FFCP PHASE1:Mm9::chr2:58998895..58998938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227937 | |EntrezGene=227937 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3356 | |MCL_coexpression_id=3356 | ||
|TSSclassifier=NA | |||
|UniProt=Q68FH0,A2AS44,Q05D18,Q3UIX3,A2AS45 | |UniProt=Q68FH0,A2AS44,Q05D18,Q3UIX3,A2AS45 | ||
|association_with_transcript=0bp_to_ENSMUST00000102754,ENSMUST00000123908,ENSMUST00000128233,ENSMUST00000137790,ENSMUST00000168631,ENSMUST00000169005,NM_026361,NM_175464,uc008jsz.1,uc008jta.1,uc008jtb.1,uc008jtc.1,uc008jtd.1_5end | |association_with_transcript=0bp_to_ENSMUST00000102754,ENSMUST00000123908,ENSMUST00000128233,ENSMUST00000137790,ENSMUST00000168631,ENSMUST00000169005,NM_026361,NM_175464,uc008jsz.1,uc008jta.1,uc008jtb.1,uc008jtc.1,uc008jtd.1_5end | ||
|cluster_id=chr2:58998895..58998938,+ | |||
|description=CAGE_peak_1_at_Pkp4_5end | |description=CAGE_peak_1_at_Pkp4_5end | ||
|id=chr2:58998895..58998938,+ | |id=chr2:58998895..58998938,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.35e-09!122;UBERON:0000025!1.85e-07!114 | |ontology_enrichment_uberon=UBERON:0004111!2.35e-09!122;UBERON:0000025!1.85e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.82e-09,122;UBERON:0000025,2.18e-07,114 | |||
|phase1_expression=18.4171174170513,45.0178275854776,33.2149444754361,38.4129548359674,39.5707626657614,11.9194283057442,10.2789561862031,1.80772652818207,7.32101355188667,10.5329036844897,1.36974374580404,1.27635454392538,0.513602189793617,1.22388563386596,0.999329285446988,0.202475267389826,0.699561878128147,0.630924330716475,0.685572168028694,0,10.6304112688837,0.595745707205312,0.522399578277871,6.55968933452967,7.11168771308227,22.3950466004858,16.7997178502039,15.7293999860699,10.6413114895569,16.6339885641554,5.76499327703792,3.81018404075779,0.61506478758457,0,3.17736781726402,3.49092755252834,4.08338712524738,0,0,0,0.588231488031014,0,0,0.755380907853464,0.709638518536602,2.0190142737785,3.9119567217402,5.66865406589161,3.29529274101708,5.44403717407994,5.17949760013841,11.5002051491977,0.167782606057736,1.45072428402269,2.68875039313971,0.771778308107841,3.72493471920384,4.12537673821954,4.85559506063035,4.23192783417626,3.1691570175309,1.69422266034566,0.889294796111139,2.6996991518442,0,0.7104801149461,0.599200221036809,3.84218305321555,4.66603255388149,3.10513658162888,3.15487442027073,12.2829923293636,16.7860091123226,3.30725157880376,3.35459148563827,2.75765635983006,16.5173821499083,30.2618991261895,26.7275367865864,6.19865552331911,8.5083508550241,4.68822033501084,30.9893128891533,16.8828783009504,27.0452898564954,11.1958862479994,13.2405663143166,7.08317894136142,6.81535739998656,4.08086424576642,7.8263411949453,2.58127163094416,2.03991400112325,10.7940638327563,9.09686984426737,12.5447528387254,8.70755404816862,3.91989741929533,4.67614808285164,4.59341446863442,23.380007682929,2.56652954828636,0,7.11066703153331,4.11332977921307,5.06719730950197,3.53867111510348,15.4148237620731,1.55362730188303,4.15637989381509,4.68410382268567,3.04465478312141,3.92046345335299,3.91878865436819,5.05631440683531,4.14699751387929,4.20231445148436,8.24216334443496,0,4.52947179852746,3.3126227769059,2.90925151881133,7.45567044872489,31.3275452802355,35.6059401582874,15.5828803677241,0.718890747035522,1.19980546198682,1.14363204365758,18.574039286198,23.33253074375,6.40837195775608,18.7730265807659,17.6443665557928,24.9345653471472,22.7137768294861,9.57290020192973,5.84712761867437,9.35074206204597,9.6803253707778,6.63614259109789,5.74755261083682,7.74267158163002,9.64510834148576,16.192686798016,13.7081680704789,12.9308379892426,9.8307280880826,2.58681591519411,1.89106080167819,6.33424046990216,4.3839146485515,8.06337022754234,3.48252166522167,5.96768195583036,4.97585667046233,0.702213187313235,0.51469581422943,1.13665399758237,4.97101854085205,7.97388603935727,12.064158117888,7.33908680314152,14.9540816128027,14.3468414985262,16.9749779667798,18.5108646965737,21.8351190226607,18.1015834904828,16.7450813360677,18.8079638146385,17.5439984910399,8.34290438105992,19.1915178827332,19.9775451135921,8.64398743985989,19.1642894130603,14.8092317331585,4.05247676016945,6.27039014023184,4.38149368495117,6.85723983719365,5.55945109612176,10.2721838100782,18.506633400236,12.0230236948528,15.5827829456167,13.5290400987983,14.2323783596958,19.7740269903929,11.4553166433588,15.5330193138406,3.98302592001472,6.28366819353509,4.50830942692322,7.33144780243131,7.17624202520215,12.9751266797089,17.2635746349222,45.7591458736767,39.0926832325023,38.7467094714454,18.3800628794032,5.00535317148282,3.93117990226406,5.39669069723649,4.46292267054706,4.3411888755435,5.0925170356284,6.04161888646702,5.35046248357617,6.58947391651396,12.9391385874619,15.2577788544086,8.7370548472077,15.912469310668,9.86685774370517,20.7450714186248,8.86815312799702,6.63219941196697,7.65935389277522,11.712410918488,11.0304416695596,9.5478566741835,8.56957107189649,11.5128852236101,8.35466263762812,11.5161638617363,12.2780171866265,10.4872521418072,12.2606337124786,12.43981903801,6.03165135757089,2.17562273527484,2.45882136509518,5.24279817978992,41.1009510368747,37.507739709505,2.95082901678016,6.31177318010932,3.15508219416257,1.95219372148319,3.44677436372478,2.15071918157297,3.34198011123591,1.69845918473299,3.64329631507405,3.50707029493574,4.34816555741176,13.8168166061377,5.10984306749767,5.52003371368491,7.65568708961808,8.41347627159931,3.98235415019888,3.64170954232472,4.83717691143602,5.84675747243284,3.54362271456927,4.91896236710284,11.1124166062335,12.3601468022352,10.3384239731569,9.16506598013866,7.37930260024991,20.6271086496374,9.19186935535228,7.56256594931503,3.75140182969988,4.92975180572662,3.54680467284547,6.0645397984704,6.91105886528908,5.48036908406279,2.81606049676452,3.60114520468494,18.5243854366168,6.10079135883476,10.8181165886257,8.56443533979813,7.87857470420701,8.20704498725306,19.2377352175701,49.1377050327851,2.39219233116994,3.50857675537478,3.33350149265481,1.31857919903284,1.6403307326523,2.51655990527175,2.03974115992626,2.93898049879682,2.62579950228405,4.77335309007557,4.4287039101359,8.74273708645449,11.2325554454673,10.8725913927524,10.6997656235627,11.7331981354794,16.7786515122432,17.0141362289619,10.6284278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| |phase1_expression=18.4171174170513,45.0178275854776,33.2149444754361,38.4129548359674,39.5707626657614,11.9194283057442,10.2789561862031,1.80772652818207,7.32101355188667,10.5329036844897,1.36974374580404,1.27635454392538,0.513602189793617,1.22388563386596,0.999329285446988,0.202475267389826,0.699561878128147,0.630924330716475,0.685572168028694,0,10.6304112688837,0.595745707205312,0.522399578277871,6.55968933452967,7.11168771308227,22.3950466004858,16.7997178502039,15.7293999860699,10.6413114895569,16.6339885641554,5.76499327703792,3.81018404075779,0.61506478758457,0,3.17736781726402,3.49092755252834,4.08338712524738,0,0,0,0.588231488031014,0,0,0.755380907853464,0.709638518536602,2.0190142737785,3.9119567217402,5.66865406589161,3.29529274101708,5.44403717407994,5.17949760013841,11.5002051491977,0.167782606057736,1.45072428402269,2.68875039313971,0.771778308107841,3.72493471920384,4.12537673821954,4.85559506063035,4.23192783417626,3.1691570175309,1.69422266034566,0.889294796111139,2.6996991518442,0,0.7104801149461,0.599200221036809,3.84218305321555,4.66603255388149,3.10513658162888,3.15487442027073,12.2829923293636,16.7860091123226,3.30725157880376,3.35459148563827,2.75765635983006,16.5173821499083,30.2618991261895,26.7275367865864,6.19865552331911,8.5083508550241,4.68822033501084,30.9893128891533,16.8828783009504,27.0452898564954,11.1958862479994,13.2405663143166,7.08317894136142,6.81535739998656,4.08086424576642,7.8263411949453,2.58127163094416,2.03991400112325,10.7940638327563,9.09686984426737,12.5447528387254,8.70755404816862,3.91989741929533,4.67614808285164,4.59341446863442,23.380007682929,2.56652954828636,0,7.11066703153331,4.11332977921307,5.06719730950197,3.53867111510348,15.4148237620731,1.55362730188303,4.15637989381509,4.68410382268567,3.04465478312141,3.92046345335299,3.91878865436819,5.05631440683531,4.14699751387929,4.20231445148436,8.24216334443496,0,4.52947179852746,3.3126227769059,2.90925151881133,7.45567044872489,31.3275452802355,35.6059401582874,15.5828803677241,0.718890747035522,1.19980546198682,1.14363204365758,18.574039286198,23.33253074375,6.40837195775608,18.7730265807659,17.6443665557928,24.9345653471472,22.7137768294861,9.57290020192973,5.84712761867437,9.35074206204597,9.6803253707778,6.63614259109789,5.74755261083682,7.74267158163002,9.64510834148576,16.192686798016,13.7081680704789,12.9308379892426,9.8307280880826,2.58681591519411,1.89106080167819,6.33424046990216,4.3839146485515,8.06337022754234,3.48252166522167,5.96768195583036,4.97585667046233,0.702213187313235,0.51469581422943,1.13665399758237,4.97101854085205,7.97388603935727,12.064158117888,7.33908680314152,14.9540816128027,14.3468414985262,16.9749779667798,18.5108646965737,21.8351190226607,18.1015834904828,16.7450813360677,18.8079638146385,17.5439984910399,8.34290438105992,19.1915178827332,19.9775451135921,8.64398743985989,19.1642894130603,14.8092317331585,4.05247676016945,6.27039014023184,4.38149368495117,6.85723983719365,5.55945109612176,10.2721838100782,18.506633400236,12.0230236948528,15.5827829456167,13.5290400987983,14.2323783596958,19.7740269903929,11.4553166433588,15.5330193138406,3.98302592001472,6.28366819353509,4.50830942692322,7.33144780243131,7.17624202520215,12.9751266797089,17.2635746349222,45.7591458736767,39.0926832325023,38.7467094714454,18.3800628794032,5.00535317148282,3.93117990226406,5.39669069723649,4.46292267054706,4.3411888755435,5.0925170356284,6.04161888646702,5.35046248357617,6.58947391651396,12.9391385874619,15.2577788544086,8.7370548472077,15.912469310668,9.86685774370517,20.7450714186248,8.86815312799702,6.63219941196697,7.65935389277522,11.712410918488,11.0304416695596,9.5478566741835,8.56957107189649,11.5128852236101,8.35466263762812,11.5161638617363,12.2780171866265,10.4872521418072,12.2606337124786,12.43981903801,6.03165135757089,2.17562273527484,2.45882136509518,5.24279817978992,41.1009510368747,37.507739709505,2.95082901678016,6.31177318010932,3.15508219416257,1.95219372148319,3.44677436372478,2.15071918157297,3.34198011123591,1.69845918473299,3.64329631507405,3.50707029493574,4.34816555741176,13.8168166061377,5.10984306749767,5.52003371368491,7.65568708961808,8.41347627159931,3.98235415019888,3.64170954232472,4.83717691143602,5.84675747243284,3.54362271456927,4.91896236710284,11.1124166062335,12.3601468022352,10.3384239731569,9.16506598013866,7.37930260024991,20.6271086496374,9.19186935535228,7.56256594931503,3.75140182969988,4.92975180572662,3.54680467284547,6.0645397984704,6.91105886528908,5.48036908406279,2.81606049676452,3.60114520468494,18.5243854366168,6.10079135883476,10.8181165886257,8.56443533979813,7.87857470420701,8.20704498725306,19.2377352175701,49.1377050327851,2.39219233116994,3.50857675537478,3.33350149265481,1.31857919903284,1.6403307326523,2.51655990527175,2.03974115992626,2.93898049879682,2.62579950228405,4.77335309007557,4.4287039101359,8.74273708645449,11.2325554454673,10.8725913927524,10.6997656235627,11.7331981354794,16.7786515122432,17.0141362289619,10.6284278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| ||
|short_description=p1@Pkp4 | |short_description=p1@Pkp4 | ||
}} | }} |
Latest revision as of 19:22, 26 September 2015
Short description: | p1@Pkp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pkp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:3356 |
Association with transcript: | 0bp_to_ENSMUST00000102754, ENSMUST00000123908, ENSMUST00000128233, ENSMUST00000137790, ENSMUST00000168631, ENSMUST00000169005, NM_026361, NM_175464, uc008jsz.1, uc008jta.1, uc008jtb.1, uc008jtc.1, uc008jtd.1_5end |
EntrezGene: | Pkp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.82e-09 | 122 |
tube | 2.18e-07 | 114 |