FFCP PHASE1:Mm9::chr7:4289312..4289338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17086 | |EntrezGene=17086 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C567 | |UniProt=Q8C567 | ||
|association_with_transcript=0bp_to_ENSMUST00000006792,NM_010746,uc009exi.1_5end | |association_with_transcript=0bp_to_ENSMUST00000006792,NM_010746,uc009exi.1_5end | ||
|cluster_id=chr7:4289312..4289338,+ | |||
|description=CAGE_peak_1_at_Ncr1_5end | |description=CAGE_peak_1_at_Ncr1_5end | ||
|id=chr7:4289312..4289338,+ | |id=chr7:4289312..4289338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.65e-09,6;CL:0000556,2.65e-09,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-09!51;UBERON:0000077!9.79e-09!97;UBERON:0001041!4.50e-08!92;UBERON:0002405!4.95e-08!70;UBERON:0003104!1.93e-07!131;UBERON:0009142!1.93e-07!131;UBERON:0005057!1.95e-07!51;UBERON:0004119!2.29e-07!130;UBERON:0000925!2.29e-07!130;UBERON:0006595!2.29e-07!130;UBERON:0003887!2.59e-07!10;UBERON:0001007!3.96e-07!128;UBERON:0001555!3.96e-07!128;UBERON:0007026!3.96e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003887,4.90e-15,10;UBERON:0002106,1.47e-12,6;UBERON:0004457,1.47e-12,6;UBERON:0000042,1.47e-12,6;UBERON:0004854,1.47e-12,6;UBERON:0009034,1.47e-12,6;UBERON:0002095,1.47e-12,6;UBERON:0004782,1.47e-12,6;UBERON:0003281,1.47e-12,6;UBERON:0009664,1.47e-12,6;UBERON:0002296,1.47e-12,6;UBERON:0005602,1.47e-12,6;UBERON:0001179,1.47e-12,6;UBERON:0006293,1.47e-12,6;UBERON:0007023,6.24e-08,51;UBERON:0009569,1.07e-07,66;UBERON:0004175,1.49e-07,9;UBERON:0005172,8.49e-07,49;UBERON:0005173,8.49e-07,49;UBERON:0002417,8.49e-07,49;UBERON:0000916,8.49e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0,0,1.33243904726265,1.82227740650843,0,11.8298312009339,11.2433835556706,5.94145512517242,0.680346321208558,1.09220046320974,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,10.8753911131812,1.33597925158342,0,0,0,0.150722640552623,0.117588707135705,0,0,1.73519228303894,6.19227386364912,0.161766849947409,0.662524555381181,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,1.7416975885413,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,1.1858105083486,0,0,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.162135226775035,1.64736847912849,0,4.09355042435354,2.18426371180192,1.01031551178845,0.358794827043824,0,7.39012760666419,0,0,0,0,0,0,0,0.945810864637146,0,0.637819074629948,4.26044618260919,2.41758974612254,2.74833211304872,0,0,2.45882136509518,2.20749397043786,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,1.97964147567043,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0,0,0,0,0,0,0,1.87737366450968,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0.18542530201051,5.80960994712699,1.03193433981611,2.59272338317596,2.0720530270516,3.00727300986255,3.20289442489132,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.518459893167171,2.4853572523477,0,0,0,0,0,0,0.234714477291508,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,1.54066435747241,1.03936658382236,0.537080087002444,1.19208812868759,0.841368146639782,0.295379054349154,0.605798699688886,0.533447646584999,0.302478555410522,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,4.31669693537719,4.57879060668163,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0,0,0,0,0,1.33243904726265,1.82227740650843,0,11.8298312009339,11.2433835556706,5.94145512517242,0.680346321208558,1.09220046320974,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.7127581957859,10.8753911131812,1.33597925158342,0,0,0,0.150722640552623,0.117588707135705,0,0,1.73519228303894,6.19227386364912,0.161766849947409,0.662524555381181,1.45462575940567,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,1.7416975885413,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,1.05780226665418,0,0,0,0,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,1.1858105083486,0,0,0,0.405720242777006,0,0.25462585178142,0.287696137450811,0.162135226775035,1.64736847912849,0,4.09355042435354,2.18426371180192,1.01031551178845,0.358794827043824,0,7.39012760666419,0,0,0,0,0,0,0,0.945810864637146,0,0.637819074629948,4.26044618260919,2.41758974612254,2.74833211304872,0,0,2.45882136509518,2.20749397043786,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,1.97964147567043,0,0.242780636154981,0,0,0,0,0.258428293168221,0,1.06949213515416,0.948110273807448,0,0,0.340439605753788,0,0,0,0,0,0,0,1.87737366450968,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0.18542530201051,5.80960994712699,1.03193433981611,2.59272338317596,2.0720530270516,3.00727300986255,3.20289442489132,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.518459893167171,2.4853572523477,0,0,0,0,0,0,0.234714477291508,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,1.54066435747241,1.03936658382236,0.537080087002444,1.19208812868759,0.841368146639782,0.295379054349154,0.605798699688886,0.533447646584999,0.302478555410522,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,0.386379188064381,4.31669693537719,4.57879060668163,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p1@Ncr1 | |short_description=p1@Ncr1 | ||
}} | }} |
Latest revision as of 17:31, 26 September 2015
Short description: | p1@Ncr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ncr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000006792, NM_010746, uc009exi.1_5end |
EntrezGene: | Ncr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.65e-09 | 6 |
megakaryocyte | 2.65e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
intraembryonic coelom | 4.90e-15 | 10 |
spleen | 1.47e-12 | 6 |
cavity lining | 1.47e-12 | 6 |
serous membrane | 1.47e-12 | 6 |
gastrointestinal system mesentery | 1.47e-12 | 6 |
stomach region | 1.47e-12 | 6 |
mesentery | 1.47e-12 | 6 |
gastrointestinal system serosa | 1.47e-12 | 6 |
mesentery of stomach | 1.47e-12 | 6 |
gut mesentery | 1.47e-12 | 6 |
dorsal mesentery | 1.47e-12 | 6 |
dorsal mesogastrium | 1.47e-12 | 6 |
peritoneal cavity | 1.47e-12 | 6 |
spleen primordium | 1.47e-12 | 6 |
adult organism | 6.24e-08 | 51 |
subdivision of trunk | 1.07e-07 | 66 |
internal genitalia | 1.49e-07 | 9 |
abdomen element | 8.49e-07 | 49 |
abdominal segment element | 8.49e-07 | 49 |
abdominal segment of trunk | 8.49e-07 | 49 |
abdomen | 8.49e-07 | 49 |