FFCP PHASE1:Mm9::chr12:71554108..71554152,+: Difference between revisions
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{{FFCP|EntrezGene=72736|HGNC=|UniProt=Q8VBT0|association_with_transcript=0bp_to_NM_028339,uc007ntu.1_5end|description=CAGE_peak_1_at_Tmx1_5end|id=chr12:71554108..71554152,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.43e-12!85;UBERON:0002100!3.75e-12!98;UBERON:0009569!1.00e-11!66;UBERON:0005172!1.41e-11!49;UBERON:0005173!1.41e-11!49;UBERON:0002417!1.41e-11!49;UBERON:0000916!1.41e-11!49;UBERON:0000926!6.68e-10!193;UBERON:0004120!6.68e-10!193;UBERON:0006603!6.68e-10!193;UBERON:0002365!1.63e-09!25;UBERON:0002330!1.63e-09!25;UBERON:0009854!2.36e-09!23;UBERON:0009856!2.36e-09!23;UBERON:0002107!2.67e-09!22;UBERON:0007499!2.67e-09!22;UBERON:0006925!2.67e-09!22;UBERON:0009497!2.67e-09!22;UBERON:0000015!2.67e-09!22;UBERON:0002423!2.67e-09!22;UBERON:0006235!2.67e-09!22;UBERON:0008835!2.67e-09!22;UBERON:0003894!2.67e-09!22;UBERON:0004161!2.67e-09!22;UBERON:0008836!2.67e-09!22;UBERON:0003104!5.62e-09!131;UBERON:0009142!5.62e-09!131;UBERON:0005256!1.15e-08!47;UBERON:0000466!1.38e-08!79;UBERON:0000481!7.61e-08!230;UBERON:0001048!1.00e-07!147;UBERON:0003914!3.49e-07!47;UBERON:0000480!8.56e-07!308;UBERON:0000467!8.56e-07!308|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.22e-13,79;UBERON:0002100,8.32e-12,90;UBERON:0009569,1.00e-11,66;UBERON:0005172,1.41e-11,49;UBERON:0005173,1.41e-11,49;UBERON:0002417,1.41e-11,49;UBERON:0000916,1.41e-11,49;UBERON:0002365,1.63e-09,25;UBERON:0002330,1.63e-09,25;UBERON:0003104,2.26e-09,61;UBERON:0009142,2.26e-09,61;UBERON:0009854,2.36e-09,23;UBERON:0009856,2.36e-09,23;UBERON:0002107,2.67e-09,22;UBERON:0007499,2.67e-09,22;UBERON:0006925,2.67e-09,22;UBERON:0009497,2.67e-09,22;UBERON:0000015,2.67e-09,22;UBERON:0002423,2.67e-09,22;UBERON:0006235,2.67e-09,22;UBERON:0008835,2.67e-09,22;UBERON:0003894,2.67e-09,22;UBERON:0004161,2.67e-09,22;UBERON:0008836,2.67e-09,22;UBERON:0005256,3.95e-08,45;UBERON:0003914,3.49e-07,47|phase1_expression=62.938496912184,24.0793031271159,26.3899558845931,27.2217790176147,23.041203577532,31.3934238475234,28.5007421526541,50.3580961422147,26.4682797645133,27.3855495796732,39.0376967554151,33.903167573018,54.2706313881922,49.3925273667335,91.6051844993072,123.104962573014,140.611937503757,45.7420139769445,49.2240816644602,54.3218754301479,28.6595887809105,36.0426152859214,34.7395719554784,44.4778935365671,45.4230376512997,26.4146703492909,32.7379117080897,28.2267314818515,58.7172366120195,53.9344477686252,52.1066700039966,17.7808588568697,16.6067492647834,15.8481681015439,39.8615235256759,43.3872424385665,36.1379760584393,84.9619210395923,88.2908939311894,100.516558842969,92.9405751089003,86.7467765897226,94.674518841075,35.2511090331616,28.0814099478055,23.8610777810186,21.1245662973971,27.6891948603167,40.8616299886118,48.2186149704223,32.4768498170841,25.8754615856949,50.3347818173209,36.9934692425786,31.2567233202492,50.1655900270097,40.9742819112422,45.3791441204149,38.4401275633236,41.7902873624906,27.2547503507657,17.2810711355257,26.6788438833342,29.6966906702862,26.6993917893083,33.3925654024667,12.583204641773,12.2949857702897,40.0241903510724,32.5364311379374,33.6519938162211,35.7063730504754,49.4745531731614,38.3396201542806,33.3542239143463,37.6879702510109,35.2370819198044,32.4325838736377,39.3232725135983,43.9181338141546,51.599030991759,42.1939830150976,35.177057874174,49.5231096827878,44.9226848463822,49.7922309450498,66.0604598907838,65.7990043763311,72.7728717931899,73.2288417434752,46.6681826809701,65.3922146505854,41.4782513561728,58.8276478885221,63.0283124924239,57.7954684355563,50.2791024071672,37.1538103220166,30.1351765339328,37.1006553235857,57.323271849109,23.0987659345772,35.6727335589304,49.7746692207332,43.514699243254,48.898454036694,44.9916756063157,45.4451841281859,61.3682784243797,48.3921373351329,55.8622752186957,57.2395099226825,59.9600292865752,76.8685466818375,54.4435714038313,51.7746356278263,72.4281255461715,40.7770186514151,90.2302762988872,54.1918947323821,66.4732970565785,69.3371611983368,54.0536107532554,39.2326267995473,43.3554683103852,41.894957054209,57.031999264818,62.3898840233144,59.7230067243404,43.1397041485889,33.8550446085784,43.6020601831639,37.0245802009549,40.6587577155226,35.1161795305657,44.6163473436334,42.5688540894322,73.2757056893448,88.4529654517861,66.0787427483528,49.8361296547155,64.3725892413724,54.1987010714101,64.0495475801789,63.6821632056429,79.8148477374614,65.1226985690115,83.5611887487021,32.9819029187249,39.3340646749064,37.6535405710851,38.140057442398,43.3753708791933,51.8895728118028,52.0628805112097,44.9817443009795,68.1146791693838,63.8222809644494,55.6960458815362,42.6679091423134,46.9052119962192,44.4753291808707,41.1935839918266,39.1560821177334,54.4562908492445,50.4598660108385,45.8747516393349,53.2449961194293,58.2541868693721,75.3528660123047,71.9891028767199,84.7959927066927,74.2079389683751,72.20305329308,38.9036404843635,55.7742999095722,54.5190991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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72736 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8VBT0 | |||
|association_with_transcript=0bp_to_NM_028339,uc007ntu.1_5end | |||
|cluster_id=chr12:71554108..71554152,+ | |||
|description=CAGE_peak_1_at_Tmx1_5end | |||
|id=chr12:71554108..71554152,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.43e-12!85;UBERON:0002100!3.75e-12!98;UBERON:0009569!1.00e-11!66;UBERON:0005172!1.41e-11!49;UBERON:0005173!1.41e-11!49;UBERON:0002417!1.41e-11!49;UBERON:0000916!1.41e-11!49;UBERON:0000926!6.68e-10!193;UBERON:0004120!6.68e-10!193;UBERON:0006603!6.68e-10!193;UBERON:0002365!1.63e-09!25;UBERON:0002330!1.63e-09!25;UBERON:0009854!2.36e-09!23;UBERON:0009856!2.36e-09!23;UBERON:0002107!2.67e-09!22;UBERON:0007499!2.67e-09!22;UBERON:0006925!2.67e-09!22;UBERON:0009497!2.67e-09!22;UBERON:0000015!2.67e-09!22;UBERON:0002423!2.67e-09!22;UBERON:0006235!2.67e-09!22;UBERON:0008835!2.67e-09!22;UBERON:0003894!2.67e-09!22;UBERON:0004161!2.67e-09!22;UBERON:0008836!2.67e-09!22;UBERON:0003104!5.62e-09!131;UBERON:0009142!5.62e-09!131;UBERON:0005256!1.15e-08!47;UBERON:0000466!1.38e-08!79;UBERON:0000481!7.61e-08!230;UBERON:0001048!1.00e-07!147;UBERON:0003914!3.49e-07!47;UBERON:0000480!8.56e-07!308;UBERON:0000467!8.56e-07!308 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.22e-13,79;UBERON:0002100,8.32e-12,90;UBERON:0009569,1.00e-11,66;UBERON:0005172,1.41e-11,49;UBERON:0005173,1.41e-11,49;UBERON:0002417,1.41e-11,49;UBERON:0000916,1.41e-11,49;UBERON:0002365,1.63e-09,25;UBERON:0002330,1.63e-09,25;UBERON:0003104,2.26e-09,61;UBERON:0009142,2.26e-09,61;UBERON:0009854,2.36e-09,23;UBERON:0009856,2.36e-09,23;UBERON:0002107,2.67e-09,22;UBERON:0007499,2.67e-09,22;UBERON:0006925,2.67e-09,22;UBERON:0009497,2.67e-09,22;UBERON:0000015,2.67e-09,22;UBERON:0002423,2.67e-09,22;UBERON:0006235,2.67e-09,22;UBERON:0008835,2.67e-09,22;UBERON:0003894,2.67e-09,22;UBERON:0004161,2.67e-09,22;UBERON:0008836,2.67e-09,22;UBERON:0005256,3.95e-08,45;UBERON:0003914,3.49e-07,47 | |||
|phase1_expression=62.938496912184,24.0793031271159,26.3899558845931,27.2217790176147,23.041203577532,31.3934238475234,28.5007421526541,50.3580961422147,26.4682797645133,27.3855495796732,39.0376967554151,33.903167573018,54.2706313881922,49.3925273667335,91.6051844993072,123.104962573014,140.611937503757,45.7420139769445,49.2240816644602,54.3218754301479,28.6595887809105,36.0426152859214,34.7395719554784,44.4778935365671,45.4230376512997,26.4146703492909,32.7379117080897,28.2267314818515,58.7172366120195,53.9344477686252,52.1066700039966,17.7808588568697,16.6067492647834,15.8481681015439,39.8615235256759,43.3872424385665,36.1379760584393,84.9619210395923,88.2908939311894,100.516558842969,92.9405751089003,86.7467765897226,94.674518841075,35.2511090331616,28.0814099478055,23.8610777810186,21.1245662973971,27.6891948603167,40.8616299886118,48.2186149704223,32.4768498170841,25.8754615856949,50.3347818173209,36.9934692425786,31.2567233202492,50.1655900270097,40.9742819112422,45.3791441204149,38.4401275633236,41.7902873624906,27.2547503507657,17.2810711355257,26.6788438833342,29.6966906702862,26.6993917893083,33.3925654024667,12.583204641773,12.2949857702897,40.0241903510724,32.5364311379374,33.6519938162211,35.7063730504754,49.4745531731614,38.3396201542806,33.3542239143463,37.6879702510109,35.2370819198044,32.4325838736377,39.3232725135983,43.9181338141546,51.599030991759,42.1939830150976,35.177057874174,49.5231096827878,44.9226848463822,49.7922309450498,66.0604598907838,65.7990043763311,72.7728717931899,73.2288417434752,46.6681826809701,65.3922146505854,41.4782513561728,58.8276478885221,63.0283124924239,57.7954684355563,50.2791024071672,37.1538103220166,30.1351765339328,37.1006553235857,57.323271849109,23.0987659345772,35.6727335589304,49.7746692207332,43.514699243254,48.898454036694,44.9916756063157,45.4451841281859,61.3682784243797,48.3921373351329,55.8622752186957,57.2395099226825,59.9600292865752,76.8685466818375,54.4435714038313,51.7746356278263,72.4281255461715,40.7770186514151,90.2302762988872,54.1918947323821,66.4732970565785,69.3371611983368,54.0536107532554,39.2326267995473,43.3554683103852,41.894957054209,57.031999264818,62.3898840233144,59.7230067243404,43.1397041485889,33.8550446085784,43.6020601831639,37.0245802009549,40.6587577155226,35.1161795305657,44.6163473436334,42.5688540894322,73.2757056893448,88.4529654517861,66.0787427483528,49.8361296547155,64.3725892413724,54.1987010714101,64.0495475801789,63.6821632056429,79.8148477374614,65.1226985690115,83.5611887487021,32.9819029187249,39.3340646749064,37.6535405710851,38.140057442398,43.3753708791933,51.8895728118028,52.0628805112097,44.9817443009795,68.1146791693838,63.8222809644494,55.6960458815362,42.6679091423134,46.9052119962192,44.4753291808707,41.1935839918266,39.1560821177334,54.4562908492445,50.4598660108385,45.8747516393349,53.2449961194293,58.2541868693721,75.3528660123047,71.9891028767199,84.7959927066927,74.2079389683751,72.20305329308,38.9036404843635,55.7742999095722,54.5190991923267,37.5519804662233,44.5772443618639,44.5894409972042,43.8149368495117,42.3535401709019,44.9203648566638,57.2579134598803,53.1472548929853,64.3972912970883,60.0691149032644,58.095289836016,64.1431846621905,54.8279839279075,56.8443071170446,59.7423819763102,27.881181440103,49.5838544726223,46.210171625963,46.636154076577,45.578834484392,42.923121772875,47.427402843193,49.3017894251871,62.1714962251844,63.7963337475709,70.5557252467414,71.2428601407722,83.1444549328849,100.963088460799,106.704423850353,105.153241652054,98.0309529358466,60.4161888646702,55.6123827838371,79.8973712377317,97.7623804386011,77.4053171150487,69.2723634314325,78.5520310415518,61.8921076650597,84.9100597599526,52.1003996269825,44.5304817660639,49.0524579090498,50.5840355610061,45.2952179196809,50.921902262312,51.655470072265,51.3201493866011,53.7535841402111,52.9300608260572,49.2715235151635,51.7808074501732,58.8855788162704,56.1238347296265,81.427293327207,54.390568381871,54.094070032094,50.496424573766,35.481680387302,45.009287651406,40.6558664534155,39.3854646438822,44.8021671571084,46.8526493155966,47.8239942966814,44.6871652171272,37.6529759199246,30.0061122636162,43.7195557808886,43.5461228287855,45.4580944638502,34.7027021735552,60.0406560430976,34.188595904113,41.861948553869,46.1916344323099,54.4255067193848,45.3999789609815,49.8833868991839,65.4459626752966,33.9597176812889,58.4126781093462,46.0002361839434,69.071408600726,65.9520150011734,70.1601602617511,51.6551182017494,57.7559042189846,79.3224281406326,53.4781449272991,35.9617140916057,60.0143698088458,82.4632086436572,71.3475270408282,83.5909024658774,48.1054619601067,54.9131796869082,66.9389343929672,46.531491989597,25.2275967000464,46.3402904617249,42.3999862244936,40.4672246170633,40.3786613372851,53.3409931032627,30.2243242277131,80.4801848557886,42.5156948004238,69.4479477636419,131.29281453227,103.750918840258,106.153072367826,53.0332701580829,56.4004352864342,56.8001892336182,50.597542754801,39.3838312008513,46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| |||
|short_description=p1@Tmx1 | |||
}} |
Latest revision as of 17:54, 26 September 2015
Short description: | p1@Tmx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmx1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_028339, uc007ntu.1_5end |
EntrezGene: | Tmx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.22e-13 | 79 |
trunk | 8.32e-12 | 90 |
subdivision of trunk | 1.00e-11 | 66 |
abdomen element | 1.41e-11 | 49 |
abdominal segment element | 1.41e-11 | 49 |
abdominal segment of trunk | 1.41e-11 | 49 |
abdomen | 1.41e-11 | 49 |
exocrine gland | 1.63e-09 | 25 |
exocrine system | 1.63e-09 | 25 |
mesenchyme | 2.26e-09 | 61 |
entire embryonic mesenchyme | 2.26e-09 | 61 |
digestive tract diverticulum | 2.36e-09 | 23 |
sac | 2.36e-09 | 23 |
liver | 2.67e-09 | 22 |
epithelial sac | 2.67e-09 | 22 |
digestive gland | 2.67e-09 | 22 |
epithelium of foregut-midgut junction | 2.67e-09 | 22 |
anatomical boundary | 2.67e-09 | 22 |
hepatobiliary system | 2.67e-09 | 22 |
foregut-midgut junction | 2.67e-09 | 22 |
hepatic diverticulum | 2.67e-09 | 22 |
liver primordium | 2.67e-09 | 22 |
septum transversum | 2.67e-09 | 22 |
liver bud | 2.67e-09 | 22 |
trunk mesenchyme | 3.95e-08 | 45 |
epithelial tube | 3.49e-07 | 47 |