Personal tools

FFCP PHASE1:Mm9::chr17:71824700..71824711,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74355
|EntrezGene=74355
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6P5D8
|UniProt=Q6P5D8
|association_with_transcript=-17bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|association_with_transcript=-17bp_to_ENSMUST00000024850,ENSMUST00000127430,NM_028887,uc008dmh.1_5end
|cluster_id=chr17:71824700..71824711,-
|description=CAGE_peak_3_at_Smchd1_5end
|description=CAGE_peak_3_at_Smchd1_5end
|id=chr17:71824700..71824711,-
|id=chr17:71824700..71824711,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.30e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.75e-08,29;UBERON:0005057,8.75e-08,29;UBERON:0000077,1.68e-07,35;UBERON:0000153,7.13e-07,43;UBERON:0001048,8.84e-07,134
|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0.30246421130683,0,1.00727563147134,0.934450562382103,3.61545305636414,0.703943610758334,1.40438715793196,0.856089841127525,0.957265907944037,3.76641605848653,2.62261207256992,4.33042690360362,4.45445588257617,2.79824751251259,5.99378114180652,6.85572168028694,3.39511721438424,1.36069264241712,5.26242041364692,4.4403964153619,1.11994695955385,0.91763712426868,0.57423196411502,1.29228598847722,0.215471232685889,0.570070258369122,0,0.221730510655305,1.27006134691926,1.84519436275371,15.8481681015439,1.1554064790051,1.32987716286794,1.42918549383658,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,1.94204141212461,1.51076181570693,1.31790010585369,1.46837401729345,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.419959264876088,0,6.54352163625172,5.07753499407941,5.37750078627942,0.514518872071894,0.286533439938757,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0.829516898467821,0.810035629990144,0.420649922702764,0.571301968807607,0.441737081903227,0.857435594504678,0.575072826109418,0,0,0.638436690425939,0.46081959976873,1.05509030184155,0.548925861614458,1.04182674111352,0,0.56276261003168,0.61119299110724,0.883885756421003,1.42371680799103,0.745597783301202,0.454357159999104,1.88928900266964,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0.896053774194671,0.702222100658759,2.21559419351475,0.779358013808606,2.47337702157238,1.40843419776681,2.56652954828636,2.54805239706646,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,0.45673551887624,9.58070169494535,1.33597925158342,1.73485326766136,2.13125834818499,1.38369298353635,2.26083960828934,1.52865319276416,1.25666591329675,0.988779870937496,1.01219549843938,3.5384422077995,3.23533699894818,2.42925670306433,1.45462575940567,3.72783522436244,1.75668478206928,1.8850203613211,1.53274233125155,3.95389910869537,1.19980546198682,2.66847476853436,0.449371918214468,1.83000241127451,1.13088916901578,0.695297280769106,1.27857728665165,0.41557608911912,0.973447578406546,2.95334155165917,2.36373244159177,3.53811861807145,0.631325567659422,2.21204753036596,2.06911893990126,2.34080768746954,1.80845781402858,2.38127747029647,3.58718416797579,3.65436725782942,2.32833033665114,2.58681591519411,4.53854592402766,3.34307135911503,3.28793598641362,2.78047249225598,5.2237824978325,3.08673204611915,3.38358253591438,2.80885274925294,3.08817488537658,0.852490498186778,3.52113813310353,3.98694301967864,1.44049649168812,2.3674473558521,2.75469924446365,2.00547246753592,1.39520366850245,2.95100741539581,1.86824547787471,3.29119699826961,1.14917224855367,1.54030738137126,1.31579988682799,0.439100230582101,0.805238512562231,1.47202963994889,1.85228302282712,0,1.05780226665418,1.91959425481711,3.25131340604614,4.25262622362908,3.22693639397348,2.2237804384487,1.52180500890047,0.949058123089023,1.4822905925161,0.754005626400808,1.79060824837036,1.55971269695296,2.69645822596266,0.864552199498777,0.597423819763102,1.32767530667157,3.99869794134051,2.25415471346161,4.48032921259691,1.93952487167626,2.87556861550306,1.7706230394792,1.32849133181642,0.941992367048249,0.740382983530803,0.592905254174298,4.33797274861845,5.70021085828289,3.37293168577281,4.26006254915856,2.894125917029,2.5462585178142,2.30156909960649,2.7562988551756,1.64736847912849,2.87536413054709,2.23284568601102,0.936113019343682,0.757736633841335,0.538192240565737,0,1.84753190166605,3.03186258832776,5.37784422258685,3.73439188705414,3.98973422090454,3.1826188913945,2.61848004974615,0.780534591431195,4.09851374676097,2.6575762757853,2.23236676120482,2.13022309130459,1.55416483679306,1.59113964439663,0,0.54390568381871,1.96705709207614,1.65562047782839,0.80275294993896,0.586058432961016,1.47541450839008,0.504941854408746,1.57754109708128,0.780877488593277,2.58508077279359,1.91175038362042,0.445597348164788,1.41538265394416,2.02405350837447,2.92255857911312,1.97643888973262,1.92792789853084,1.84522110770749,1.42452482933804,3.58351310577867,1.81467135269789,0,1.94224508923985,1.51161778482376,1.69744571780308,0.885905678642318,2.76691633149535,2.58428293168221,1.09060118843252,0.712994756769443,1.58018378967908,0,0,1.36175842301515,2.16073312837572,1.16422815404479,1.71469628025274,3.3694644392032,2.14042581122485,2.79733335023606,0.608929898229199,4.22409074514679,2.75381692122966,1.7642271844397,2.80306630000516,2.26050197374268,3.43783672090488,1.90995750405018,2.79039529566604,0.291480836629851,0.370850604021019,3.2465467351592,2.27025554759545,3.88908507476395,4.70921142511728,5.05768642567793,5.0331198105435,3.56954702987096,3.07893195112048,3.73139929271944,0,4.11236791655476,2.43983360552218,2.26811215725783,1.46361807210128,1.9652630737156,2.29269388854195,2.39695021603474,2.6175594198403,0.518459893167171,1.86401793926078,0.56369293868419,2.39226473670366,2.31641886639937,2.52786544847262,1.93739735216597,1.01373675294467,3.52071715937262,5.33837977860195,3.46035836604846,1.69108884578204,0.864090018773596,3.79213344753814,2.22997736819181,3.08132871494482,4.15746633528944,4.65469408735452,2.98022032171897,3.96644983415897,3.69223817936443,4.4425237977185,3.88654713940499,4.63800451629466,4.67797827550812,2.98256709085021,3.3894301632655,1.36038230169127,1.55390167361845,1.34570784914214,2.3503846290971,2.12508553435409,1.12609485270709,1.83151624267265,2.14368379079066,1.50471631210609,2.82375921308533,0.920650473014354,3.43737308063638,1.3748254587495,0.685082519770642,1.5107877947794,0,0.900642406448441,1.35942722695261,1.03552062350364,3.21740777510948,3.19219898720825,2.04880326904961,4.37592090722929,3.77303692730368,1.83843508450014,1.55572709461131,2.67845574410562,2.88827288632634,1.51618327058278,2.28131369901216,3.01802146217722,2.52832070168682,1.60062881012173,1.83793500657962,1.42888107384922,2.20180219295225,2.31491064556446,0.412085900803307,2.50238164228475,3.77156177623957,1.77475806159337,2.14592570952589,3.0522747492789,2.07040636913727,2.62305284464197,2.0122077016005,2.10455769150274,1.90125759384206,1.12228454331548,2.01679530811096,2.36410757701352,2.86461730218783,2.01417893541756,1.54325288784913,1.99848462350357,1.87145286756327,0.214871054048298,1.14772999241306,2.20591419119516,1.15933917810211
|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0.30246421130683,0,1.00727563147134,0.934450562382103,3.61545305636414,0.703943610758334,1.40438715793196,0.856089841127525,0.957265907944037,3.76641605848653,2.62261207256992,4.33042690360362,4.45445588257617,2.79824751251259,5.99378114180652,6.85572168028694,3.39511721438424,1.36069264241712,5.26242041364692,4.4403964153619,1.11994695955385,0.91763712426868,0.57423196411502,1.29228598847722,0.215471232685889,0.570070258369122,0,0.221730510655305,1.27006134691926,1.84519436275371,15.8481681015439,1.1554064790051,1.32987716286794,1.42918549383658,0.418531630736908,2.3440060335714,0.523523743973798,0,0.683045484958446,1.94204141212461,1.51076181570693,1.31790010585369,1.46837401729345,0.782391344348039,0.218025156380447,0.659058548203415,0.58328969722285,0.419959264876088,0,6.54352163625172,5.07753499407941,5.37750078627942,0.514518872071894,0.286533439938757,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0.829516898467821,0.810035629990144,0.420649922702764,0.571301968807607,0.441737081903227,0.857435594504678,0.575072826109418,0,0,0.638436690425939,0.46081959976873,1.05509030184155,0.548925861614458,1.04182674111352,0,0.56276261003168,0.61119299110724,0.883885756421003,1.42371680799103,0.745597783301202,0.454357159999104,1.88928900266964,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0.896053774194671,0.702222100658759,2.21559419351475,0.779358013808606,2.47337702157238,1.40843419776681,2.56652954828636,2.54805239706646,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,0.45673551887624,9.58070169494535,1.33597925158342,1.73485326766136,2.13125834818499,1.38369298353635,2.26083960828934,1.52865319276416,1.25666591329675,0.988779870937496,1.01219549843938,3.5384422077995,3.23533699894818,2.42925670306433,1.45462575940567,3.72783522436244,1.75668478206928,1.8850203613211,1.53274233125155,3.95389910869537,1.19980546198682,2.66847476853436,0.449371918214468,1.83000241127451,1.13088916901578,0.695297280769106,1.27857728665165,0.41557608911912,0.973447578406546,2.95334155165917,2.36373244159177,3.53811861807145,0.631325567659422,2.21204753036596,2.06911893990126,2.34080768746954,1.80845781402858,2.38127747029647,3.58718416797579,3.65436725782942,2.32833033665114,2.58681591519411,4.53854592402766,3.34307135911503,3.28793598641362,2.78047249225598,5.2237824978325,3.08673204611915,3.38358253591438,2.80885274925294,3.08817488537658,0.852490498186778,3.52113813310353,3.98694301967864,1.44049649168812,2.3674473558521,2.75469924446365,2.00547246753592,1.39520366850245,2.95100741539581,1.86824547787471,3.29119699826961,1.14917224855367,1.54030738137126,1.31579988682799,0.439100230582101,0.805238512562231,1.47202963994889,1.85228302282712,0,1.05780226665418,1.91959425481711,3.25131340604614,4.25262622362908,3.22693639397348,2.2237804384487,1.52180500890047,0.949058123089023,1.4822905925161,0.754005626400808,1.79060824837036,1.55971269695296,2.69645822596266,0.864552199498777,0.597423819763102,1.32767530667157,3.99869794134051,2.25415471346161,4.48032921259691,1.93952487167626,2.87556861550306,1.7706230394792,1.32849133181642,0.941992367048249,0.740382983530803,0.592905254174298,4.33797274861845,5.70021085828289,3.37293168577281,4.26006254915856,2.894125917029,2.5462585178142,2.30156909960649,2.7562988551756,1.64736847912849,2.87536413054709,2.23284568601102,0.936113019343682,0.757736633841335,0.538192240565737,0,1.84753190166605,3.03186258832776,5.37784422258685,3.73439188705414,3.98973422090454,3.1826188913945,2.61848004974615,0.780534591431195,4.09851374676097,2.6575762757853,2.23236676120482,2.13022309130459,1.55416483679306,1.59113964439663,0,0.54390568381871,1.96705709207614,1.65562047782839,0.80275294993896,0.586058432961016,1.47541450839008,0.504941854408746,1.57754109708128,0.780877488593277,2.58508077279359,1.91175038362042,0.445597348164788,1.41538265394416,2.02405350837447,2.92255857911312,1.97643888973262,1.92792789853084,1.84522110770749,1.42452482933804,3.58351310577867,1.81467135269789,0,1.94224508923985,1.51161778482376,1.69744571780308,0.885905678642318,2.76691633149535,2.58428293168221,1.09060118843252,0.712994756769443,1.58018378967908,0,0,1.36175842301515,2.16073312837572,1.16422815404479,1.71469628025274,3.3694644392032,2.14042581122485,2.79733335023606,0.608929898229199,4.22409074514679,2.75381692122966,1.7642271844397,2.80306630000516,2.26050197374268,3.43783672090488,1.90995750405018,2.79039529566604,0.291480836629851,0.370850604021019,3.2465467351592,2.27025554759545,3.88908507476395,4.70921142511728,5.05768642567793,5.0331198105435,3.56954702987096,3.07893195112048,3.73139929271944,0,4.11236791655476,2.43983360552218,2.26811215725783,1.46361807210128,1.9652630737156,2.29269388854195,2.39695021603474,2.6175594198403,0.518459893167171,1.86401793926078,0.56369293868419,2.39226473670366,2.31641886639937,2.52786544847262,1.93739735216597,1.01373675294467,3.52071715937262,5.33837977860195,3.46035836604846,1.69108884578204,0.864090018773596,3.79213344753814,2.22997736819181,3.08132871494482,4.15746633528944,4.65469408735452,2.98022032171897,3.96644983415897,3.69223817936443,4.4425237977185,3.88654713940499,4.63800451629466,4.67797827550812,2.98256709085021,3.3894301632655,1.36038230169127,1.55390167361845,1.34570784914214,2.3503846290971,2.12508553435409,1.12609485270709,1.83151624267265,2.14368379079066,1.50471631210609,2.82375921308533,0.920650473014354,3.43737308063638,1.3748254587495,0.685082519770642,1.5107877947794,0,0.900642406448441,1.35942722695261,1.03552062350364,3.21740777510948,3.19219898720825,2.04880326904961,4.37592090722929,3.77303692730368,1.83843508450014,1.55572709461131,2.67845574410562,2.88827288632634,1.51618327058278,2.28131369901216,3.01802146217722,2.52832070168682,1.60062881012173,1.83793500657962,1.42888107384922,2.20180219295225,2.31491064556446,0.412085900803307,2.50238164228475,3.77156177623957,1.77475806159337,2.14592570952589,3.0522747492789,2.07040636913727,2.62305284464197,2.0122077016005,2.10455769150274,1.90125759384206,1.12228454331548,2.01679530811096,2.36410757701352,2.86461730218783,2.01417893541756,1.54325288784913,1.99848462350357,1.87145286756327,0.214871054048298,1.14772999241306,2.20591419119516,1.15933917810211
|short_description=p3@Smchd1
|short_description=p3@Smchd1
}}
}}

Latest revision as of 20:40, 26 September 2015

Short description:p3@Smchd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smchd1_5end
Coexpression cluster:NA
Association with transcript: -17bp_to_ENSMUST00000024850, ENSMUST00000127430, NM_028887, uc008dmh.1_5end
EntrezGene:Smchd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smchd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H24.54
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.88
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H33.44
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A24.68
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ8.75e-0829
immune organ8.75e-0829
mixed endoderm/mesoderm-derived structure1.68e-0735
anterior region of body7.13e-0743
primordium8.84e-07134
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:71824700..71824711,-&oldid=4273136"