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FFCP PHASE1:Mm9::chr17:53618827..53618836,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=271457
|EntrezGene=271457
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CQD1,Q4VAA1
|UniProt=Q9CQD1,Q4VAA1
|association_with_transcript=268bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end
|association_with_transcript=268bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end
|cluster_id=chr17:53618827..53618836,+
|description=CAGE_peak_6_at_Rab5a_5end
|description=CAGE_peak_6_at_Rab5a_5end
|id=chr17:53618827..53618836,+
|id=chr17:53618827..53618836,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,2.73e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.31e-07!15;UBERON:0007023!4.75e-07!51;UBERON:0001242!8.87e-07!13;UBERON:0000060!8.87e-07!13;UBERON:0001262!8.87e-07!13;UBERON:0004786!8.87e-07!13
|ontology_enrichment_uberon=UBERON:0000344!1.31e-07!15;UBERON:0007023!4.75e-07!51;UBERON:0001242!8.87e-07!13;UBERON:0000060!8.87e-07!13;UBERON:0001262!8.87e-07!13;UBERON:0004786!8.87e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.36e-10,31;UBERON:0000344,9.90e-09,15;UBERON:0005409,2.43e-08,47;UBERON:0007023,6.69e-08,51;UBERON:0001242,9.47e-08,13;UBERON:0001262,9.47e-08,13;UBERON:0004786,9.47e-08,13;UBERON:0004119,2.07e-07,118;UBERON:0000925,2.07e-07,118;UBERON:0006595,2.07e-07,118;UBERON:0001007,8.77e-07,116;UBERON:0001555,8.77e-07,116;UBERON:0007026,8.77e-07,116
|phase1_expression=0.640595388419176,7.32848356042658,6.3699893514535,4.53696316960245,8.5152274090879,2.51818907867835,3.73780224952841,0.774739940649458,3.09735188733667,6.08567768437183,0.171217968225505,0.319088635981346,0.856003649656029,0.524522414513984,0.333109761815663,1.01237633694913,0.699561878128147,0.157731082679119,0.274228867211478,0,0.935476191661768,0.496454756004426,0.522399578277871,3.35984087866154,3.44113921600755,6.89078356938024,9.90752591165872,6.24866574789078,7.9809836171677,6.5527833737582,4.21287970245079,0,0,0,1.44425809875637,1.49611180822643,1.42918549383658,2.09265815368454,0.7813353445238,1.0470474879476,1.76469446409304,1.36609096991689,2.91306211818692,2.89562681343828,3.64956952390252,1.28482726513177,0.782391344348039,0.436050312760893,1.09843091367236,2.13872888981712,0.139986421625363,0,1.8456086666351,1.45072428402269,2.68875039313971,1.54355661621568,1.14613375975503,2.06268836910977,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0.768436610643109,0,0.405017814995072,0.210324961351382,0.856952953211411,0,0,0,0,1.10115880999389,1.65993539510744,1.53606533256243,0.263772575460388,0.182975287204819,1.56274011167028,1.67509799400829,0.56276261003168,1.68078072554491,0.883885756421003,1.28134512719193,0.372798891650601,0.832988126665025,0.831287161174641,2.02905142091174,4.30211938490693,2.719885334831,5.39703191637817,6.49776417447669,3.13618820968135,2.52799956237153,2.55645483867087,1.29893002301434,1.7666978725517,0.985903938436763,0,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,0.505524445014783,3.65388415100992,0.517875767294343,0.593768556259299,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,0.823120949949934,1.75933227861546,3.95511948374998,1.15679485535929,1.76922110389975,1.45590164952668,1.76673214768315,0.484875253135222,3.72783522436244,0.292780797011547,1.67557365450764,4.59822699375465,1.31796636956512,0,1.27070227073065,1.49790639404823,1.37250180845588,0.628271760564322,2.08589184230732,2.81287003063364,1.24672826735736,2.92034273521964,0.305518091550949,1.49288364732112,1.51633655060205,1.89397670297827,0,0.459804208866946,0.360124259610698,0.753524089178575,0.340182495756639,0.640568601424249,0.468508622798644,1.03481348295606,0.431135985865684,0.378212160335639,0.703804496655795,0.43839146485515,0.278047249225598,6.268538997399,4.93877127379064,1.19420560091096,0,0.772043721344145,1.13665399758237,0.414251545071004,0.469052119962192,0,0.710234206755631,0.393528463494808,0.154267112887378,0,0.536546802799238,0.817357396570186,0.987359099480883,0.820837320395476,0.405344047729279,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,0.308713837137853,16.8513579321737,2.11560453330835,0.426576501070468,0.464473343720877,0.77320476793256,0.605050573870028,0.667134131534611,2.66315876557583,7.11793592316767,2.30578536613615,3.01602250560323,2.78539060857611,2.72949721966768,2.69645822596266,5.18731319699266,6.96994456390285,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,1.1221731182451,1.26473074248515,1.32849133181642,1.41298855057237,1.1105744752962,5.63259991465583,1.00107063429656,0.589676985339609,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0,0.486405680325106,1.37280706594041,0,2.97712758134803,3.74445207737473,3.78868316920668,2.33216637578486,3.37710464954357,1.66277871149944,0.757965647081939,0.977789858652155,0.339490171550376,0.704070744865506,0.837531287209079,0,1.36593553500459,0.472905432318573,0.221464689648775,1.11618338060241,2.29408640602033,0.863424909329478,1.44649058581512,0,2.17562273527484,3.93411418415229,1.10374698521893,1.12385412991454,1.64096361229084,0.983609672260053,1.26235463602186,0.94652465824877,0.780877488593277,1.29254038639679,1.43381278771531,0.891194696329576,0.566153061577665,1.21443210502468,0.292255857911312,0.395287777946524,0,0.567760340833074,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,1.09060118843252,0,2.52829406348653,6.32511651449993,0,0.340439605753788,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.535106452806212,0.164549020602121,0.304464949114599,3.05073220482823,3.1774810629573,6.17479514553893,3.13283880588812,9.36493674836252,3.98065304525829,4.65552141612232,4.10352249362653,4.95517422270746,0.18542530201051,0.512612642393558,0,0.185194527369712,0.376736914009382,0.410082683163076,0.228778173206523,2.88963330989554,2.37917468950219,0.967399816630967,5.72802370809068,0.158167996790568,0.813277868507395,0.86404272657441,2.50905955217362,5.02233896616208,5.66430254816247,2.97552440611209,8.11443420150492,2.98114438571124,4.97071450469541,1.69107881605257,0.299033092087958,0.165458490457098,0.388902376688095,0.904118764344118,0.337912250981556,0.821500670520278,0.5208175393758,0.419437377702843,1.69108884578204,0.576060012515731,0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|phase1_expression=0.640595388419176,7.32848356042658,6.3699893514535,4.53696316960245,8.5152274090879,2.51818907867835,3.73780224952841,0.774739940649458,3.09735188733667,6.08567768437183,0.171217968225505,0.319088635981346,0.856003649656029,0.524522414513984,0.333109761815663,1.01237633694913,0.699561878128147,0.157731082679119,0.274228867211478,0,0.935476191661768,0.496454756004426,0.522399578277871,3.35984087866154,3.44113921600755,6.89078356938024,9.90752591165872,6.24866574789078,7.9809836171677,6.5527833737582,4.21287970245079,0,0,0,1.44425809875637,1.49611180822643,1.42918549383658,2.09265815368454,0.7813353445238,1.0470474879476,1.76469446409304,1.36609096991689,2.91306211818692,2.89562681343828,3.64956952390252,1.28482726513177,0.782391344348039,0.436050312760893,1.09843091367236,2.13872888981712,0.139986421625363,0,1.8456086666351,1.45072428402269,2.68875039313971,1.54355661621568,1.14613375975503,2.06268836910977,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0,0.768436610643109,0,0.405017814995072,0.210324961351382,0.856952953211411,0,0,0,0,1.10115880999389,1.65993539510744,1.53606533256243,0.263772575460388,0.182975287204819,1.56274011167028,1.67509799400829,0.56276261003168,1.68078072554491,0.883885756421003,1.28134512719193,0.372798891650601,0.832988126665025,0.831287161174641,2.02905142091174,4.30211938490693,2.719885334831,5.39703191637817,6.49776417447669,3.13618820968135,2.52799956237153,2.55645483867087,1.29893002301434,1.7666978725517,0.985903938436763,0,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,0.505524445014783,3.65388415100992,0.517875767294343,0.593768556259299,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,0.823120949949934,1.75933227861546,3.95511948374998,1.15679485535929,1.76922110389975,1.45590164952668,1.76673214768315,0.484875253135222,3.72783522436244,0.292780797011547,1.67557365450764,4.59822699375465,1.31796636956512,0,1.27070227073065,1.49790639404823,1.37250180845588,0.628271760564322,2.08589184230732,2.81287003063364,1.24672826735736,2.92034273521964,0.305518091550949,1.49288364732112,1.51633655060205,1.89397670297827,0,0.459804208866946,0.360124259610698,0.753524089178575,0.340182495756639,0.640568601424249,0.468508622798644,1.03481348295606,0.431135985865684,0.378212160335639,0.703804496655795,0.43839146485515,0.278047249225598,6.268538997399,4.93877127379064,1.19420560091096,0,0.772043721344145,1.13665399758237,0.414251545071004,0.469052119962192,0,0.710234206755631,0.393528463494808,0.154267112887378,0,0.536546802799238,0.817357396570186,0.987359099480883,0.820837320395476,0.405344047729279,0.584799949701329,0.439100230582101,0.536825675041487,1.68231958851302,0.308713837137853,16.8513579321737,2.11560453330835,0.426576501070468,0.464473343720877,0.77320476793256,0.605050573870028,0.667134131534611,2.66315876557583,7.11793592316767,2.30578536613615,3.01602250560323,2.78539060857611,2.72949721966768,2.69645822596266,5.18731319699266,6.96994456390285,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,1.1221731182451,1.26473074248515,1.32849133181642,1.41298855057237,1.1105744752962,5.63259991465583,1.00107063429656,0.589676985339609,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0,0.486405680325106,1.37280706594041,0,2.97712758134803,3.74445207737473,3.78868316920668,2.33216637578486,3.37710464954357,1.66277871149944,0.757965647081939,0.977789858652155,0.339490171550376,0.704070744865506,0.837531287209079,0,1.36593553500459,0.472905432318573,0.221464689648775,1.11618338060241,2.29408640602033,0.863424909329478,1.44649058581512,0,2.17562273527484,3.93411418415229,1.10374698521893,1.12385412991454,1.64096361229084,0.983609672260053,1.26235463602186,0.94652465824877,0.780877488593277,1.29254038639679,1.43381278771531,0.891194696329576,0.566153061577665,1.21443210502468,0.292255857911312,0.395287777946524,0,0.567760340833074,0.35613120733451,0.651547837414304,1.15479086080775,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,1.09060118843252,0,2.52829406348653,6.32511651449993,0,0.340439605753788,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.535106452806212,0.164549020602121,0.304464949114599,3.05073220482823,3.1774810629573,6.17479514553893,3.13283880588812,9.36493674836252,3.98065304525829,4.65552141612232,4.10352249362653,4.95517422270746,0.18542530201051,0.512612642393558,0,0.185194527369712,0.376736914009382,0.410082683163076,0.228778173206523,2.88963330989554,2.37917468950219,0.967399816630967,5.72802370809068,0.158167996790568,0.813277868507395,0.86404272657441,2.50905955217362,5.02233896616208,5.66430254816247,2.97552440611209,8.11443420150492,2.98114438571124,4.97071450469541,1.69107881605257,0.299033092087958,0.165458490457098,0.388902376688095,0.904118764344118,0.337912250981556,0.821500670520278,0.5208175393758,0.419437377702843,1.69108884578204,0.576060012515731,0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|short_description=p6@Rab5a
|short_description=p6@Rab5a
}}
}}

Latest revision as of 16:23, 26 September 2015

Short description:p6@Rab5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Rab5a_5end
Coexpression cluster:NA
Association with transcript: 268bp_to_ENSMUST00000017975, NM_025887, uc008czn.1_5end
EntrezGene:Rab5a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Rab5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I316.85
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H33.98
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B415.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.73e-0725

Uber anatomy
Ontology termp-valuen
intestine7.36e-1031
mucosa9.90e-0915
gastrointestinal system2.43e-0847
adult organism6.69e-0851
intestinal mucosa9.47e-0813
wall of intestine9.47e-0813
gastrointestinal system mucosa9.47e-0813
endoderm-derived structure2.07e-07118
endoderm2.07e-07118
presumptive endoderm2.07e-07118
digestive system8.77e-07116
digestive tract8.77e-07116
primitive gut8.77e-07116
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