287536413054709,0,0,0.638436690425939,0.153606533256243,0.395658863190582,0.457438218012048,0.52091337055676,0.279182999001381,0,0.30559649555362,0.589257170947335,0.427115042397309,0,0.530083353332288,0.226714680320357,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0.896053774194671,0.561777680527007,0.340860645156116,0.519572009205738,0,0.422530259330042,0,0,14.2213340630666,0,0,0,1.02765491747154,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0.251333182659351,0.988779870937496,0.144599356919912,0.884610551949874,0.970601099684455,0.662524555381181,0.969750506270444,0,0,0.209446706813455,2.29911349687732,0.239630249011841,0.599902730993408,0.381210681219194,0,0.457500602818626,0.125654352112864,0.347648640384553,0.511430914660661,0,0.648965052271031,0.101839363850316,0.995255764880744,0.758168275301024,0.631325567659422,0,0.689706313300419,0.180062129805349,0.452114453507145,0.408218994907967,0,1.21812241927647,0,0.215567992932842,0.567318240503458,0.175951124163949,1.09597866213787,0,1.39300866608867,0.61734640922383,0.59710280045548,0,0.51469581422943,0.284163499395593,0.828503090142008,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.462801338662135,0,0.536546802799238,0.467061369468678,0.822799249567402,0.492502392237286,1.21603214318784,1.16959989940266,0.878200461164203,0.805238512562231,0.210289948564127,0.308713837137853,3.96502539580558,1.85115396664481,0,0.464473343720877,0,0.605050573870028,0.667134131534611,0.380451252225118,1.89811624617805,0.658795818896044,1.00534083520108,2.18852119245266,1.55971269695296,0,2.37751854862164,1.39398891278057,0.379335801906163,0.456994050438915,1.1270773567308,0.203651327845314,0.387904974335251,0.49095073923223,0.379419222745544,0.147610147979602,0.470996183524124,0,0.592905254174298,0.83422552858047,0.196558995113203,0.224862112384854,1.01430060694251,0.482354319504834,1.52775511068852,0.863088412352432,0.648540907100142,0.823684239564244,1.43768206527355,0,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,0.184753190166605,1.13694847062291,0.162964976442026,0.678980343100753,0.469380496577004,0.167506257441816,1.19021820443007,0.975668239288994,0.315270288212382,0.8858587585951,0.797273843287435,0.327726629431476,0.345369963731791,1.15719246865209,0,0.54390568381871,0.491764273019036,0.551873492609465,0.481651769963376,0.234423373184406,0.327869890753351,1.00988370881749,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0.534196811001766,0,0,0,0,0.906970670894253,0,1.18120757152309,0,2.06742634534577,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0.428674070063185,0.886701168211368,0.356737635204141,0.822745103010605,0.304464949114599,0.23467170806371,0.63549621259146,0.661585194164886,0.32977250588296,0.807322133479528,0.603129249281559,1.43246812803764,0.820704498725306,1.7488850197791,0,2.22132145037209,0.82554747185289,0.740778109478847,2.0720530270516,2.46049609897845,2.74533807847827,0.679913719975421,0.139951452323658,0.552799895217695,0.954670618015114,0.632671987162271,0,0.216010681643603,0.627264888043406,0.218362563746178,0.539457385539283,0.991841468704031,0.523511883968059,4.40690909192096,0,12.9649375897364,0.299033092087958,0.165458490457098,0.583353565032143,0.387479470433193,1.01373675294467,0.58678619322877,0.39061315453185,0.629156066554265,0.241584120826006,2.88030006257865,0.948033361884535,0,0.308132871494482,0.129920822977795,1.07416017400489,0.993406773906324,1.08175904567972,1.32920574457119,1.00966449948148,0.609654453239999,0.806609481094724,1.26695244961678,1.25075394132428,1.28564592399726,1.36038230169127,0.221985953374065,0.448569283047378,0,0,0.375364950902364,1.09890974560359,0,3.00943262421218,0,0,0,0.171853182343688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| ||
|short_description=p4@Gtpbp2 | |short_description=p4@Gtpbp2 | ||
}} | }} |
Latest revision as of 13:24, 26 September 2015
Short description: | p4@Gtpbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gtpbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 8bp_to_ENSMUST00000172170_5end |
EntrezGene: | Gtpbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.79e-09 | 6 |
gut absorptive cell | 2.79e-09 | 6 |
enterocyte | 2.79e-09 | 6 |
columnar/cuboidal epithelial cell | 9.29e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.64e-12 | 15 |
organ component layer | 1.32e-11 | 24 |
intestine | 3.83e-11 | 31 |
gastrointestinal system | 1.97e-10 | 47 |
intestinal mucosa | 1.17e-09 | 13 |
wall of intestine | 1.17e-09 | 13 |
gastrointestinal system mucosa | 1.17e-09 | 13 |
digestive system | 5.98e-08 | 116 |
digestive tract | 5.98e-08 | 116 |
primitive gut | 5.98e-08 | 116 |
endoderm-derived structure | 1.25e-07 | 118 |
endoderm | 1.25e-07 | 118 |
presumptive endoderm | 1.25e-07 | 118 |
subdivision of digestive tract | 6.49e-07 | 114 |