FFCP PHASE2:Mm9::chr1:165243591..165243625,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:18933 |HGNC= |MCL_coexpression_id=681 |TSSclassifier=NA |UniProt=uniprot:G3UZ44,uniprot:P63013 |association_with_tr...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=18933 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=681 | |MCL_coexpression_id=681 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=G3UZ44,P63013 | ||
|association_with_transcript=155bp_to_NM_001025570,NM_011127,NM_175686,uc007dhh.1,uc007dhi.1,uc007dhk.1_5end | |association_with_transcript=155bp_to_NM_001025570,NM_011127,NM_175686,uc007dhh.1,uc007dhi.1,uc007dhk.1_5end | ||
|cluster_id=chr1:165243591..165243625,- | |cluster_id=chr1:165243591..165243625,- | ||
Latest revision as of 16:35, 26 September 2015
| Short description: | p2@Prrx1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Prrx1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:681 |
| Association with transcript: | 155bp_to_NM_001025570, NM_011127, NM_175686, uc007dhh.1, uc007dhi.1, uc007dhk.1_5end |
| EntrezGene: | Prrx1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Prrx1 |
|---|
0
50
100
150
200
250
300
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 2.30e-09 | 22 |
| appendage girdle complex | 2.17e-08 | 13 |
| pectoral complex | 3.97e-08 | 8 |
| appendage | 6.46e-08 | 12 |
| paired limb/fin | 6.46e-08 | 12 |
| limb | 6.46e-08 | 12 |
| paired limb/fin bud | 6.46e-08 | 12 |
| limb bud | 6.46e-08 | 12 |
| limb/fin field | 6.46e-08 | 12 |
| limb field | 6.46e-08 | 12 |
Showing 1 to 10 of 15 entries
