FFCP PHASE1:Mm9::chr7:52703236..52703248,+: Difference between revisions
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|id=chr7:52703236..52703248,+
|short_description=p4@Gys1
|description=CAGE_peak_4_at_Gys1_5end
|association_with_transcript=135bp_to_ENSMUST00000130561_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14936 | |EntrezGene=14936 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=135bp_to_ENSMUST00000130561_5end | |||
|cluster_id=chr7:52703236..52703248,+ | |||
|description=CAGE_peak_4_at_Gys1_5end | |||
|id=chr7:52703236..52703248,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,4.99e-07,6;CL:0002489,4.99e-07,6;CL:0000898,4.99e-07,6;CL:0000809,4.99e-07,6;CL:0000810,4.99e-07,6;CL:0000895,4.99e-07,6;CL:0000808,4.99e-07,6;CL:0000894,4.99e-07,6;CL:0000806,4.99e-07,6;CL:0000807,4.99e-07,6;CL:0000805,4.99e-07,6;CL:0002425,4.99e-07,6;CL:0002436,4.99e-07,6;CL:0002427,4.99e-07,6;CL:0002428,4.99e-07,6;CL:0002429,4.99e-07,6;CL:0002433,4.99e-07,6;CL:0002431,4.99e-07,6;CL:0002432,4.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.34e-14,10;UBERON:0000411,2.34e-14,10;UBERON:0001950,2.34e-14,10;UBERON:0001153,4.59e-10,1;UBERON:0001045,4.59e-10,1;UBERON:0002619,1.38e-08,17;UBERON:0000956,5.30e-07,21;UBERON:0001869,5.30e-07,21;UBERON:0000203,5.30e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.563154888606667,0,9.93064215707929,4.22792442675283,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,3.72493471920384,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.605809546665472,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.869121600961382,0.511430914660661,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,1.00107063429656,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0.665957860122194,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,3.15224842256954,2.26571204492102,0.51776031175182,0.31136204275253,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.563154888606667,0,9.93064215707929,4.22792442675283,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,3.72493471920384,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.605809546665472,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.869121600961382,0.511430914660661,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,1.00107063429656,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.645799117388655,0,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0.665957860122194,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,1.20297227640581,0.685082519770642,0,1.35004500046361,3.15224842256954,2.26571204492102,0.51776031175182,0.31136204275253,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0.765153328275374,0.220591419119515,0 | ||
|short_description=p4@Gys1 | |||
}} | }} |
Latest revision as of 21:13, 26 September 2015
Short description: | p4@Gys1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gys1_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 135bp_to_ENSMUST00000130561_5end |
EntrezGene: | Gys1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 4.99e-07 | 6 |
double negative thymocyte | 4.99e-07 | 6 |
naive T cell | 4.99e-07 | 6 |
double-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.99e-07 | 6 |
DN4 thymocyte | 4.99e-07 | 6 |
DN1 thymic pro-T cell | 4.99e-07 | 6 |
DN2 thymocyte | 4.99e-07 | 6 |
DN3 thymocyte | 4.99e-07 | 6 |
immature single positive thymocyte | 4.99e-07 | 6 |
early T lineage precursor | 4.99e-07 | 6 |
mature CD4 single-positive thymocyte | 4.99e-07 | 6 |
resting double-positive thymocyte | 4.99e-07 | 6 |
double-positive blast | 4.99e-07 | 6 |
CD69-positive double-positive thymocyte | 4.99e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 4.99e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.99e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 4.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.34e-14 | 10 |
visual cortex | 2.34e-14 | 10 |
neocortex | 2.34e-14 | 10 |
caecum | 4.59e-10 | 1 |
midgut | 4.59e-10 | 1 |
regional part of cerebral cortex | 1.38e-08 | 17 |
cerebral cortex | 5.30e-07 | 21 |
cerebral hemisphere | 5.30e-07 | 21 |
pallium | 5.30e-07 | 21 |