FFCP PHASE1:Mm9::chr7:3503498..3503510,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245126 | |EntrezGene=245126 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt=B6A8R8 | |UniProt=B6A8R8 | ||
|association_with_transcript=-65bp_to_NM_177363,uc009euz.1,uc009eva.1_5end | |association_with_transcript=-65bp_to_NM_177363,uc009euz.1,uc009eva.1_5end | ||
|cluster_id=chr7:3503498..3503510,- | |||
|description=CAGE_peak_2_at_Tarm1_5end | |description=CAGE_peak_2_at_Tarm1_5end | ||
|id=chr7:3503498..3503510,- | |id=chr7:3503498..3503510,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.38e-15,3;DOID:4045,1.38e-15,3;DOID:0050686,4.92e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.07e-14,3;UBERON:0001962,4.69e-10,2;UBERON:0001961,4.69e-10,2;UBERON:0001744,4.69e-10,2;UBERON:0003887,1.39e-07,10;UBERON:0002106,1.66e-07,6;UBERON:0004457,1.66e-07,6;UBERON:0000042,1.66e-07,6;UBERON:0004854,1.66e-07,6;UBERON:0009034,1.66e-07,6;UBERON:0002095,1.66e-07,6;UBERON:0004782,1.66e-07,6;UBERON:0003281,1.66e-07,6;UBERON:0009664,1.66e-07,6;UBERON:0002296,1.66e-07,6;UBERON:0005602,1.66e-07,6;UBERON:0001179,1.66e-07,6;UBERON:0006293,1.66e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0.137114433605739,0.42438965179803,0.0850432901510698,0.0992909512008853,0,2.55987876469451,1.83527424853736,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,62.3612129797993,52.3494680830946,43.9759944937991,77.6465564200939,77.8671852852628,34.9567454182431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0.461230994512117,0,0,0,0,0.144599356919912,7.07688441559899,0.161766849947409,1.54589062922275,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,1.15078454980324,0.162135226775035,0,0,0.744281895337007,0,0,0,0,2.21703828199926,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0,0.863424909329478,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.65954501176592,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,2.56306321196779,1.65109494370578,6.48180845793991,0.376736914009382,0.410082683163076,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0.596044064343795,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,6.00231461421384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0.137114433605739,0.42438965179803,0.0850432901510698,0.0992909512008853,0,2.55987876469451,1.83527424853736,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,62.3612129797993,52.3494680830946,43.9759944937991,77.6465564200939,77.8671852852628,34.9567454182431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0.461230994512117,0,0,0,0,0.144599356919912,7.07688441559899,0.161766849947409,1.54589062922275,0.969750506270444,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.11491850037158,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,1.02891068203972,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,1.15078454980324,0.162135226775035,0,0,0.744281895337007,0,0,0,0,2.21703828199926,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.221464689648775,0.159454768657487,0,0.863424909329478,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.65954501176592,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0,0.18542530201051,2.56306321196779,1.65109494370578,6.48180845793991,0.376736914009382,0.410082683163076,0,0,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0.25984164595559,0,0.596044064343795,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0,6.00231461421384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.377252682772152,0,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p2@Tarm1 | |short_description=p2@Tarm1 | ||
}} | }} |
Latest revision as of 16:34, 26 September 2015
Short description: | p2@Tarm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tarm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -65bp_to_NM_177363, uc009euz.1, uc009eva.1_5end |
EntrezGene: | Tarm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.07e-14 | 3 |
gut-associated lymphoid tissue | 4.69e-10 | 2 |
mucosa-associated lymphoid tissue | 4.69e-10 | 2 |
lymphoid tissue | 4.69e-10 | 2 |
intraembryonic coelom | 1.39e-07 | 10 |
spleen | 1.66e-07 | 6 |
cavity lining | 1.66e-07 | 6 |
serous membrane | 1.66e-07 | 6 |
gastrointestinal system mesentery | 1.66e-07 | 6 |
stomach region | 1.66e-07 | 6 |
mesentery | 1.66e-07 | 6 |
gastrointestinal system serosa | 1.66e-07 | 6 |
mesentery of stomach | 1.66e-07 | 6 |
gut mesentery | 1.66e-07 | 6 |
dorsal mesentery | 1.66e-07 | 6 |
dorsal mesogastrium | 1.66e-07 | 6 |
peritoneal cavity | 1.66e-07 | 6 |
spleen primordium | 1.66e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.38e-15 | 3 |
muscle cancer | 1.38e-15 | 3 |
organ system cancer | 4.92e-08 | 6 |