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FFCP PHASE1:Mm9::chr4:153674138..153674188,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230972
|EntrezGene=230972
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q3U5C8
|UniProt=Q3U5C8
|association_with_transcript=0bp_to_ENSMUST00000030898_5end
|association_with_transcript=0bp_to_ENSMUST00000030898_5end
|cluster_id=chr4:153674138..153674188,-
|description=CAGE_peak_2_at_Arhgef16_5end
|description=CAGE_peak_2_at_Arhgef16_5end
|id=chr4:153674138..153674188,-
|id=chr4:153674138..153674188,-
|ontology_enrichment_celltype=CL:0000066!3.36e-07!25
|ontology_enrichment_celltype=CL:0000066!3.36e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,2.27e-08,25;CL:0002563,2.57e-07,9;CL:0002251,2.57e-07,9;CL:0000223,6.40e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.23e-23!130;UBERON:0000925!4.23e-23!130;UBERON:0006595!4.23e-23!130;UBERON:0000160!7.22e-23!43;UBERON:0001007!1.06e-22!128;UBERON:0001555!1.06e-22!128;UBERON:0007026!1.06e-22!128;UBERON:0004921!1.61e-21!126;UBERON:0004185!1.61e-21!126;UBERON:0005409!9.28e-21!59;UBERON:0000344!4.79e-10!15;UBERON:0001242!5.34e-09!13;UBERON:0000060!5.34e-09!13;UBERON:0001262!5.34e-09!13;UBERON:0004786!5.34e-09!13;UBERON:0002108!1.01e-08!16;UBERON:0000077!1.57e-07!97;UBERON:0001045!5.27e-07!13;UBERON:0005177!5.28e-07!85
|ontology_enrichment_uberon=UBERON:0004119!4.23e-23!130;UBERON:0000925!4.23e-23!130;UBERON:0006595!4.23e-23!130;UBERON:0000160!7.22e-23!43;UBERON:0001007!1.06e-22!128;UBERON:0001555!1.06e-22!128;UBERON:0007026!1.06e-22!128;UBERON:0004921!1.61e-21!126;UBERON:0004185!1.61e-21!126;UBERON:0005409!9.28e-21!59;UBERON:0000344!4.79e-10!15;UBERON:0001242!5.34e-09!13;UBERON:0000060!5.34e-09!13;UBERON:0001262!5.34e-09!13;UBERON:0004786!5.34e-09!13;UBERON:0002108!1.01e-08!16;UBERON:0000077!1.57e-07!97;UBERON:0001045!5.27e-07!13;UBERON:0005177!5.28e-07!85
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.80e-19,31;UBERON:0005409,7.70e-17,47;UBERON:0004119,1.58e-15,118;UBERON:0000925,1.58e-15,118;UBERON:0006595,1.58e-15,118;UBERON:0001007,2.03e-15,116;UBERON:0001555,2.03e-15,116;UBERON:0007026,2.03e-15,116;UBERON:0004921,2.38e-14,114;UBERON:0000344,2.12e-11,15;UBERON:0001242,3.46e-10,13;UBERON:0001262,3.46e-10,13;UBERON:0004786,3.46e-10,13;UBERON:0003350,2.57e-07,9;UBERON:0004808,2.57e-07,9;UBERON:0001277,2.57e-07,9;UBERON:0001264,4.02e-07,12
|phase1_expression=0.480446541314382,76.0766388653807,74.1648760204944,84.0850507432988,104.687207558787,24.342494427224,14.4839837169226,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,17.9191513528615,16.7468775179034,57.423196411502,34.460959692726,27.3648465511079,34.2042155021473,37.8045194639896,14.8559442139054,0,0,0,8.08784535303569,8.81043620400009,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.76694832761291,0,0,0,0,0.383062014255563,0.921639199537461,0.659431438650969,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0,0,3.18850937571846,0.860423876981386,2.03991400112325,1.61910957491345,4.54843492213368,4.48026887097336,4.49422144421606,0,0,0,2.39433813620357,0,0,0,7.14420435337007,6.58735650235256,6.0662933401774,10.5049169341535,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,14.0901131608593,0,0,0,0,0,42.8701050801681,0,0,43.4276993854605,0,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0,0,0.41557608911912,0.648965052271031,0.81471491080253,1.11966273549084,3.79084137650512,27.5678831211281,0.260240885925407,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,5.17406741478031,1.07783996466421,0.756424320671277,0.879755620819744,0.219195732427575,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,64.4316626818406,34.1141230995972,0.213288250535234,0.696710015581316,5.7990357594942,13.1094291005173,15.1217069814512,19.9736907418187,40.809499292828,23.5519505255336,25.1335208800269,22.48208134065,26.1251876739621,35.0539569375146,27.6656703839609,42.0188086566715,0.758671603812327,1.37098215131675,6.76246414038483,3.25842124552503,3.49114476901726,5.96154469067708,7.08249215791682,11.2183712464498,11.9319033159445,16.1650284737559,1.77871576252289,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.72353147925725,1.01850340712568,1.72617682470486,0.810676133875177,2.47105271869273,1.43768206527355,3.34926852901653,3.12037673114561,1.01031551178845,1.4351793081753,0.964887042726734,2.40179147216586,0.757965647081939,1.30371981153621,1.18821560042632,1.17345124144251,2.01007508930179,4.04674189506223,4.09780660501378,1.89162172927429,2.21464689648775,1.43509291791738,2.78567635016755,2.59027472798843,3.7608755231193,0,0,23.1129208318947,11.0374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.27746076687442,0.712262414669021,0.977321756121456,2.8044920905331,13.2745138339963,2.42780636154981,3.93020624054176,6.60117779145643,12.1073776081117,10.1453598821496,16.7978390559344,9.45187696641514,5.70395805415554,17.6980584444057,26.3546521437497,23.721174947083,4.76615448055303,0.720244376125241,2.71653235943784,1.92903331528433,3.01478397191865,1.42695054081656,2.30368628842969,2.13125464380219,0.469343416127421,12.4980921809654,12.7906470871878,3.79238381765404,0.322928853391811,0.844380948994182,1.19372344003136,1.64140899745061,30.8969686827642,0.18542530201051,0,0.619160603889667,0,0,0,0,0,0,0,13.3653886522116,0.632671987162271,3.45643094115643,4.32021363287205,4.39085421630384,7.86105229486239,4.31565908431426,6.61227645802687,8.63794608547298,29.6818288838206,15.5334828271731,0,0.299033092087958,0,2.52786544847262,1.93739735216597,2.02747350588934,0.821500670520278,0.5208175393758,0.314578033277133,0,0.576060012515731,1.26404448251271,2.43270258348197,1.02710957164827,2.5984164595559,0.716106782669926,0.79472541912506,1.08175904567972,0.443068581523732,1.11063094942962,1.447929326445,0.403304740547362,0.487289403698762,0.769694733122636,1.5193997283604,1.36038230169127,3.10780334723691,0.358855426437903,6.54750003819906,5.40930863290133,1.50145980360946,5.67770035228522,3.64426244434412,24.0754609936974,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0.628839487883947,2.75765262675021,1.33348036680969,1.23621034343337,1.28367683836726,1.01078884705519,1.77435509923168,1.13175804831646,1.591905626988,1.47257850531199,1.60819313075717,1.42888107384922,1.50649623728312,1.35036454324594,0.412085900803307,1.17759136107518,1.02860775715625,1.59728225543404,0.715308569841963,2.47088908274958,1.69396884747595,1.60767754994185,1.28049581010941,1.8414879800649,1.49384525230448,0.561142271657738,1.66089025373844,2.1670986122624,2.04615521584845,1.08455788830176,1.35034627686799,0.249810577937946,3.27504251823572,3.00819475667618,0,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,76.0766388653807,74.1648760204944,84.0850507432988,104.687207558787,24.342494427224,14.4839837169226,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,3.31668831589172,0,0,17.9191513528615,16.7468775179034,57.423196411502,34.460959692726,27.3648465511079,34.2042155021473,37.8045194639896,14.8559442139054,0,0,0,8.08784535303569,8.81043620400009,9.80012910059372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.76694832761291,0,0,0,0,0.383062014255563,0.921639199537461,0.659431438650969,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0,0,3.18850937571846,0.860423876981386,2.03991400112325,1.61910957491345,4.54843492213368,4.48026887097336,4.49422144421606,0,0,0,2.39433813620357,0,0,0,7.14420435337007,6.58735650235256,6.0662933401774,10.5049169341535,0,0,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,14.0901131608593,0,0,0,0,0,42.8701050801681,0,0,43.4276993854605,0,0,0,0.299581278809645,0.915001205637253,0.125654352112864,0,0,0.41557608911912,0.648965052271031,0.81471491080253,1.11966273549084,3.79084137650512,27.5678831211281,0.260240885925407,0,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.187403449119458,5.17406741478031,1.07783996466421,0.756424320671277,0.879755620819744,0.219195732427575,1.11218899690239,0.696504333044333,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.420579897128254,0,64.4316626818406,34.1141230995972,0.213288250535234,0.696710015581316,5.7990357594942,13.1094291005173,15.1217069814512,19.9736907418187,40.809499292828,23.5519505255336,25.1335208800269,22.48208134065,26.1251876739621,35.0539569375146,27.6656703839609,42.0188086566715,0.758671603812327,1.37098215131675,6.76246414038483,3.25842124552503,3.49114476901726,5.96154469067708,7.08249215791682,11.2183712464498,11.9319033159445,16.1650284737559,1.77871576252289,0.333690211432188,0.196558995113203,0.224862112384854,0.608580364165509,0.72353147925725,1.01850340712568,1.72617682470486,0.810676133875177,2.47105271869273,1.43768206527355,3.34926852901653,3.12037673114561,1.01031551178845,1.4351793081753,0.964887042726734,2.40179147216586,0.757965647081939,1.30371981153621,1.18821560042632,1.17345124144251,2.01007508930179,4.04674189506223,4.09780660501378,1.89162172927429,2.21464689648775,1.43509291791738,2.78567635016755,2.59027472798843,3.7608755231193,0,0,23.1129208318947,11.0374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.27746076687442,0.712262414669021,0.977321756121456,2.8044920905331,13.2745138339963,2.42780636154981,3.93020624054176,6.60117779145643,12.1073776081117,10.1453598821496,16.7978390559344,9.45187696641514,5.70395805415554,17.6980584444057,26.3546521437497,23.721174947083,4.76615448055303,0.720244376125241,2.71653235943784,1.92903331528433,3.01478397191865,1.42695054081656,2.30368628842969,2.13125464380219,0.469343416127421,12.4980921809654,12.7906470871878,3.79238381765404,0.322928853391811,0.844380948994182,1.19372344003136,1.64140899745061,30.8969686827642,0.18542530201051,0,0.619160603889667,0,0,0,0,0,0,0,13.3653886522116,0.632671987162271,3.45643094115643,4.32021363287205,4.39085421630384,7.86105229486239,4.31565908431426,6.61227645802687,8.63794608547298,29.6818288838206,15.5334828271731,0,0.299033092087958,0,2.52786544847262,1.93739735216597,2.02747350588934,0.821500670520278,0.5208175393758,0.314578033277133,0,0.576060012515731,1.26404448251271,2.43270258348197,1.02710957164827,2.5984164595559,0.716106782669926,0.79472541912506,1.08175904567972,0.443068581523732,1.11063094942962,1.447929326445,0.403304740547362,0.487289403698762,0.769694733122636,1.5193997283604,1.36038230169127,3.10780334723691,0.358855426437903,6.54750003819906,5.40930863290133,1.50145980360946,5.67770035228522,3.64426244434412,24.0754609936974,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.972426868273176,0.628839487883947,2.75765262675021,1.33348036680969,1.23621034343337,1.28367683836726,1.01078884705519,1.77435509923168,1.13175804831646,1.591905626988,1.47257850531199,1.60819313075717,1.42888107384922,1.50649623728312,1.35036454324594,0.412085900803307,1.17759136107518,1.02860775715625,1.59728225543404,0.715308569841963,2.47088908274958,1.69396884747595,1.60767754994185,1.28049581010941,1.8414879800649,1.49384525230448,0.561142271657738,1.66089025373844,2.1670986122624,2.04615521584845,1.08455788830176,1.35034627686799,0.249810577937946,3.27504251823572,3.00819475667618,0,0.220591419119515,0.231867835620421
|short_description=p2@Arhgef16
|short_description=p2@Arhgef16
}}
}}

Latest revision as of 19:24, 26 September 2015

Short description:p2@Arhgef16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arhgef16_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000030898_5end
EntrezGene:Arhgef16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arhgef16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I576.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I674.16
CD326+ enterocyte, pool1.CNhs13542.11848-124I384.09
CD326+ enterocyte, pool2.CNhs13197.11849-124I4104.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.75
GP2+ M cell, pool1.CNhs13228.11845-124H957.42
GP2+ M cell, pool2.CNhs13231.11846-124I134.46
GP2+ M cell, pool3.CNhs13240.11847-124I227.36
Ileum epithelium, pool1.CNhs13199.10252-104B934.20
Ileum epithelium, pool2.CNhs13232.10253-104C137.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.50
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H743.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G427.57
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I364.43
intestine, adult.CNhs10496.178-9A334.11
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D85.80
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D315.12
intestine, embryo E18.CNhs10526.1289-20F719.97
intestine, neonate N00.CNhs11126.644-26D140.81
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B825.13
intestine, neonate N07.CNhs11095.720-20F222.48
intestine, neonate N10.CNhs11098.755-23A526.13
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E327.67
intestine, neonate N30.CNhs11131.1384-42G142.02
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D57.08
kidney, neonate N20.CNhs11113.832-19I111.22
kidney, neonate N25.CNhs11122.1353-25F311.93
kidney, neonate N30.CNhs11203.1385-42H116.17
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B617.70
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I130.90
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B84.32
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I129.68
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.55
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.27e-0825
intestinal epithelial cell2.57e-079
epithelial cell of alimentary canal2.57e-079
endodermal cell6.40e-0720

Uber anatomy
Ontology termp-valuen
intestine5.80e-1931
gastrointestinal system7.70e-1747
endoderm-derived structure1.58e-15118
endoderm1.58e-15118
presumptive endoderm1.58e-15118
digestive system2.03e-15116
digestive tract2.03e-15116
primitive gut2.03e-15116
subdivision of digestive tract2.38e-14114
mucosa2.12e-1115
intestinal mucosa3.46e-1013
wall of intestine3.46e-1013
gastrointestinal system mucosa3.46e-1013
epithelium of mucosa2.57e-079
gastrointestinal system epithelium2.57e-079
intestinal epithelium2.57e-079
pancreas4.02e-0712
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