Personal tools

FFCP PHASE1:Mm9::chr1:188529859..188529878,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21808
|EntrezGene=21808
|HGNC=
|HGNC=
|MCL_coexpression_id=106
|MCL_coexpression_id=106
|TSSclassifier=NA
|UniProt=P27090,Q3TWH5,Q8CDZ9
|UniProt=P27090,Q3TWH5,Q8CDZ9
|association_with_transcript=0bp_to_ENSMUST00000045288,NM_009367,uc007dzo.2,uc007dzp.2_5end
|association_with_transcript=0bp_to_ENSMUST00000045288,NM_009367,uc007dzo.2,uc007dzp.2_5end
|cluster_id=chr1:188529859..188529878,-
|description=CAGE_peak_1_at_Tgfb2_5end
|description=CAGE_peak_1_at_Tgfb2_5end
|id=chr1:188529859..188529878,-
|id=chr1:188529859..188529878,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,9.59e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!1.09e-10!333;UBERON:0000922!4.83e-08!328;UBERON:0000479!2.03e-07!349;UBERON:0002048!4.62e-07!14;UBERON:0000117!4.62e-07!14;UBERON:0000171!4.62e-07!14;UBERON:0000170!4.62e-07!14;UBERON:0005597!4.62e-07!14;UBERON:0000118!4.62e-07!14;UBERON:0005153!5.62e-07!17;UBERON:0005085!9.12e-07!13
|ontology_enrichment_uberon=UBERON:0000468!1.09e-10!333;UBERON:0000922!4.83e-08!328;UBERON:0000479!2.03e-07!349;UBERON:0002048!4.62e-07!14;UBERON:0000117!4.62e-07!14;UBERON:0000171!4.62e-07!14;UBERON:0000170!4.62e-07!14;UBERON:0005597!4.62e-07!14;UBERON:0000118!4.62e-07!14;UBERON:0005153!5.62e-07!17;UBERON:0005085!9.12e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.49e-09,20;UBERON:0000479,1.08e-07,349;UBERON:0000033,2.04e-07,13;UBERON:0002048,4.35e-07,14;UBERON:0000117,4.35e-07,14;UBERON:0000171,4.35e-07,14;UBERON:0000170,4.35e-07,14;UBERON:0005597,4.35e-07,14;UBERON:0000118,4.35e-07,14;UBERON:0005153,5.30e-07,17;UBERON:0003102,8.37e-07,22;UBERON:0005085,8.62e-07,13;UBERON:0002410,9.59e-07,9;UBERON:0000020,9.67e-07,12;UBERON:0001032,9.67e-07,12;UBERON:0004456,9.67e-07,12
|phase1_expression=147.817385877725,0,0,0,1.00179145989269,0,0,0,0,0,0.171217968225505,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0.84877930359606,5.44277056966847,0.0992909512008853,0,0,0.68822784320151,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,4.8660926985367,8.9937908559224,1.56478268869608,63.2272953503295,39.9828852576739,55.8013810343193,13.4386964760348,18.6878333674463,0,0,0,5.91696702882678,14.3266719969378,22.17389996793,4.24864567805155,3.70293685490423,3.1691570175309,4.40497891689872,2.66788438833342,2.6996991518442,3.9554654502679,4.2628806896766,7.49000276296012,8.83702102239575,1.45165457231869,1.4850653216486,1.26194976810829,5.14171771926846,5.30084498283872,1.10241719293459,1.91690942036473,0.919218786610021,3.30347642998166,4.08599481872601,3.68655679814984,5.27545150920775,7.41049913179518,4.68822033501084,2.51264699101243,1.12552522006336,5.34793867218835,5.89257170947335,5.97961059356232,6.71038004971082,2.04460721999597,1.36028808192214,93.3363653619403,0.860423876981386,8.15965600449301,0,0.649776417447669,0,10.1119982494861,10.9075406449957,5.97507810586598,8.48014978824817,304.22178671763,24.3820307087204,28.028576367731,21.3320010945999,2.38140145112336,1.52015919285059,2.52762222507392,4.79572294820052,3.36619248741323,4.00793775475027,24.1144604204929,10.3518262626128,4.84292544237723,5.12456977878917,11.170927177892,1.63366568728578,35.3488803860155,34.2700475900191,7.96149496754887,26.8532970912699,12.8088080707028,21.3345111379498,5.59175283654366,4.09893115816166,3.77004072264219,2.81002760729451,0.11981512450592,0,0,5.39246301857362,6.8625090422794,7.03664371832041,3.82413504423008,3.83573185995496,7.2725815595846,6.32740925964255,31.1628453381968,14.4312085907708,6.06534620240819,26.9365575534687,103.055390826461,48.0495398265958,54.7388874608262,34.9635177378859,48.2378778982915,51.5017155545096,47.4130726272228,76.0587909972706,24.574751194344,114.220072421363,101.875700890926,56.3333032338867,65.0630563187899,49.4518076461476,51.8570983748018,22.2918378836712,0,0,0.284163499395593,52.402820451482,63.322036194896,50.5974392705452,56.5819918048652,32.8596267018164,22.5229984815572,21.1605889722871,19.047411499373,18.4489240940128,19.4180622897907,19.043425833175,11.9981838127866,8.77199924551994,8.34290438105992,6.30770168173747,24.6039239820029,31.9004298375782,0.330418782983798,8.72686869989696,33.9128318351022,32.0486607167405,26.5466970323512,10.2858597557905,8.45036566610507,6.27744566171445,5.21981967698963,12.0230236948528,11.0587491872119,8.55512829776949,12.2827374885046,4.49409704327111,4.97117514711797,4.97853183135918,14.035424670528,10.3966146474853,10.1436962105772,9.36796108088446,8.14600446104028,8.97738494596078,11.3825766823663,7.0852871030209,5.49495547444812,4.68909222902842,0.296452627087149,14.8492144087324,10.614185736113,2.69834534861824,2.02860121388503,1.4470629585145,3.05551022137704,2.5892652370573,0.810676133875177,2.47105271869273,7.18841032636773,10.0478055870496,4.36852742360385,3.28352541331245,3.22915344339442,0.964887042726734,18.2905658264939,69.9223309433089,63.7193057888321,56.864603734688,68.0601720036656,73.8702595318407,29.7554551107517,28.4895125872386,106.876627703997,116.490426755256,90.5703085974527,28.6760800752541,24.866637388689,18.0811323226889,0,0,20.6540994667995,15.7283945393698,6.26147300952389,3.6335622843583,0.163934945376675,12.1186045058099,81.7166288288105,95.6574923526764,117.836598559841,80.0545473141049,56.3680645428457,51.2368520727787,104.441161032123,73.9407320515619,89.3350378159143,3.85585579706168,12.0649072427028,37.0376455627891,26.3876874152793,14.5173708215831,9.2921596837974,6.5550771761845,3.93020624054176,4.14931175462976,10.6308681437078,18.1386737286917,23.0001180919717,15.6319503675327,17.4683715408513,11.0612865277536,8.4334886859999,8.25084345985495,3.74483566329167,50.4171063287669,24.9662259700716,17.1469628025274,14.1872186913819,10.3453914209201,13.8221177305782,9.74287837166718,150.659236576902,89.1813018336683,16.0985730580122,36.1100893941841,27.1260236849121,24.6076733706876,15.6377770644109,17.0706535734864,7.28702091574627,9.27126510052548,0.512612642393558,4.95328483111734,4.62986318424279,3.01389531207506,3.41735569302563,1.60144721244566,0.509935289981566,0.139951452323658,0.276399947608848,5.72802370809068,48.8739110082854,17.6887936400358,12.9606408986162,12.5452977608681,11.7915784422936,10.519419018016,13.0592460046031,10.2084817373772,9.46189305030088,352.299390520287,0,26.9129782879162,25.480607530393,24.8897521080381,27.381882577279,20.7816034353657,29.2219524227927,12.2392121753313,7.44501345422547,3.8653459332161,2.59227005632079,2.52808896502543,18.2452693761148,8.62772040184549,2.85825810551149,3.75956060901711,2.78153896693771,1.68273629327956,1.9199638532695,1.71642964911851,1.295515713135,0.806609481094724,1.65678397257579,1.05833025804362,1.5193997283604,15.1909357022192,0.221985953374065,0.269141569828427,0.671538465456314,45.0131754095004,4985.2219129343,20.5129819179337,43.9455177112085,7.52358156053045,5.0827665835536,5.06357760157895,6.87474616127276,2.23409137046794,5.48066015816514,2.2661816921691,2.02506750069542,0.900642406448441,0.906284817968409,3.62432218226274,22.937003816103,45.8878604411186,50.3664136974696,28.929699331127,21.5901557506822,15.9943852351512,24.2248933303761,26.5785223838174,27.2781328153043,19.4576853058124,26.8688057883654,22.8237873077152,20.2265656134946,23.4332057801822,21.7106072652218,26.1961530205691,20.859178670074,18.1334667235883,23.0768104449852,24.5822196624444,22.6293706574374,21.4745725452798,23.3667466148375,20.0578054952613,23.1509075821713,20.3075058940024,21.2196448532416,19.2040889349625,21.3212458738003,26.9348290395714,21.2356682442272,20.2919233693661,16.7784727699573,18.43748410113,28.1643652032466,28.4784058849258,19.8841867178597,25.9993975398441,30.7974214630838,23.6032818457882,20.6362373702175
|phase1_expression=147.817385877725,0,0,0,1.00179145989269,0,0,0,0,0,0.171217968225505,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0.84877930359606,5.44277056966847,0.0992909512008853,0,0,0.68822784320151,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,4.8660926985367,8.9937908559224,1.56478268869608,63.2272953503295,39.9828852576739,55.8013810343193,13.4386964760348,18.6878333674463,0,0,0,5.91696702882678,14.3266719969378,22.17389996793,4.24864567805155,3.70293685490423,3.1691570175309,4.40497891689872,2.66788438833342,2.6996991518442,3.9554654502679,4.2628806896766,7.49000276296012,8.83702102239575,1.45165457231869,1.4850653216486,1.26194976810829,5.14171771926846,5.30084498283872,1.10241719293459,1.91690942036473,0.919218786610021,3.30347642998166,4.08599481872601,3.68655679814984,5.27545150920775,7.41049913179518,4.68822033501084,2.51264699101243,1.12552522006336,5.34793867218835,5.89257170947335,5.97961059356232,6.71038004971082,2.04460721999597,1.36028808192214,93.3363653619403,0.860423876981386,8.15965600449301,0,0.649776417447669,0,10.1119982494861,10.9075406449957,5.97507810586598,8.48014978824817,304.22178671763,24.3820307087204,28.028576367731,21.3320010945999,2.38140145112336,1.52015919285059,2.52762222507392,4.79572294820052,3.36619248741323,4.00793775475027,24.1144604204929,10.3518262626128,4.84292544237723,5.12456977878917,11.170927177892,1.63366568728578,35.3488803860155,34.2700475900191,7.96149496754887,26.8532970912699,12.8088080707028,21.3345111379498,5.59175283654366,4.09893115816166,3.77004072264219,2.81002760729451,0.11981512450592,0,0,5.39246301857362,6.8625090422794,7.03664371832041,3.82413504423008,3.83573185995496,7.2725815595846,6.32740925964255,31.1628453381968,14.4312085907708,6.06534620240819,26.9365575534687,103.055390826461,48.0495398265958,54.7388874608262,34.9635177378859,48.2378778982915,51.5017155545096,47.4130726272228,76.0587909972706,24.574751194344,114.220072421363,101.875700890926,56.3333032338867,65.0630563187899,49.4518076461476,51.8570983748018,22.2918378836712,0,0,0.284163499395593,52.402820451482,63.322036194896,50.5974392705452,56.5819918048652,32.8596267018164,22.5229984815572,21.1605889722871,19.047411499373,18.4489240940128,19.4180622897907,19.043425833175,11.9981838127866,8.77199924551994,8.34290438105992,6.30770168173747,24.6039239820029,31.9004298375782,0.330418782983798,8.72686869989696,33.9128318351022,32.0486607167405,26.5466970323512,10.2858597557905,8.45036566610507,6.27744566171445,5.21981967698963,12.0230236948528,11.0587491872119,8.55512829776949,12.2827374885046,4.49409704327111,4.97117514711797,4.97853183135918,14.035424670528,10.3966146474853,10.1436962105772,9.36796108088446,8.14600446104028,8.97738494596078,11.3825766823663,7.0852871030209,5.49495547444812,4.68909222902842,0.296452627087149,14.8492144087324,10.614185736113,2.69834534861824,2.02860121388503,1.4470629585145,3.05551022137704,2.5892652370573,0.810676133875177,2.47105271869273,7.18841032636773,10.0478055870496,4.36852742360385,3.28352541331245,3.22915344339442,0.964887042726734,18.2905658264939,69.9223309433089,63.7193057888321,56.864603734688,68.0601720036656,73.8702595318407,29.7554551107517,28.4895125872386,106.876627703997,116.490426755256,90.5703085974527,28.6760800752541,24.866637388689,18.0811323226889,0,0,20.6540994667995,15.7283945393698,6.26147300952389,3.6335622843583,0.163934945376675,12.1186045058099,81.7166288288105,95.6574923526764,117.836598559841,80.0545473141049,56.3680645428457,51.2368520727787,104.441161032123,73.9407320515619,89.3350378159143,3.85585579706168,12.0649072427028,37.0376455627891,26.3876874152793,14.5173708215831,9.2921596837974,6.5550771761845,3.93020624054176,4.14931175462976,10.6308681437078,18.1386737286917,23.0001180919717,15.6319503675327,17.4683715408513,11.0612865277536,8.4334886859999,8.25084345985495,3.74483566329167,50.4171063287669,24.9662259700716,17.1469628025274,14.1872186913819,10.3453914209201,13.8221177305782,9.74287837166718,150.659236576902,89.1813018336683,16.0985730580122,36.1100893941841,27.1260236849121,24.6076733706876,15.6377770644109,17.0706535734864,7.28702091574627,9.27126510052548,0.512612642393558,4.95328483111734,4.62986318424279,3.01389531207506,3.41735569302563,1.60144721244566,0.509935289981566,0.139951452323658,0.276399947608848,5.72802370809068,48.8739110082854,17.6887936400358,12.9606408986162,12.5452977608681,11.7915784422936,10.519419018016,13.0592460046031,10.2084817373772,9.46189305030088,352.299390520287,0,26.9129782879162,25.480607530393,24.8897521080381,27.381882577279,20.7816034353657,29.2219524227927,12.2392121753313,7.44501345422547,3.8653459332161,2.59227005632079,2.52808896502543,18.2452693761148,8.62772040184549,2.85825810551149,3.75956060901711,2.78153896693771,1.68273629327956,1.9199638532695,1.71642964911851,1.295515713135,0.806609481094724,1.65678397257579,1.05833025804362,1.5193997283604,15.1909357022192,0.221985953374065,0.269141569828427,0.671538465456314,45.0131754095004,4985.2219129343,20.5129819179337,43.9455177112085,7.52358156053045,5.0827665835536,5.06357760157895,6.87474616127276,2.23409137046794,5.48066015816514,2.2661816921691,2.02506750069542,0.900642406448441,0.906284817968409,3.62432218226274,22.937003816103,45.8878604411186,50.3664136974696,28.929699331127,21.5901557506822,15.9943852351512,24.2248933303761,26.5785223838174,27.2781328153043,19.4576853058124,26.8688057883654,22.8237873077152,20.2265656134946,23.4332057801822,21.7106072652218,26.1961530205691,20.859178670074,18.1334667235883,23.0768104449852,24.5822196624444,22.6293706574374,21.4745725452798,23.3667466148375,20.0578054952613,23.1509075821713,20.3075058940024,21.2196448532416,19.2040889349625,21.3212458738003,26.9348290395714,21.2356682442272,20.2919233693661,16.7784727699573,18.43748410113,28.1643652032466,28.4784058849258,19.8841867178597,25.9993975398441,30.7974214630838,23.6032818457882,20.6362373702175
|short_description=p1@Tgfb2
|short_description=p1@Tgfb2
}}
}}

Latest revision as of 23:22, 26 September 2015

Short description:p1@Tgfb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tgfb2_5end
Coexpression cluster:MCL_coexpression_mm9:106
Association with transcript: 0bp_to_ENSMUST00000045288, NM_009367, uc007dzo.2, uc007dzp.2_5end
EntrezGene:Tgfb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tgfb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7147.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C263.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B839.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C355.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.34
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6304.22
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C524.11
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C111.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A835.35
aorta, adult.CNhs10498.46-23H134.27
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F526.85
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.43
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G426.94
eyeball, embryo E12.CNhs11016.345-16C6103.06
eyeball, embryo E14.CNhs10521.399-16E248.05
eyeball, embryo E15.CNhs10593.426-16C954.74
eyeball, embryo E17.CNhs11023.1261-18D434.96
eyeball, neonate N00.CNhs11207.633-15C648.24
eyeball, neonate N01.CNhs11140.1532-43E751.50
eyeball, neonate N02.CNhs11205.1551-44G847.41
eyeball, neonate N16.CNhs11188.777-19A276.06
forelimb, embryo E11.CNhs10596.335-25E224.57
forelimb, embryo E12.CNhs10600.359-14H2114.22
forelimb, embryo E13.CNhs10589.384-1E2101.88
forelimb, embryo E14.CNhs10577.413-26A856.33
forelimb, embryo E15.CNhs11007.437-20E765.06
forelimb, embryo E17.CNhs10598.1517-43C449.45
forelimb, embryo E18.CNhs11008.1520-43B551.86
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E952.40
heart, embryo E12.CNhs11015.353-12F563.32
heart, embryo E13.CNhs11013.376-3I950.60
heart, embryo E14.CNhs10597.403-26D456.58
heart, embryo E15.CNhs11017.431-16C832.86
heart, embryo E16.CNhs11021.457-17C622.52
heart, embryo E17.CNhs11025.479-18E521.16
heart, embryo E18.CNhs11030.1283-20G319.05
heart, neonate N00.CNhs11213.639-21E318.45
heart, neonate N03.CNhs11221.1349-25I219.42
heart, neonate N10.CNhs11118.749-24G119.04
heart, neonate N16.CNhs11209.782-15G112.00
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E824.60
hippocampus, neonate N00.CNhs11228.627-43G131.90
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I533.91
intestine, embryo E13.CNhs11010.381-16D532.05
intestine, embryo E15.CNhs10602.976-16D826.55
intestine, embryo E16.CNhs10585.463-22H410.29
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E912.02
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F810.40
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G78.98
kidney, neonate N10.CNhs11206.758-6D511.38
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F814.85
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B118.29
lung, embryo E12.CNhs10522.354-16G269.92
lung, embryo E14.CNhs10604.404-26F863.72
lung, embryo E15.CNhs11020.432-17C556.86
lung, embryo E16.CNhs10998.458-17B668.06
lung, embryo E17.CNhs10605.480-44A673.87
lung, embryo E18.CNhs10583.1287-20I629.76
lung, neonate N00.CNhs11224.640-42C628.49
lung, neonate N06.CNhs11212.683-20E5106.88
lung, neonate N07.CNhs11111.715-19A3116.49
lung, neonate N10.CNhs11219.750-23E690.57
lung, neonate N20.CNhs11109.822-18A428.68
lung, neonate N25.CNhs11119.1359-25C724.87
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E181.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E295.66
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3117.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D780.05
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D856.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D951.24
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4104.44
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D573.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D689.34
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I712.06
ovary, embryo E18.CNhs11040.505-44H737.04
ovary, neonate N00.CNhs11217.1299-22I426.39
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F46.56
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G923.00
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D817.47
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E650.42
pituitary gland, embryo E13.CNhs11009.370-44C724.97
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B914.19
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I7150.66
placenta, adult pregnant day17.CNhs10464.577-18G389.18
prostate, adult.CNhs10470.859-1F816.10
skin, adult.CNhs10492.30-1C336.11
skin, neonate N00.CNhs11124.650-25G427.13
skin, neonate N03.CNhs11215.662-22H324.61
skin, neonate N06.CNhs11097.693-20I515.64
skin, neonate N10.CNhs11108.762-6C417.07
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E348.87
stomach, embryo E15.CNhs10603.1252-16G817.69
stomach, embryo E16.CNhs11022.459-17D412.96
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A913.06
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I19.46
submandibular gland, adult.CNhs10469.59-29C1352.30
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F526.91
testis, embryo E15.CNhs11034.443-27C525.48
testis, embryo E16.CNhs11033.470-26G524.89
testis, embryo E17.CNhs11029.486-18I527.38
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B729.22
testis, neonate N07.CNhs11222.726-26I412.24
testis, neonate N10.CNhs11204.763-44D97.45
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I418.25
thymus, embryo E15.CNhs11005.430-45I28.63
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E445.01
uterus, adult pregnant day19.CNhs10497.590-15F54985.22
uterus, adult.CNhs10509.92-27E520.51
vagina, adult.CNhs10502.89-27D543.95
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I822.94
whole body, embryo E12.CNhs10587.857-27C945.89
whole body, embryo E13.CNhs10512.372-23H250.37
whole body, embryo E14.5.CNhs10578.420-27D228.93
whole body, embryo E14.CNhs10519.395-14B121.59
whole body, embryo E16.CNhs10514.453-14F215.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.58
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.44
whole body, embryo E17.5.CNhs10513.490-9F928.16
whole body, embryo E17.CNhs10517.475-3I528.48
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C226.00
whole body, neonate N01.CNhs10576.659-23C630.80
whole body, neonate N06.CNhs10515.692-21D123.60
whole body, neonate N10.CNhs10518.761-6B420.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron9.59e-079

Uber anatomy
Ontology termp-valuen
epithelial fold8.49e-0920
tissue1.08e-07349
head2.04e-0713
lung4.35e-0714
respiratory tube4.35e-0714
respiration organ4.35e-0714
pair of lungs4.35e-0714
lung primordium4.35e-0714
lung bud4.35e-0714
epithelial bud5.30e-0717
surface structure8.37e-0722
ectodermal placode8.62e-0713
autonomic nervous system9.59e-079
sense organ9.67e-0712
sensory system9.67e-0712
entire sense organ system9.67e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:188529859..188529878,-&oldid=4279951"