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FFCP PHASE1:Mm9::chr4:41688174..41688219,-: Difference between revisions

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{{FFCP|EntrezGene=18391|HGNC=|UniProt=A2AMS1,O55242,A2AMS0,B7ZJH9|association_with_transcript=0bp_to_ENSMUST00000146655,NM_011014,uc008sjk.1,uc008sjl.1,uc012dcg.1_5end|description=CAGE_peak_1_at_Sigmar1_5end|id=chr4:41688174..41688219,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!5.61e-11!47;UBERON:0002100!1.34e-10!98;UBERON:0009854!3.53e-10!23;UBERON:0009856!3.53e-10!23;UBERON:0002365!5.12e-10!25;UBERON:0002330!5.12e-10!25;UBERON:0002107!8.54e-10!22;UBERON:0007499!8.54e-10!22;UBERON:0006925!8.54e-10!22;UBERON:0009497!8.54e-10!22;UBERON:0000015!8.54e-10!22;UBERON:0002423!8.54e-10!22;UBERON:0006235!8.54e-10!22;UBERON:0008835!8.54e-10!22;UBERON:0003894!8.54e-10!22;UBERON:0004161!8.54e-10!22;UBERON:0008836!8.54e-10!22;UBERON:0005177!1.28e-09!85|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.68e-11,45;UBERON:0009854,3.53e-10,23;UBERON:0009856,3.53e-10,23;UBERON:0002365,5.12e-10,25;UBERON:0002330,5.12e-10,25;UBERON:0002107,8.54e-10,22;UBERON:0007499,8.54e-10,22;UBERON:0006925,8.54e-10,22;UBERON:0009497,8.54e-10,22;UBERON:0000015,8.54e-10,22;UBERON:0002423,8.54e-10,22;UBERON:0006235,8.54e-10,22;UBERON:0008835,8.54e-10,22;UBERON:0003894,8.54e-10,22;UBERON:0004161,8.54e-10,22;UBERON:0008836,8.54e-10,22;UBERON:0002100,1.97e-09,90;UBERON:0005177,2.83e-08,79;UBERON:0003104,1.21e-07,61;UBERON:0009142,1.21e-07,61|phase1_expression=25.1433689954527,4.88565570695105,3.18499467572675,4.23449895829562,2.00358291978539,14.7733759282463,14.2503710763271,15.4947988129892,14.0788722151667,15.6823232635736,42.1196201834742,42.678105062505,14.8944635040149,18.6205457152464,11.9919514253639,13.1608923803387,2.79824751251259,9.93705820878449,11.9289557236993,7.63901373236454,18.1142208021779,19.5603173865744,15.4107875591972,18.7191134668286,21.1056538581796,5.7423196411502,9.47676391549965,14.0056301245828,27.1733489822615,23.6908321974335,43.2374495777844,40.6419631014164,36.2888224674896,15.8481681015439,28.0186071158736,35.4079794613589,22.662798545123,7.95210098400125,15.626706890476,8.37637990358077,4.1176204162171,6.14740936462601,7.2826552954673,58.2902267226923,51.0939733346353,41.1144724842167,130.659354506123,34.4479747081106,41.3010023540807,39.8581293102281,53.1948402176378,31.6255641602937,6.54352163625172,7.25362142011344,5.71359458542189,69.7173071657416,48.1376179097111,46.9261603972473,27.3127222160457,25.3915670050576,22.8179305262225,95.2153135114261,87.1508900188917,94.9394201731876,93.9423044438626,86.6785740234242,62.6164230983466,69.9277315685229,18.664130215526,19.9808788730902,20.8221711737868,47.4180634110314,37.9893890436775,17.2712026893085,18.6898668485561,14.7075005857603,34.1359231098105,21.1960981221412,27.8027825193801,28.3555518619917,25.1591019906627,32.8175423450759,34.6186918761712,19.1339287410771,18.7941844765476,37.1232017696821,31.8912564989991,35.2294952609818,50.2821923732342,53.9580939162449,20.0006497204158,41.3003460951065,36.0384806865108,80.4157755540348,69.5260766669006,49.7309844678042,31.5999945296442,47.8909206444342,43.9038347778848,41.6940697922201,26.901093177346,16.6824420638613,2.54805239706646,0,39.6178605050522,34.2035818391383,37.9143333761088,23.9786147410026,16.8309624370662,35.3292290974283,45.2796702859615,41.7117705287633,50.5047938990768,46.724018571313,34.1007250693544,41.4699751387929,39.0568049020311,29.7874675255018,21.230653246797,23.1326595424795,12.8088080707028,13.5765070877862,42.8701050801681,23.7152445579353,16.3368431314495,22.9911349687732,9.94465533399138,14.3976655438418,9.91147771169905,29.2091746839404,20.5875271268382,20.2303506901712,28.5071885115333,27.872984849006,34.0772393077679,24.0117069340281,23.830411140974,18.5366386209039,34.6230179054134,71.3397891455147,31.8795085258624,31.4965883073858,30.9706863265201,22.756427493193,13.6072998302656,20.2419678050063,20.3332742294612,36.7358786449402,34.4908788692548,34.7955187508787,31.6712023495108,37.0440787802601,29.751055667139,36.5664774848275,37.6581309626537,28.4619001550445,14.7464769335779,12.610047448621,17.3339734631312,34.7971297859643,35.6479611171266,32.9513572473657,32.9075182463442,27.1534639811417,22.9857998202194,22.3232586960392,27.0956135413615,12.37712629092,23.2029388378007,19.2075932972541,18.7268950050927,19.1521983527185,23.7114124514335,15.8363574137239,22.9216043934899,22.9477285605804,9.58214470653014,24.0650015663825,40.098191100624,29.2618206544153,37.1138288607629,38.7232367276818,30.6881700505921,45.8443758931268,23.7264530772256,38.0454585412465,36.4436052760391,39.7912944082302,39.5777096851814,31.4586793028978,23.7751854862164,24.0960940637784,52.3483406630505,28.3336311272127,36.0664754153857,21.1797380959127,26.1835857676295,18.5158564510441,24.3460667928391,28.7839788560224,24.4918015432545,24.5560356204383,56.0295465194711,34.0364015660832,35.7737371106029,37.1022485435009,34.4862206360455,50.6472035480075,52.9621771705353,65.307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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18391
|HGNC=
|TSSclassifier=NA
|UniProt=A2AMS1,O55242,A2AMS0,B7ZJH9
|association_with_transcript=0bp_to_ENSMUST00000146655,NM_011014,uc008sjk.1,uc008sjl.1,uc012dcg.1_5end
|cluster_id=chr4:41688174..41688219,-
|description=CAGE_peak_1_at_Sigmar1_5end
|id=chr4:41688174..41688219,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005256!5.61e-11!47;UBERON:0002100!1.34e-10!98;UBERON:0009854!3.53e-10!23;UBERON:0009856!3.53e-10!23;UBERON:0002365!5.12e-10!25;UBERON:0002330!5.12e-10!25;UBERON:0002107!8.54e-10!22;UBERON:0007499!8.54e-10!22;UBERON:0006925!8.54e-10!22;UBERON:0009497!8.54e-10!22;UBERON:0000015!8.54e-10!22;UBERON:0002423!8.54e-10!22;UBERON:0006235!8.54e-10!22;UBERON:0008835!8.54e-10!22;UBERON:0003894!8.54e-10!22;UBERON:0004161!8.54e-10!22;UBERON:0008836!8.54e-10!22;UBERON:0005177!1.28e-09!85
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.68e-11,45;UBERON:0009854,3.53e-10,23;UBERON:0009856,3.53e-10,23;UBERON:0002365,5.12e-10,25;UBERON:0002330,5.12e-10,25;UBERON:0002107,8.54e-10,22;UBERON:0007499,8.54e-10,22;UBERON:0006925,8.54e-10,22;UBERON:0009497,8.54e-10,22;UBERON:0000015,8.54e-10,22;UBERON:0002423,8.54e-10,22;UBERON:0006235,8.54e-10,22;UBERON:0008835,8.54e-10,22;UBERON:0003894,8.54e-10,22;UBERON:0004161,8.54e-10,22;UBERON:0008836,8.54e-10,22;UBERON:0002100,1.97e-09,90;UBERON:0005177,2.83e-08,79;UBERON:0003104,1.21e-07,61;UBERON:0009142,1.21e-07,61
|phase1_expression=25.1433689954527,4.88565570695105,3.18499467572675,4.23449895829562,2.00358291978539,14.7733759282463,14.2503710763271,15.4947988129892,14.0788722151667,15.6823232635736,42.1196201834742,42.678105062505,14.8944635040149,18.6205457152464,11.9919514253639,13.1608923803387,2.79824751251259,9.93705820878449,11.9289557236993,7.63901373236454,18.1142208021779,19.5603173865744,15.4107875591972,18.7191134668286,21.1056538581796,5.7423196411502,9.47676391549965,14.0056301245828,27.1733489822615,23.6908321974335,43.2374495777844,40.6419631014164,36.2888224674896,15.8481681015439,28.0186071158736,35.4079794613589,22.662798545123,7.95210098400125,15.626706890476,8.37637990358077,4.1176204162171,6.14740936462601,7.2826552954673,58.2902267226923,51.0939733346353,41.1144724842167,130.659354506123,34.4479747081106,41.3010023540807,39.8581293102281,53.1948402176378,31.6255641602937,6.54352163625172,7.25362142011344,5.71359458542189,69.7173071657416,48.1376179097111,46.9261603972473,27.3127222160457,25.3915670050576,22.8179305262225,95.2153135114261,87.1508900188917,94.9394201731876,93.9423044438626,86.6785740234242,62.6164230983466,69.9277315685229,18.664130215526,19.9808788730902,20.8221711737868,47.4180634110314,37.9893890436775,17.2712026893085,18.6898668485561,14.7075005857603,34.1359231098105,21.1960981221412,27.8027825193801,28.3555518619917,25.1591019906627,32.8175423450759,34.6186918761712,19.1339287410771,18.7941844765476,37.1232017696821,31.8912564989991,35.2294952609818,50.2821923732342,53.9580939162449,20.0006497204158,41.3003460951065,36.0384806865108,80.4157755540348,69.5260766669006,49.7309844678042,31.5999945296442,47.8909206444342,43.9038347778848,41.6940697922201,26.901093177346,16.6824420638613,2.54805239706646,0,39.6178605050522,34.2035818391383,37.9143333761088,23.9786147410026,16.8309624370662,35.3292290974283,45.2796702859615,41.7117705287633,50.5047938990768,46.724018571313,34.1007250693544,41.4699751387929,39.0568049020311,29.7874675255018,21.230653246797,23.1326595424795,12.8088080707028,13.5765070877862,42.8701050801681,23.7152445579353,16.3368431314495,22.9911349687732,9.94465533399138,14.3976655438418,9.91147771169905,29.2091746839404,20.5875271268382,20.2303506901712,28.5071885115333,27.872984849006,34.0772393077679,24.0117069340281,23.830411140974,18.5366386209039,34.6230179054134,71.3397891455147,31.8795085258624,31.4965883073858,30.9706863265201,22.756427493193,13.6072998302656,20.2419678050063,20.3332742294612,36.7358786449402,34.4908788692548,34.7955187508787,31.6712023495108,37.0440787802601,29.751055667139,36.5664774848275,37.6581309626537,28.4619001550445,14.7464769335779,12.610047448621,17.3339734631312,34.7971297859643,35.6479611171266,32.9513572473657,32.9075182463442,27.1534639811417,22.9857998202194,22.3232586960392,27.0956135413615,12.37712629092,23.2029388378007,19.2075932972541,18.7268950050927,19.1521983527185,23.7114124514335,15.8363574137239,22.9216043934899,22.9477285605804,9.58214470653014,24.0650015663825,40.098191100624,29.2618206544153,37.1138288607629,38.7232367276818,30.6881700505921,45.8443758931268,23.7264530772256,38.0454585412465,36.4436052760391,39.7912944082302,39.5777096851814,31.4586793028978,23.7751854862164,24.0960940637784,52.3483406630505,28.3336311272127,36.0664754153857,21.1797380959127,26.1835857676295,18.5158564510441,24.3460667928391,28.7839788560224,24.4918015432545,24.5560356204383,56.0295465194711,34.0364015660832,35.7737371106029,37.1022485435009,34.4862206360455,50.6472035480075,52.9621771705353,65.307023201334,46.3706748576601,69.7385989497727,97.7623804386011,86.7088408067613,73.9529285281509,79.057188797446,94.1836420990039,87.8047208881328,28.4519912856571,37.140316707015,34.3856100292675,29.8751350964331,26.2853078083122,25.7959636460396,27.8511059836636,21.6598349122157,21.438379598442,19.4888926890922,22.0047580747332,25.8904037250866,27.2842271348115,25.8921814860906,46.7452980211744,44.0563603893155,69.3387624956841,33.6642830491774,38.8532427770457,39.6175500681647,46.5575244869758,16.1581393410799,26.1871822115493,27.7211508450613,21.1114929778143,27.720380562496,29.1866263047936,24.0615051170508,26.3126956088681,27.7643065015746,24.5078422326845,18.6366363524648,29.0977174676951,39.1744328067961,17.5917916101862,32.664084348562,42.4784442687881,39.330463057107,41.4183273041709,39.2298565892268,56.9932653259891,56.8755023696266,31.7866800596912,34.1721705708855,37.075727352011,41.0847785316561,45.3300016872495,43.3169281642385,31.3204437293485,32.9511802077298,39.1956811861746,36.8659700254339,34.9360260275279,29.9659613571479,30.4415688113924,28.9241701658869,33.7927259611743,27.114505070569,31.0945041257496,26.3818004706368,25.3499149912572,32.508666536276,30.4399477207998,30.8584891520715,23.3184669303881,39.6810146302491,15.3783792718067,30.5452564585569,17.0378965180135,11.6788443342908,13.2593400889394,12.1252431799457,3.90950388985867,6.29781535456461,5.52799895217695,56.3255664628917,40.965511168757,35.1742678129448,31.7535702016096,30.317802922098,32.3176594344343,34.7950013672837,32.1521942771557,33.5047605739558,33.5702780825744,27.3389297758247,7.32800820289447,34.8373552282471,41.5300811047315,35.3901162786167,44.5601390998172,35.1428741020819,18.3077292287376,23.6971980415989,18.2455259300737,10.3881171955183,9.50499020650956,14.5365115488962,29.8006066476541,25.1641845053827,18.1889152168913,19.334883132088,18.0800032850951,15.505212988076,12.4059202826645,12.7217726934666,12.574123098075,11.8974898461472,13.2542717806063,11.3529973135589,9.35015217452552,23.8066902795972,38.4035699337132,51.1368982674012,42.9784617892041,35.7400748959552,51.4249982736239,30.7694728769005,47.1610433973945,35.1100472824754,24.8490810751509,23.476587061866,24.0616115644547,20.1068223342114,16.4419804744954,24.9279986138601,27.0009000092722,30.621841819247,21.7508356312418,21.2281727818246,9.44464863016008,36.7102883528949,36.878458842893,32.5763000871514,9.85181864351517,12.501358574601,27.3363475195987,28.6388729562063,26.6362943961207,22.490051846978,23.8270541896825,28.6712038906836,21.2566221956633,24.6496836758747,25.1567354025586,26.6724467118521,23.1768651889711,22.9561972351809,25.1372399490017,23.4046283013692,27.0866709384478,23.0718548007139,25.0357999444687,24.4181979942312,23.056798201756,22.1690272676192,23.7806364734604,29.2007379696006,27.5682351107099,22.4456908663095,25.86243395107,25.2171474881442,18.415396942636,22.1559682895931,30.6721511460015,40.4693136259472,33.9200832245842,27.5034949181822,24.1023298406743,26.0297874561028,22.7230478908013
|short_description=p1@Sigmar1
}}

Latest revision as of 23:39, 26 September 2015

Short description:p1@Sigmar1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sigmar1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000146655, NM_011014, uc008sjk.1, uc008sjl.1, uc012dcg.1_5end
EntrezGene:Sigmar1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sigmar1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.11
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I214.01
Ileum epithelium, pool1.CNhs13199.10252-104B927.17
Ileum epithelium, pool2.CNhs13232.10253-104C123.69
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I340.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F635.41
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D858.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D951.09
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B341.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7130.66
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C234.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C339.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C453.19
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C169.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E148.14
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C546.93
Mouse Granule cells, donor1.CNhs12131.11713-123C327.31
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C695.22
Mouse Meningeal cells, donor3.CNhs12109.11639-122D187.15
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C794.94
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E793.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D286.68
Mouse Microglia, donor1.CNhs12629.11718-123C862.62
Mouse Microglia, donor2.CNhs12634.11736-123E869.93
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.82
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.23
Mouse Schwann, donor1.CNhs12507.11728-123D950.28
Mouse Schwann, donor2.CNhs12573.11746-123F953.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F741.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C436.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C880.42
Mouse hepatocyte, donor6.CNhs13090.11822-124F469.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F649.73
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I747.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E343.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I841.69
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G337.91
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.98
accessory axillary lymph node, adult.CNhs10475.1063-29H916.83
adrenal gland, adult.CNhs10508.49-24D735.33
adrenal gland, embryo E14.CNhs11038.406-44C545.28
adrenal gland, embryo E16.CNhs11004.1254-43D641.71
adrenal gland, embryo E17.CNhs11043.1263-45I150.50
adrenal gland, embryo E18.CNhs11026.1262-18F546.72
adrenal gland, neonate N00.CNhs11191.1311-23C134.10
adrenal gland, neonate N25.CNhs11223.1377-27I341.47
amnion, adult pregnant day17.5.CNhs10488.583-22A839.06
aorta, adult.CNhs10498.46-23H129.79
bone (os femoris), adult.CNhs10483.56-12G221.23
bone (os femoris), neonate N02.CNhs11227.1985-43F523.13
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H722.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.91
corpora quadrigemina, adult.CNhs10501.16-22A429.21
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F120.23
cortex, adult.CNhs10473.12-14D528.51
cortex, neonate N30.CNhs11107.1392-42F227.87
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B224.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.54
epididymis, adult.CNhs10490.58-23B234.62
eyeball, adult.CNhs10484.31-12G471.34
eyeball, embryo E12.CNhs11016.345-16C631.88
eyeball, embryo E14.CNhs10521.399-16E231.50
eyeball, embryo E15.CNhs10593.426-16C930.97
eyeball, embryo E17.CNhs11023.1261-18D422.76
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E720.24
eyeball, neonate N02.CNhs11205.1551-44G820.33
eyeball, neonate N16.CNhs11188.777-19A236.74
forelimb, embryo E11.CNhs10596.335-25E234.49
forelimb, embryo E12.CNhs10600.359-14H234.80
forelimb, embryo E13.CNhs10589.384-1E231.67
forelimb, embryo E14.CNhs10577.413-26A837.04
forelimb, embryo E15.CNhs11007.437-20E729.75
forelimb, embryo E17.CNhs10598.1517-43C436.57
forelimb, embryo E18.CNhs11008.1520-43B537.66
gonad, embryo E13.CNhs11044.1564-45I628.46
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.33
heart, embryo E11.CNhs10586.331-24E934.80
heart, embryo E12.CNhs11015.353-12F535.65
heart, embryo E13.CNhs11013.376-3I932.95
heart, embryo E14.CNhs10597.403-26D432.91
heart, embryo E15.CNhs11017.431-16C827.15
heart, embryo E16.CNhs11021.457-17C622.99
heart, embryo E17.CNhs11025.479-18E522.32
heart, embryo E18.CNhs11030.1283-20G327.10
heart, neonate N00.CNhs11213.639-21E312.38
heart, neonate N03.CNhs11221.1349-25I223.20
heart, neonate N10.CNhs11118.749-24G119.21
heart, neonate N16.CNhs11209.782-15G118.73
heart, neonate N20.CNhs11127.821-26I619.15
heart, neonate N25.CNhs11196.1351-25D323.71
heart, neonate N30.CNhs11202.1390-42D215.84
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G122.95
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A324.07
intestine, embryo E12.CNhs11019.1251-16I540.10
intestine, embryo E13.CNhs11010.381-16D529.26
intestine, embryo E15.CNhs10602.976-16D837.11
intestine, embryo E16.CNhs10585.463-22H438.72
intestine, embryo E17.CNhs10582.482-18D330.69
intestine, embryo E18.CNhs10526.1289-20F745.84
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E938.05
intestine, neonate N06.CNhs11102.688-20B836.44
intestine, neonate N07.CNhs11095.720-20F239.79
intestine, neonate N10.CNhs11098.755-23A539.58
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E323.78
intestine, neonate N30.CNhs11131.1384-42G124.10
kidney, embryo E14.CNhs10606.411-4I952.35
kidney, embryo E15.CNhs10997.434-16F828.33
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I221.18
kidney, embryo E18.CNhs11001.1288-20C726.18
kidney, neonate N00.CNhs11214.646-21G718.52
kidney, neonate N10.CNhs11206.758-6D524.35
kidney, neonate N20.CNhs11113.832-19I128.78
kidney, neonate N25.CNhs11122.1353-25F324.49
kidney, neonate N30.CNhs11203.1385-42H124.56
liver, adult pregnant day01.CNhs10466.508-5B256.03
liver, embryo E12.CNhs10601.355-15F834.04
liver, embryo E13.CNhs10524.378-3H635.77
liver, embryo E14.CNhs10594.409-16E137.10
liver, embryo E15.CNhs10520.433-16D734.49
liver, embryo E16.CNhs10523.462-17F550.65
liver, embryo E17.CNhs10510.481-18A352.96
liver, embryo E18.CNhs10579.499-43G465.31
liver, neonate N00.CNhs11117.641-24F446.37
liver, neonate N03.CNhs11123.1345-25G269.74
liver, neonate N06.CNhs11101.684-20A897.76
liver, neonate N07.CNhs11103.716-20H286.71
liver, neonate N10.CNhs11115.751-24B973.95
liver, neonate N20.CNhs11220.823-25A379.06
liver, neonate N25.CNhs11198.1368-26H194.18
liver, neonate N30.CNhs11106.1382-42D187.80
lung, adult.CNhs10474.28-22B128.45
lung, embryo E12.CNhs10522.354-16G237.14
lung, embryo E14.CNhs10604.404-26F834.39
lung, embryo E15.CNhs11020.432-17C529.88
lung, embryo E16.CNhs10998.458-17B626.29
lung, embryo E17.CNhs10605.480-44A625.80
lung, embryo E18.CNhs10583.1287-20I627.85
lung, neonate N00.CNhs11224.640-42C621.66
lung, neonate N06.CNhs11212.683-20E521.44
lung, neonate N07.CNhs11111.715-19A319.49
lung, neonate N10.CNhs11219.750-23E622.00
lung, neonate N20.CNhs11109.822-18A425.89
lung, neonate N25.CNhs11119.1359-25C727.28
lung, neonate N30.CNhs11133.1394-42H225.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A144.06
mammary gland, adult lactating day02.CNhs10480.595-22B669.34
mammary gland, adult pregnant day19.CNhs10476.588-5H233.66
medulla oblongata, adult.CNhs10477.17-12C238.85
medulla oblongata, neonate N30.CNhs11200.1396-42A339.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.19
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.76
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.51
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I729.10
ovary, embryo E18.CNhs11040.505-44H739.17
ovary, neonate N00.CNhs11217.1299-22I417.59
oviduct, adult pregnant day01.CNhs10500.988-6G632.66
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F439.33
pancreas, embryo E15.CNhs11042.1556-45F241.42
pancreas, embryo E16.CNhs11003.460-26E539.23
pancreas, embryo E17.CNhs10599.1558-45G356.99
pancreas, embryo E18.CNhs10580.1535-43I756.88
pancreas, neonate N00.CNhs11105.645-26G931.79
pancreas, neonate N01.CNhs11138.1531-43D734.17
pancreas, neonate N02.CNhs11139.1539-43D837.08
pancreas, neonate N16.CNhs11136.787-43B641.08
pancreas, neonate N25.CNhs11094.1555-45E245.33
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E632.95
pituitary gland, embryo E13.CNhs11009.370-44C739.20
pituitary gland, embryo E14.CNhs11037.398-44A536.87
pituitary gland, embryo E15.CNhs10592.427-16B934.94
pituitary gland, embryo E16.CNhs11036.449-43F629.97
pituitary gland, embryo E17.CNhs11039.1265-44F530.44
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I733.79
placenta, adult pregnant day17.CNhs10464.577-18G327.11
prostate, adult.CNhs10470.859-1F831.09
skin, adult.CNhs10492.30-1C326.38
skin, neonate N00.CNhs11124.650-25G425.35
skin, neonate N03.CNhs11215.662-22H332.51
skin, neonate N06.CNhs11097.693-20I530.44
skin, neonate N10.CNhs11108.762-6C430.86
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C939.68
spleen, adult.CNhs10465.25-2G215.38
spleen, embryo E16.CNhs11035.461-43C130.55
spleen, embryo E18.CNhs11011.1271-21F217.04
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H113.26
spleen, neonate N25.CNhs11099.1354-25G312.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H656.33
stomach, embryo E12.CNhs10588.356-43E340.97
stomach, embryo E15.CNhs10603.1252-16G835.17
stomach, embryo E16.CNhs11022.459-17D431.75
stomach, embryo E17.CNhs11006.1035-18D530.32
stomach, embryo E18.CNhs10999.1286-20C632.32
stomach, neonate N03.CNhs11193.1340-24B834.80
stomach, neonate N07.CNhs11210.718-18A932.15
stomach, neonate N25.CNhs11104.1355-25E433.50
stomach, neonate N30.CNhs11134.1386-42I133.57
submandibular gland, adult.CNhs10469.59-29C127.34
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F534.84
testis, embryo E15.CNhs11034.443-27C541.53
testis, embryo E16.CNhs11033.470-26G535.39
testis, embryo E17.CNhs11029.486-18I544.56
testis, embryo E18.CNhs11027.503-18G535.14
testis, neonate N00.CNhs11189.1300-22B718.31
testis, neonate N07.CNhs11222.726-26I423.70
testis, neonate N10.CNhs11204.763-44D918.25
testis, neonate N20.CNhs11110.839-18H310.39
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I429.80
thymus, embryo E15.CNhs11005.430-45I225.16
thymus, embryo E16.CNhs11002.456-26C518.19
thymus, embryo E17.CNhs10581.478-18C119.33
thymus, embryo E18.CNhs10595.1273-19G418.08
thymus, neonate N02.CNhs11181.1541-43F815.51
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C412.72
thymus, neonate N07.CNhs11211.713-19D312.57
thymus, neonate N10.CNhs11194.748-24E411.90
thymus, neonate N20.CNhs11186.820-7A213.25
thymus, neonate N25.CNhs11125.1362-25G711.35
thymus, neonate N30.CNhs11132.1393-42G29.35
tongue, adult.CNhs10499.32-1B423.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H338.40
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F751.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G542.98
urinary bladder, adult.CNhs10481.879-12E435.74
uterus, adult pregnant day19.CNhs10497.590-15F551.42
uterus, adult.CNhs10509.92-27E530.77
vagina, adult.CNhs10502.89-27D547.16
vesicular gland, adult.CNhs10491.51-27F835.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I89.44
whole body, embryo E12.CNhs10587.857-27C936.71
whole body, embryo E13.CNhs10512.372-23H236.88
whole body, embryo E14.5.CNhs10578.420-27D232.58
whole body, embryo E14.CNhs10519.395-14B19.85
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.49
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.42
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.16
whole body, embryo E17.5.CNhs10513.490-9F930.67
whole body, embryo E17.CNhs10517.475-3I540.47
whole body, embryo E18.CNhs10516.493-3B333.92
whole body, neonate N00.CNhs10525.657-19C227.50
whole body, neonate N01.CNhs10576.659-23C624.10
whole body, neonate N06.CNhs10515.692-21D126.03
whole body, neonate N10.CNhs10518.761-6B422.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk mesenchyme1.68e-1145
digestive tract diverticulum3.53e-1023
sac3.53e-1023
exocrine gland5.12e-1025
exocrine system5.12e-1025
liver8.54e-1022
epithelial sac8.54e-1022
digestive gland8.54e-1022
epithelium of foregut-midgut junction8.54e-1022
anatomical boundary8.54e-1022
hepatobiliary system8.54e-1022
foregut-midgut junction8.54e-1022
hepatic diverticulum8.54e-1022
liver primordium8.54e-1022
septum transversum8.54e-1022
liver bud8.54e-1022
trunk1.97e-0990
trunk region element2.83e-0879
mesenchyme1.21e-0761
entire embryonic mesenchyme1.21e-0761
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