Personal tools

FFCP PHASE1:Mm9::chr15:54109850..54109867,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=18383|HGNC=|MCL_coexpression_id=31|UniProt=O08712,Q3UK97|association_with_transcript=171bp_to_ENSMUST00000079772,NM_008764,uc007vrk.1_5end|description=CAGE_peak_1_at_Tnfrsf11b_5end|id=chr15:54109850..54109867,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.90e-13!130;UBERON:0000925!7.90e-13!130;UBERON:0006595!7.90e-13!130;UBERON:0001007!8.78e-12!128;UBERON:0001555!8.78e-12!128;UBERON:0007026!8.78e-12!128;UBERON:0004921!8.05e-11!126;UBERON:0004185!8.05e-11!126;UBERON:0000160!1.86e-07!43;UBERON:0005409!6.48e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.76e-11,118;UBERON:0000925,1.76e-11,118;UBERON:0006595,1.76e-11,118;UBERON:0001007,1.79e-10,116;UBERON:0001555,1.79e-10,116;UBERON:0007026,1.79e-10,116;UBERON:0004921,1.51e-09,114|phase1_expression=1.12104192973356,130.167827049482,87.8148532021805,0,0.500895729946347,84.9469115874162,175.44309308724,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,2.48227378002213,0.261199789138935,104.635044506888,146.363121320854,123.459872284729,155.505080613426,254.902468267407,4.56056206695297,2.52030129759931,316.85289972643,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,2.64383317748712,3.24406179902447,4.03802854755699,1.56478268869608,0,0.659058548203415,1.1665793944457,0.979904951377538,0,0,0,0,5.14518872071894,2.57880095944881,4.64104883049698,0.809265843438391,0.528990979272033,0.633831403506179,0,2.66788438833342,1.3498495759221,0,1.4209602298922,1.49800055259202,0.384218305321555,0.829516898467821,0.675029691658453,0.630974884054146,0.856952953211411,2.65042249141936,0.61245399607477,0.383381884072945,0,1.10115880999389,0.383062014255563,0.614426133024974,0.527545150920775,0.731901148819277,0,0.279182999001381,1.68828783009504,1.22238598221448,1.47314292736834,1.70846016958924,0.372798891650601,0.832988126665025,0.302286240427142,5.79728977403356,67.1130624045481,0,1.61910957491345,1.29955283489534,3.58421509677868,4.91555470461132,26.9279909673331,12.2099422163348,12.0135455333516,0.985903938436763,26.9485602570067,15.2883143823987,14.2213340630666,54.3392512938147,65.8735650235256,54.5966400615966,2.39786147410026,2.07150306917737,25.0867215019554,5.55153045651635,9.43842982767638,5.30415643688935,6.0289056221049,11.6412820064348,9.29932775839599,57.8436224498435,7.66376591675532,12.3845477272982,10.5148452465816,6.8460870722722,13.5765070877862,11.1835056730873,2.63502717310392,1.67557365450764,7.15279754584056,0.599075622529601,0.599902730993408,0.254140454146129,1.3481157546434,0,1.63350657746724,2.9550134432687,2.81287003063364,1.45451631191692,0.811206315338788,23.6267324132734,7.46441823660558,1.51633655060205,1.68353484709179,1.04096354370163,0.459804208866946,0.720248519221397,1.65775299619287,0.612328492361951,1.0249097622788,1.49922759295566,1.55222022443409,0.862271971731369,0.567318240503458,1.75951124163949,1.97276159184817,1.39023624612799,2.089512999133,5.14455341019859,1.79130840136644,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.710234206755631,0.196764231747404,1.69693824176116,0,1.87791380979733,0.350296027101508,2.30383789878873,2.95501435342371,0.56748166682099,0.584799949701329,2.63460138349261,0.536825675041487,0.841159794256509,2.26390147234426,1.65209391491899,4.49565963328025,4.05247676016945,4.87697010906921,10.6959992897337,9.88249270654378,12.8979265430025,17.3105319762429,10.9141684155238,27.8341233483578,21.1121575392226,24.8695590051439,21.4460495831032,19.7740269903929,12.3198688428576,6.77080329064848,1.13800740571849,2.39921876480431,0,5.29493452397817,6.98228953803453,3.85747009396752,1.45444035385792,1.18088118383682,0.627994911365499,0.740382983530803,10.9687472022245,1.00107063429656,0.982794975566015,2.9232074610031,1.42002084971952,2.41177159752417,4.07401362850272,8.91858026097513,2.7562988551756,13.453509246216,14.3768206527355,16.7463426450827,14.3537329632698,23.7424145270285,11.8402292924462,6.75420929908714,2.58654466233247,1.32643988239339,1.46668478797823,1.69745085775188,4.69380496577004,11.7254380209271,15.2347930167049,4.29294025287157,6.46304090835383,5.75808193086815,3.6674596791222,5.07976275618788,5.69860440157455,4.33947175744535,0,0,1.47529281905711,1.65562047782839,5.13761887960934,2.57865710502847,7.86887737808042,5.30188947129183,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0,1.16902343164525,1.97643888973262,1.92792789853084,5.39372323791421,10.6839362200353,14.6598263418218,15.6721616823909,3.98235415019888,1.45668381692989,0.604647113929502,1.69744571780308,5.31543407185391,8.60818414242997,15.247269296925,13.4507479906677,19.250858432775,12.3254335594968,7.37930260024991,11.3449097573006,0.340439605753788,1.26042765821917,1.94038025674132,2.35770738534752,3.72414490648775,4.63758925765383,3.9491764944509,1.522324745573,225.754183157289,414.343530609632,1.32317038832977,14.5099902588502,3.87514624070173,4.04096597018644,6.2073618881631,7.2221995887827,17.488850197791,1.48340241608408,0.170870880797853,2.68302928352189,3.1483069652851,0.565105371014073,0.27338845544205,0,3.0596117398894,1.95932033253121,2.9021994498929,9.54670618015114,1.58167996790568,1.62655573701479,3.99619761040665,3.97267762427491,10.0446779323242,19.8250589185686,20.91132429851,17.0141362289619,7.38805347763219,1.24267862617385,0,0.897099276263873,2.31641886639937,3.50012139019286,3.7456348808542,5.74450826668646,6.92407708009948,5.9894017028217,2.09718688851422,0.241584120826006,0,6.32022241256356,1.21635129174099,2.56777392912068,4.02754551231165,5.54982756569192,5.36439657909415,4.80781798079875,6.79371825003055,5.35122184725182,2.89585865288999,4.2346997757473,7.01696741326217,5.58028681513911,7.01261413089414,2.26730383615211,0,0.538283139656854,2.01461539636894,2.51146472241848,206.638405471751,6.77661009788881,11.7902608493486,2.50786052017682,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,3.60256962579376,3.17199686288943,2.5888015587591,0.31136204275253,1.99512436700516,2.39027048055788,3.40349403895612,1.88651846365184,0.735374033800057,5.33392146723877,4.32673620201678,4.81378814387723,4.04315538822076,5.57654459758527,5.65879024158229,3.65201879132541,4.09760975391163,3.21638626151434,4.76293691283074,3.82418275618023,3.27945674788299,3.29668720642645,4.85756436443511,4.11443102862498,3.54951612318675,4.05341522910446,4.50573891560218,4.04670335785922,4.48457421825885,4.75612729469209,3.94604567156764,5.02475221229689,6.73370725989286,4.50813068871862,4.23569274214923,2.04615521584845,4.33823155320705,4.43685205256625,3.2475375131933,7.48581147025307,11.1732948105115,8.99055160723564,11.6913452133343,14.3758058084661|short_description=p1@Tnfrsf11b}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18383
|HGNC=
|MCL_coexpression_id=31
|TSSclassifier=NA
|UniProt=O08712,Q3UK97
|association_with_transcript=171bp_to_ENSMUST00000079772,NM_008764,uc007vrk.1_5end
|cluster_id=chr15:54109850..54109867,-
|description=CAGE_peak_1_at_Tnfrsf11b_5end
|id=chr15:54109850..54109867,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.90e-13!130;UBERON:0000925!7.90e-13!130;UBERON:0006595!7.90e-13!130;UBERON:0001007!8.78e-12!128;UBERON:0001555!8.78e-12!128;UBERON:0007026!8.78e-12!128;UBERON:0004921!8.05e-11!126;UBERON:0004185!8.05e-11!126;UBERON:0000160!1.86e-07!43;UBERON:0005409!6.48e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.76e-11,118;UBERON:0000925,1.76e-11,118;UBERON:0006595,1.76e-11,118;UBERON:0001007,1.79e-10,116;UBERON:0001555,1.79e-10,116;UBERON:0007026,1.79e-10,116;UBERON:0004921,1.51e-09,114
|phase1_expression=1.12104192973356,130.167827049482,87.8148532021805,0,0.500895729946347,84.9469115874162,175.44309308724,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,2.48227378002213,0.261199789138935,104.635044506888,146.363121320854,123.459872284729,155.505080613426,254.902468267407,4.56056206695297,2.52030129759931,316.85289972643,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,2.64383317748712,3.24406179902447,4.03802854755699,1.56478268869608,0,0.659058548203415,1.1665793944457,0.979904951377538,0,0,0,0,5.14518872071894,2.57880095944881,4.64104883049698,0.809265843438391,0.528990979272033,0.633831403506179,0,2.66788438833342,1.3498495759221,0,1.4209602298922,1.49800055259202,0.384218305321555,0.829516898467821,0.675029691658453,0.630974884054146,0.856952953211411,2.65042249141936,0.61245399607477,0.383381884072945,0,1.10115880999389,0.383062014255563,0.614426133024974,0.527545150920775,0.731901148819277,0,0.279182999001381,1.68828783009504,1.22238598221448,1.47314292736834,1.70846016958924,0.372798891650601,0.832988126665025,0.302286240427142,5.79728977403356,67.1130624045481,0,1.61910957491345,1.29955283489534,3.58421509677868,4.91555470461132,26.9279909673331,12.2099422163348,12.0135455333516,0.985903938436763,26.9485602570067,15.2883143823987,14.2213340630666,54.3392512938147,65.8735650235256,54.5966400615966,2.39786147410026,2.07150306917737,25.0867215019554,5.55153045651635,9.43842982767638,5.30415643688935,6.0289056221049,11.6412820064348,9.29932775839599,57.8436224498435,7.66376591675532,12.3845477272982,10.5148452465816,6.8460870722722,13.5765070877862,11.1835056730873,2.63502717310392,1.67557365450764,7.15279754584056,0.599075622529601,0.599902730993408,0.254140454146129,1.3481157546434,0,1.63350657746724,2.9550134432687,2.81287003063364,1.45451631191692,0.811206315338788,23.6267324132734,7.46441823660558,1.51633655060205,1.68353484709179,1.04096354370163,0.459804208866946,0.720248519221397,1.65775299619287,0.612328492361951,1.0249097622788,1.49922759295566,1.55222022443409,0.862271971731369,0.567318240503458,1.75951124163949,1.97276159184817,1.39023624612799,2.089512999133,5.14455341019859,1.79130840136644,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0.710234206755631,0.196764231747404,1.69693824176116,0,1.87791380979733,0.350296027101508,2.30383789878873,2.95501435342371,0.56748166682099,0.584799949701329,2.63460138349261,0.536825675041487,0.841159794256509,2.26390147234426,1.65209391491899,4.49565963328025,4.05247676016945,4.87697010906921,10.6959992897337,9.88249270654378,12.8979265430025,17.3105319762429,10.9141684155238,27.8341233483578,21.1121575392226,24.8695590051439,21.4460495831032,19.7740269903929,12.3198688428576,6.77080329064848,1.13800740571849,2.39921876480431,0,5.29493452397817,6.98228953803453,3.85747009396752,1.45444035385792,1.18088118383682,0.627994911365499,0.740382983530803,10.9687472022245,1.00107063429656,0.982794975566015,2.9232074610031,1.42002084971952,2.41177159752417,4.07401362850272,8.91858026097513,2.7562988551756,13.453509246216,14.3768206527355,16.7463426450827,14.3537329632698,23.7424145270285,11.8402292924462,6.75420929908714,2.58654466233247,1.32643988239339,1.46668478797823,1.69745085775188,4.69380496577004,11.7254380209271,15.2347930167049,4.29294025287157,6.46304090835383,5.75808193086815,3.6674596791222,5.07976275618788,5.69860440157455,4.33947175744535,0,0,1.47529281905711,1.65562047782839,5.13761887960934,2.57865710502847,7.86887737808042,5.30188947129183,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0,1.16902343164525,1.97643888973262,1.92792789853084,5.39372323791421,10.6839362200353,14.6598263418218,15.6721616823909,3.98235415019888,1.45668381692989,0.604647113929502,1.69744571780308,5.31543407185391,8.60818414242997,15.247269296925,13.4507479906677,19.250858432775,12.3254335594968,7.37930260024991,11.3449097573006,0.340439605753788,1.26042765821917,1.94038025674132,2.35770738534752,3.72414490648775,4.63758925765383,3.9491764944509,1.522324745573,225.754183157289,414.343530609632,1.32317038832977,14.5099902588502,3.87514624070173,4.04096597018644,6.2073618881631,7.2221995887827,17.488850197791,1.48340241608408,0.170870880797853,2.68302928352189,3.1483069652851,0.565105371014073,0.27338845544205,0,3.0596117398894,1.95932033253121,2.9021994498929,9.54670618015114,1.58167996790568,1.62655573701479,3.99619761040665,3.97267762427491,10.0446779323242,19.8250589185686,20.91132429851,17.0141362289619,7.38805347763219,1.24267862617385,0,0.897099276263873,2.31641886639937,3.50012139019286,3.7456348808542,5.74450826668646,6.92407708009948,5.9894017028217,2.09718688851422,0.241584120826006,0,6.32022241256356,1.21635129174099,2.56777392912068,4.02754551231165,5.54982756569192,5.36439657909415,4.80781798079875,6.79371825003055,5.35122184725182,2.89585865288999,4.2346997757473,7.01696741326217,5.58028681513911,7.01261413089414,2.26730383615211,0,0.538283139656854,2.01461539636894,2.51146472241848,206.638405471751,6.77661009788881,11.7902608493486,2.50786052017682,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,1.37016503954128,0.755393897389701,1.35004500046361,3.60256962579376,3.17199686288943,2.5888015587591,0.31136204275253,1.99512436700516,2.39027048055788,3.40349403895612,1.88651846365184,0.735374033800057,5.33392146723877,4.32673620201678,4.81378814387723,4.04315538822076,5.57654459758527,5.65879024158229,3.65201879132541,4.09760975391163,3.21638626151434,4.76293691283074,3.82418275618023,3.27945674788299,3.29668720642645,4.85756436443511,4.11443102862498,3.54951612318675,4.05341522910446,4.50573891560218,4.04670335785922,4.48457421825885,4.75612729469209,3.94604567156764,5.02475221229689,6.73370725989286,4.50813068871862,4.23569274214923,2.04615521584845,4.33823155320705,4.43685205256625,3.2475375131933,7.48581147025307,11.1732948105115,8.99055160723564,11.6913452133343,14.3758058084661
|short_description=p1@Tnfrsf11b
}}

Latest revision as of 19:57, 26 September 2015

Short description:p1@Tnfrsf11b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tnfrsf11b_5end
Coexpression cluster:MCL_coexpression_mm9:31
Association with transcript: 171bp_to_ENSMUST00000079772, NM_008764, uc007vrk.1_5end
EntrezGene:Tnfrsf11b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tnfrsf11b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5130.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I687.81
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I784.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8175.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1104.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2146.36
GP2+ M cell, pool1.CNhs13228.11845-124H9123.46
GP2+ M cell, pool2.CNhs13231.11846-124I1155.51
GP2+ M cell, pool3.CNhs13240.11847-124I2254.90
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8316.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F767.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G154.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G265.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G354.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D725.09
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C111.64
adrenal gland, neonate N25.CNhs11223.1377-27I39.30
amnion, adult pregnant day17.5.CNhs10488.583-22A857.84
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.46
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E927.83
intestine, neonate N06.CNhs11102.688-20B821.11
intestine, neonate N07.CNhs11095.720-20F224.87
intestine, neonate N10.CNhs11098.755-23A521.45
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A323.74
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A611.73
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I414.66
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I7225.75
placenta, adult pregnant day17.CNhs10464.577-18G3414.34
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H34.04
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I117.49
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B819.83
stomach, neonate N07.CNhs11210.718-18A920.91
stomach, neonate N25.CNhs11104.1355-25E417.01
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B76.92
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A27.02
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F5206.64
uterus, adult.CNhs10509.92-27E56.78
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.76e-11118
endoderm1.76e-11118
presumptive endoderm1.76e-11118
digestive system1.79e-10116
digestive tract1.79e-10116
primitive gut1.79e-10116
subdivision of digestive tract1.51e-09114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:54109850..54109867,-&oldid=4271363"