FFCP PHASE1:Mm9::chr4:154735431..154735455,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:154735431..154735455,- to FFCP PHASE1:Mm9::chr4:154735431..154735455,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18762 | |EntrezGene=18762 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=A2AD75 | |UniProt=A2AD75 | ||
|association_with_transcript=0bp_to_ENSMUST00000105624_5end | |||
|cluster_id=chr4:154735431..154735455,- | |||
|description=CAGE_peak_3_at_Prkcz_5end | |||
|id=chr4:154735431..154735455,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.14e-08,9;CL:0002251,5.14e-08,9;CL:0000239,7.90e-07,6;CL:0000677,7.90e-07,6;CL:0000584,7.90e-07,6;CL:0000075,8.68e-07,7;CL:0000066,9.45e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.61e-19!130;UBERON:0000925!5.61e-19!130;UBERON:0006595!5.61e-19!130;UBERON:0001007!5.15e-18!128;UBERON:0001555!5.15e-18!128;UBERON:0007026!5.15e-18!128;UBERON:0000160!1.91e-17!43;UBERON:0004921!4.54e-17!126;UBERON:0004185!4.54e-17!126;UBERON:0005409!2.55e-15!59;UBERON:0000344!1.24e-09!15;UBERON:0001242!8.79e-09!13;UBERON:0000060!8.79e-09!13;UBERON:0001262!8.79e-09!13;UBERON:0004786!8.79e-09!13;UBERON:0000481!9.74e-08!230;UBERON:0000464!2.85e-07!57;UBERON:0002108!4.92e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.67e-19,31;UBERON:0005409,1.78e-13,47;UBERON:0004119,4.53e-13,118;UBERON:0000925,4.53e-13,118;UBERON:0006595,4.53e-13,118;UBERON:0000344,1.07e-12,15;UBERON:0001007,4.17e-12,116;UBERON:0001555,4.17e-12,116;UBERON:0007026,4.17e-12,116;UBERON:0001242,1.58e-11,13;UBERON:0001262,1.58e-11,13;UBERON:0004786,1.58e-11,13;UBERON:0004921,3.59e-11,114;UBERON:0004923,2.74e-09,24;UBERON:0000485,5.04e-08,11;UBERON:0003350,5.14e-08,9;UBERON:0004808,5.14e-08,9;UBERON:0001277,5.14e-08,9 | |||
|phase1_expression=1.12104192973356,8.02643437570531,10.0099832665698,12.0985684522732,21.0376206577466,5.37213670118047,4.43864017131499,4.00282302668886,0.985521055061667,1.17032263160997,0.856089841127525,0.957265907944037,2.39681021903688,3.67165690159789,0,0.404950534779652,0,1.57731082679119,0.822686601634433,0.42438965179803,2.21112554392781,0,0,3.19984845586813,3.44113921600755,10.9104073181854,7.75371593086335,4.95583835177545,12.5415456841207,7.05684363327806,5.09980174507201,0,0,0,2.3108129580102,2.65975432573588,2.85837098767317,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.699932108126813,1.43752564364972,0.503347818173209,2.90144856804538,3.02484419228218,0,0,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0,0,0.30559649555362,0,0,0,0.075726193333184,0,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,1.94932925234301,1.34408066129201,1.82577746171277,0,0,0,1.26759077799012,0,0,0,2.59789249213457,2.02687892380079,0,3.4255163915718,1.8125651855302,0.29688427812965,0,0,0,0,0.117588707135705,0.251333182659351,10.3821886448437,0.433798070759735,0,0.323533699894818,0,0,0,2.04946557908083,1.04723353406728,7.66371165625774,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0.83115217823824,0.162241263067758,0.712875546952214,0.622034853050465,1.76905930903572,1.68353484709179,0.390361328888111,0.459804208866946,0.360124259610698,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,1.03481348295606,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.473489471170421,0.787056926989615,0.462801338662135,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0.420579897128254,0,7.26921322564356,2.3800550999719,0.213288250535234,0.232236671860439,1.9330119198314,3.42861991859682,4.66993892074228,7.03834816616469,5.21981967698963,6.0938613247884,7.28872105520782,5.76973768919337,4.28920991662064,2.69645822596266,3.6743468478698,4.77939055810481,0.758671603812327,0.456994050438915,3.38123207019241,1.4255592949172,2.52138233317913,3.50679099451593,3.47800954183415,4.87113488332687,5.96595165797224,10.7355532611966,2.37162101669719,0.166845105716094,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,1.5601883655728,1.26289438973556,1.79397413521912,0.482443521363367,3.51031061316549,1.13694847062291,0.325929952884052,1.18821560042632,0.938760993154008,2.1775813467436,3.80869825417622,1.56106918286239,2.67979744980525,1.55025282754142,2.07291199254733,1.3109065177259,2.76295970985433,3.03763023021174,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.712262414669021,1.30309567482861,1.64970122972535,1.32745138339963,1.21390318077491,2.11626489875326,2.26326095707078,2.95301892880773,4.30409207121498,3.10113951801865,1.81766864738753,1.06949213515416,1.58018378967908,3.16255825724996,4.12542172992747,2.7235168460303,0.720244376125241,0.776152102696527,1.50035924522115,0.886701168211368,1.96205699362278,2.30368628842969,5.48036908406279,2.3467170806371,5.08396970073168,3.08739757276947,0.49465875882444,0.484393280087717,0.422190474497091,0.835606408021955,0.656563598980245,3.78925087618806,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.457556346413045,0.169978429993855,0,0,2.86401185404534,0.632671987162271,1.62655573701479,0.756037385752609,0.836353184057875,0.655087691238533,2.42755823492677,0.909188012978695,3.66458318777641,5.05498395837992,4.34937519160848,5.07323644815771,1.04661582230785,1.32366792365678,0.777804753376191,2.0665571756437,0.337912250981556,0.704143431874524,0.5208175393758,0.943734099831398,0.241584120826006,1.72818003754719,1.26404448251271,0.405450430580328,0,0,0.716106782669926,0.39736270956253,0.841368146639782,1.03382669022204,0.504832249740738,0.381034033274999,0.604957110821043,0.974578807397524,0.865906574762965,1.28564592399726,1.36038230169127,0.887943813496259,0.62799699626633,2.3503846290971,3.28422309854724,3.19060208267009,0.549454872801795,0.643105137237198,4.51414893631827,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0,1.03017528619447,0.962757628775446,0,0.50695859978048,0,0.37456602987953,0.640251524048693,0.689225627467359,0,0.579421629724277,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.470546902076653,0.338458431566706,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,0.7746842059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| |phase1_expression=1.12104192973356,8.02643437570531,10.0099832665698,12.0985684522732,21.0376206577466,5.37213670118047,4.43864017131499,4.00282302668886,0.985521055061667,1.17032263160997,0.856089841127525,0.957265907944037,2.39681021903688,3.67165690159789,0,0.404950534779652,0,1.57731082679119,0.822686601634433,0.42438965179803,2.21112554392781,0,0,3.19984845586813,3.44113921600755,10.9104073181854,7.75371593086335,4.95583835177545,12.5415456841207,7.05684363327806,5.09980174507201,0,0,0,2.3108129580102,2.65975432573588,2.85837098767317,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.699932108126813,1.43752564364972,0.503347818173209,2.90144856804538,3.02484419228218,0,0,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.255374676170375,0,0.131886287730194,0,0.52091337055676,0,0,0.30559649555362,0,0,0,0.075726193333184,0,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,1.94932925234301,1.34408066129201,1.82577746171277,0,0,0,1.26759077799012,0,0,0,2.59789249213457,2.02687892380079,0,3.4255163915718,1.8125651855302,0.29688427812965,0,0,0,0,0.117588707135705,0.251333182659351,10.3821886448437,0.433798070759735,0,0.323533699894818,0,0,0,2.04946557908083,1.04723353406728,7.66371165625774,0,0,0,0,0.457500602818626,0,0.173824320192276,0.255715457330331,0.83115217823824,0.162241263067758,0.712875546952214,0.622034853050465,1.76905930903572,1.68353484709179,0.390361328888111,0.459804208866946,0.360124259610698,0.60281927134286,0.272145996605311,0.512454881139399,0.374806898238915,1.03481348295606,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.473489471170421,0.787056926989615,0.462801338662135,0,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0.420579897128254,0,7.26921322564356,2.3800550999719,0.213288250535234,0.232236671860439,1.9330119198314,3.42861991859682,4.66993892074228,7.03834816616469,5.21981967698963,6.0938613247884,7.28872105520782,5.76973768919337,4.28920991662064,2.69645822596266,3.6743468478698,4.77939055810481,0.758671603812327,0.456994050438915,3.38123207019241,1.4255592949172,2.52138233317913,3.50679099451593,3.47800954183415,4.87113488332687,5.96595165797224,10.7355532611966,2.37162101669719,0.166845105716094,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,1.5601883655728,1.26289438973556,1.79397413521912,0.482443521363367,3.51031061316549,1.13694847062291,0.325929952884052,1.18821560042632,0.938760993154008,2.1775813467436,3.80869825417622,1.56106918286239,2.67979744980525,1.55025282754142,2.07291199254733,1.3109065177259,2.76295970985433,3.03763023021174,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.712262414669021,1.30309567482861,1.64970122972535,1.32745138339963,1.21390318077491,2.11626489875326,2.26326095707078,2.95301892880773,4.30409207121498,3.10113951801865,1.81766864738753,1.06949213515416,1.58018378967908,3.16255825724996,4.12542172992747,2.7235168460303,0.720244376125241,0.776152102696527,1.50035924522115,0.886701168211368,1.96205699362278,2.30368628842969,5.48036908406279,2.3467170806371,5.08396970073168,3.08739757276947,0.49465875882444,0.484393280087717,0.422190474497091,0.835606408021955,0.656563598980245,3.78925087618806,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0.457556346413045,0.169978429993855,0,0,2.86401185404534,0.632671987162271,1.62655573701479,0.756037385752609,0.836353184057875,0.655087691238533,2.42755823492677,0.909188012978695,3.66458318777641,5.05498395837992,4.34937519160848,5.07323644815771,1.04661582230785,1.32366792365678,0.777804753376191,2.0665571756437,0.337912250981556,0.704143431874524,0.5208175393758,0.943734099831398,0.241584120826006,1.72818003754719,1.26404448251271,0.405450430580328,0,0,0.716106782669926,0.39736270956253,0.841368146639782,1.03382669022204,0.504832249740738,0.381034033274999,0.604957110821043,0.974578807397524,0.865906574762965,1.28564592399726,1.36038230169127,0.887943813496259,0.62799699626633,2.3503846290971,3.28422309854724,3.19060208267009,0.549454872801795,0.643105137237198,4.51414893631827,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0.415149390336707,0,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0,1.03017528619447,0.962757628775446,0,0.50695859978048,0,0.37456602987953,0.640251524048693,0.689225627467359,0,0.579421629724277,1.15745532278223,0.824171801606613,0.588795680537589,0.685738504770831,0.177475806159338,0.953744759789284,0.436039249896986,0.470546902076653,0.338458431566706,0.548783918618318,0.526139422875686,0.814824683075171,0.561142271657738,1.18635018124174,0.591026894253381,0.409231043169689,0.7746842059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| ||
|short_description=p3@Prkcz | |||
}} | }} |
Latest revision as of 19:48, 26 September 2015
Short description: | p3@Prkcz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prkcz_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000105624_5end |
EntrezGene: | Prkcz |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.14e-08 | 9 |
epithelial cell of alimentary canal | 5.14e-08 | 9 |
brush border epithelial cell | 7.90e-07 | 6 |
gut absorptive cell | 7.90e-07 | 6 |
enterocyte | 7.90e-07 | 6 |
columnar/cuboidal epithelial cell | 8.68e-07 | 7 |
epithelial cell | 9.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.67e-19 | 31 |
gastrointestinal system | 1.78e-13 | 47 |
endoderm-derived structure | 4.53e-13 | 118 |
endoderm | 4.53e-13 | 118 |
presumptive endoderm | 4.53e-13 | 118 |
mucosa | 1.07e-12 | 15 |
digestive system | 4.17e-12 | 116 |
digestive tract | 4.17e-12 | 116 |
primitive gut | 4.17e-12 | 116 |
intestinal mucosa | 1.58e-11 | 13 |
wall of intestine | 1.58e-11 | 13 |
gastrointestinal system mucosa | 1.58e-11 | 13 |
subdivision of digestive tract | 3.59e-11 | 114 |
organ component layer | 2.74e-09 | 24 |
simple columnar epithelium | 5.04e-08 | 11 |
epithelium of mucosa | 5.14e-08 | 9 |
gastrointestinal system epithelium | 5.14e-08 | 9 |
intestinal epithelium | 5.14e-08 | 9 |