FFCP PHASE1:Mm9::chr12:74647408..74647436,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:74647408..74647436,-
|short_description=p2@Tmem30b
|description=CAGE_peak_2_at_Tmem30b_5end
|association_with_transcript=-26bp_to_ENSMUST00000042975,NM_17...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=238257 | |EntrezGene=238257 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=297 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHG3,Q0VEI2 | |UniProt=Q8BHG3,Q0VEI2 | ||
|association_with_transcript=-26bp_to_ENSMUST00000042975,NM_178715,uc007nwm.1_5end | |||
|cluster_id=chr12:74647408..74647436,- | |||
|description=CAGE_peak_2_at_Tmem30b_5end | |||
|id=chr12:74647408..74647436,- | |||
|ontology_enrichment_celltype=CL:0000066!5.80e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.11e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-23!130;UBERON:0000925!1.35e-23!130;UBERON:0006595!1.35e-23!130;UBERON:0001007!5.53e-23!128;UBERON:0001555!5.53e-23!128;UBERON:0007026!5.53e-23!128;UBERON:0004921!9.67e-22!126;UBERON:0004185!9.67e-22!126;UBERON:0000160!3.46e-20!43;UBERON:0005409!6.51e-19!59;UBERON:0000344!1.40e-09!15;UBERON:0001242!1.91e-08!13;UBERON:0000060!1.91e-08!13;UBERON:0001262!1.91e-08!13;UBERON:0004786!1.91e-08!13;UBERON:0000077!3.63e-08!97;UBERON:0002108!3.96e-07!16;UBERON:0000481!4.69e-07!230;UBERON:0001041!8.58e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.42e-20,118;UBERON:0000925,9.42e-20,118;UBERON:0006595,9.42e-20,118;UBERON:0001007,3.55e-19,116;UBERON:0001555,3.55e-19,116;UBERON:0007026,3.55e-19,116;UBERON:0004921,5.39e-18,114;UBERON:0000160,1.75e-17,31;UBERON:0005409,1.44e-15,47;UBERON:0000344,4.58e-10,15;UBERON:0001242,7.29e-09,13;UBERON:0001262,7.29e-09,13;UBERON:0004786,7.29e-09,13;UBERON:0005177,3.10e-07,79;UBERON:0000485,5.29e-07,11 | |||
|phase1_expression=15.8547358633746,45.3668029931169,51.8699132904071,63.8199485857411,63.6137577031861,31.5613031194353,36.443571932902,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,47.8377344152286,44.2759912459638,43.6416292727415,44.3684856043847,39.4312355815177,82.4701640440663,55.1945984174248,37.4724563007465,0,0,0,23.9746844393558,28.4261243563022,22.8669679013853,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.659058548203415,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,2.37191172448392,0.889294796111139,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,8.69593466105033,6.88339101585109,6.79971333707751,19.9690180905992,20.7928453583254,24.1934519032561,12.6399978118577,0,0,0,42.9572430318876,0,0,0,35.2880396848279,34.7103015700885,35.8922355960496,21.8091210263405,0,0,0.520455980298408,0.913396434936424,0.691846491768175,0,0.587943535678524,0.502666365318702,131.507722834687,0.144599356919912,0,1.29413479957927,0,0,85.7402101603362,0.292780797011547,0.209446706813455,56.7114662563073,0,0,0,0,0,0,0,0,0,0,2.24046600470696,6.71797641294502,43.468314450592,54.0835569628238,0.520481771850815,0.689706313300419,0.180062129805349,1.65775299619287,0.476255494059295,0.640568601424249,0.562210347358373,10.0894314588216,2.80238390812695,3.40390944302075,2.28736461413134,2.41115305670332,4.17070873838397,3.1342694986995,5.55611768301447,2.9855140022774,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,125.228718750859,68.2282461991944,0,1.85789337488351,18.2991795077373,29.2441110703847,38.0266454974728,55.1654315726422,60.7397198776975,68.5147651651885,58.0584332328623,62.2733757488802,57.3194416130213,44.0421510240569,63.7607247130348,63.9243487146519,2.84501851429623,3.19895835307241,2.25415471346161,6.10953983535943,5.04276466635827,11.5022744620122,16.6312092636797,21.9939120489607,23.3928104483648,23.4454611451421,16.3048944897932,0.333690211432188,0.393117990226406,2.02375901146368,5.07150303471257,4.10001171579109,6.87489799809833,11.5078454980324,21.4018499343047,11.8061407670875,15.814502718009,16.0020607497456,16.2259590019572,17.9331003342449,15.0693827358406,17.8504102904446,11.8242041706627,0.947457058852424,1.14075483509418,1.35796068620151,3.05097322775053,3.68513766371995,9.28370199455454,11.1226179278945,5.35959489961049,6.86540537911202,4.46473352240964,6.882259218061,6.21665934717224,10.5593812764503,0,0,30.4893849271802,21.7990029580739,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,6.24536374916382,2.67098405500883,3.4206261464251,16.0021019283359,26.5490276679926,4.85561272309963,6.34879469625977,10.7504895460862,23.0335476447003,23.6725063916824,23.2585463851399,10.9060118843252,14.9728898921583,28.7593449721593,33.7339547439996,43.3169281642385,19.0646179222121,5.76195500900193,10.7367707539686,16.289614662401,21.4581682707151,12.4858172321449,13.9866667511803,15.22324745573,6.33613611772018,16.0992373856503,26.6839361646504,11.7069239588451,4.84393280087717,4.04096597018644,4.77489376012546,6.89391778929257,58.8791289992298,0,0,1.65109494370578,0.185194527369712,0,0,0,0,0,0,77.3283200592242,0.474503990371703,9.14937602070819,11.9885928312199,14.2180041289839,26.6402327770337,20.6342449968776,24.8786901733261,44.236754195301,87.3604919986684,61.5125919956056,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,2.604087696879,0.104859344425711,0,1.44015003128933,2.21207784439725,8.91990947276722,8.21687657318618,3.37794139742267,4.11761400035207,4.17230845040656,3.72605893511903,2.06765338044408,1.31256384932592,1.67654974641,1.71404514732629,2.0466154955348,1.25075394132428,1.5193997283604,9.29594572822367,7.99149432146633,1.34570784914214,10.744615447301,35.3536957078909,24.0233568577513,29.3042598827624,41.3730971622597,24.5770330977328,0,0,0,0,0,0,0,0,0.906284817968409,0,0.415149390336707,0.399024873401031,0.853668028770671,4.61902762429759,1.46729213839588,3.30918315210025,4.00044110042907,4.73880631649457,4.49286893428541,4.54854981174835,4.30914809813408,3.58390048633545,4.02658482120494,4.60981097315059,4.307660171671,6.19181798667996,4.86714168968393,3.8581844092741,7.00546031365621,4.56316652416632,4.11443102862498,6.56660482789549,3.81497903915713,5.37781741539616,4.6113596403512,4.65380343404221,4.75612729469209,4.99832451731901,3.53090695999241,5.05028044491965,3.91495559809775,3.94017929502254,6.95692773388472,5.26785260032284,5.98010494041538,3.99696924700713,7.25187986180766,7.73535794573874,2.29545998482612,3.52946270591225,1.39120701372253 | |phase1_expression=15.8547358633746,45.3668029931169,51.8699132904071,63.8199485857411,63.6137577031861,31.5613031194353,36.443571932902,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,47.8377344152286,44.2759912459638,43.6416292727415,44.3684856043847,39.4312355815177,82.4701640440663,55.1945984174248,37.4724563007465,0,0,0,23.9746844393558,28.4261243563022,22.8669679013853,0,0,0,0,0,0,0,0,0,3.12956537739216,0,0.659058548203415,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,2.37191172448392,0.889294796111139,0,0,0,0.599200221036809,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,8.69593466105033,6.88339101585109,6.79971333707751,19.9690180905992,20.7928453583254,24.1934519032561,12.6399978118577,0,0,0,42.9572430318876,0,0,0,35.2880396848279,34.7103015700885,35.8922355960496,21.8091210263405,0,0,0.520455980298408,0.913396434936424,0.691846491768175,0,0.587943535678524,0.502666365318702,131.507722834687,0.144599356919912,0,1.29413479957927,0,0,85.7402101603362,0.292780797011547,0.209446706813455,56.7114662563073,0,0,0,0,0,0,0,0,0,0,2.24046600470696,6.71797641294502,43.468314450592,54.0835569628238,0.520481771850815,0.689706313300419,0.180062129805349,1.65775299619287,0.476255494059295,0.640568601424249,0.562210347358373,10.0894314588216,2.80238390812695,3.40390944302075,2.28736461413134,2.41115305670332,4.17070873838397,3.1342694986995,5.55611768301447,2.9855140022774,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,125.228718750859,68.2282461991944,0,1.85789337488351,18.2991795077373,29.2441110703847,38.0266454974728,55.1654315726422,60.7397198776975,68.5147651651885,58.0584332328623,62.2733757488802,57.3194416130213,44.0421510240569,63.7607247130348,63.9243487146519,2.84501851429623,3.19895835307241,2.25415471346161,6.10953983535943,5.04276466635827,11.5022744620122,16.6312092636797,21.9939120489607,23.3928104483648,23.4454611451421,16.3048944897932,0.333690211432188,0.393117990226406,2.02375901146368,5.07150303471257,4.10001171579109,6.87489799809833,11.5078454980324,21.4018499343047,11.8061407670875,15.814502718009,16.0020607497456,16.2259590019572,17.9331003342449,15.0693827358406,17.8504102904446,11.8242041706627,0.947457058852424,1.14075483509418,1.35796068620151,3.05097322775053,3.68513766371995,9.28370199455454,11.1226179278945,5.35959489961049,6.86540537911202,4.46473352240964,6.882259218061,6.21665934717224,10.5593812764503,0,0,30.4893849271802,21.7990029580739,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,6.24536374916382,2.67098405500883,3.4206261464251,16.0021019283359,26.5490276679926,4.85561272309963,6.34879469625977,10.7504895460862,23.0335476447003,23.6725063916824,23.2585463851399,10.9060118843252,14.9728898921583,28.7593449721593,33.7339547439996,43.3169281642385,19.0646179222121,5.76195500900193,10.7367707539686,16.289614662401,21.4581682707151,12.4858172321449,13.9866667511803,15.22324745573,6.33613611772018,16.0992373856503,26.6839361646504,11.7069239588451,4.84393280087717,4.04096597018644,4.77489376012546,6.89391778929257,58.8791289992298,0,0,1.65109494370578,0.185194527369712,0,0,0,0,0,0,77.3283200592242,0.474503990371703,9.14937602070819,11.9885928312199,14.2180041289839,26.6402327770337,20.6342449968776,24.8786901733261,44.236754195301,87.3604919986684,61.5125919956056,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,2.604087696879,0.104859344425711,0,1.44015003128933,2.21207784439725,8.91990947276722,8.21687657318618,3.37794139742267,4.11761400035207,4.17230845040656,3.72605893511903,2.06765338044408,1.31256384932592,1.67654974641,1.71404514732629,2.0466154955348,1.25075394132428,1.5193997283604,9.29594572822367,7.99149432146633,1.34570784914214,10.744615447301,35.3536957078909,24.0233568577513,29.3042598827624,41.3730971622597,24.5770330977328,0,0,0,0,0,0,0,0,0.906284817968409,0,0.415149390336707,0.399024873401031,0.853668028770671,4.61902762429759,1.46729213839588,3.30918315210025,4.00044110042907,4.73880631649457,4.49286893428541,4.54854981174835,4.30914809813408,3.58390048633545,4.02658482120494,4.60981097315059,4.307660171671,6.19181798667996,4.86714168968393,3.8581844092741,7.00546031365621,4.56316652416632,4.11443102862498,6.56660482789549,3.81497903915713,5.37781741539616,4.6113596403512,4.65380343404221,4.75612729469209,4.99832451731901,3.53090695999241,5.05028044491965,3.91495559809775,3.94017929502254,6.95692773388472,5.26785260032284,5.98010494041538,3.99696924700713,7.25187986180766,7.73535794573874,2.29545998482612,3.52946270591225,1.39120701372253 | ||
|short_description=p2@Tmem30b | |||
}} | }} |
Latest revision as of 18:39, 26 September 2015
Short description: | p2@Tmem30b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem30b_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | -26bp_to_ENSMUST00000042975, NM_178715, uc007nwm.1_5end |
EntrezGene: | Tmem30b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.11e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.42e-20 | 118 |
endoderm | 9.42e-20 | 118 |
presumptive endoderm | 9.42e-20 | 118 |
digestive system | 3.55e-19 | 116 |
digestive tract | 3.55e-19 | 116 |
primitive gut | 3.55e-19 | 116 |
subdivision of digestive tract | 5.39e-18 | 114 |
intestine | 1.75e-17 | 31 |
gastrointestinal system | 1.44e-15 | 47 |
mucosa | 4.58e-10 | 15 |
intestinal mucosa | 7.29e-09 | 13 |
wall of intestine | 7.29e-09 | 13 |
gastrointestinal system mucosa | 7.29e-09 | 13 |
trunk region element | 3.10e-07 | 79 |
simple columnar epithelium | 5.29e-07 | 11 |