FFCP PHASE1:Mm9::chr9:86465382..86465454,-: Difference between revisions
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{{FFCP|EntrezGene=109785|HGNC=|MCL_coexpression_id=1817|UniProt=Q9CYR6,Q8BWW3,Q8BLS4,Q8BME1|association_with_transcript=0bp_to_ENSMUST00000070064,ENSMUST00000072585,NM_001163746,NM_028352,uc009qxm.2,uc009qxn.2,uc009qxo.2,uc012gxq.1_5end|description=CAGE_peak_1_at_Pgm3_5end|id=chr9:86465382..86465454,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.23e-19!43;UBERON:0005409!9.04e-14!59;UBERON:0004119!4.50e-09!130;UBERON:0000925!4.50e-09!130;UBERON:0006595!4.50e-09!130;UBERON:0001007!1.47e-08!128;UBERON:0001555!1.47e-08!128;UBERON:0007026!1.47e-08!128;UBERON:0000344!1.55e-08!15;UBERON:0004921!6.67e-08!126;UBERON:0004185!6.67e-08!126;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0002108!2.66e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.65e-15,31;UBERON:0005409,1.02e-09,47;UBERON:0000344,1.55e-08,15;UBERON:0001242,1.19e-07,13;UBERON:0001262,1.19e-07,13;UBERON:0004786,1.19e-07,13;UBERON:0002100,5.14e-07,90|phase1_expression=17.4562243344225,53.7422127764616,48.2299193752908,39.6228116811947,45.0806156951712,32.4006994789947,34.5746708081378,10.0716192284429,10.13678799492,10.7669682108117,14.8959632356189,16.6723812300253,9.24483941628511,11.1023911072127,2.6648780945253,4.85940641735582,2.79824751251259,10.0947892914636,10.1464680868247,9.76096199135469,13.351796553718,12.5106598513115,15.9331871374751,27.518696720466,36.47607568968,51.1066448062368,47.8145815736573,42.4478328391201,40.2849649247513,36.29233868543,39.0245698753336,8.89042942843484,7.99584223859941,15.8481681015439,25.7077941578634,22.607911768755,22.4586291888606,5.02237956884289,8.5946887897618,6.28228492768558,3.52938892818609,4.09827290975067,4.36959317728038,25.5570540490422,23.2153172492688,26.6142790634438,7.04152209913235,5.23260375313072,7.46933021297204,9.52706505463989,12.3188051030319,2.87505128729943,11.2414346058683,5.07753499407941,10.0828139742739,31.9001700684574,26.3610764743656,19.0798674142654,8.29497489524351,8.99284664762456,11.4089652631112,7.79342423759004,12.450127145556,3.5995988691256,3.9554654502679,4.9733608046227,1.79760066311043,2.68952813725088,13.5833392124106,11.4755047581937,15.1433972172995,7.14127461009509,7.73039893330647,15.6788222995141,18.3064849644831,11.9498442259303,11.0115880999389,13.0241084846891,13.0565553267807,10.1552441552249,14.9124859071928,16.6692278578163,10.8881369610539,11.2552522006336,14.3630352910202,13.8475435172624,18.0812034614861,10.4383689662168,23.4751199332871,18.4394606660557,7.8263411949453,11.185510400758,11.5595126730318,10.2543606411185,14.9448576012964,14.3368603871147,12.0782201313307,13.8048561288227,7.53379413348319,5.65343319216544,23.6616945224823,1.28326477414318,0,7.11066703153331,15.154372870785,13.4280728701802,15.6712577954583,17.8126852361734,19.1614033898907,15.5864246018066,18.2159593104443,33.1867371360234,40.8189430143224,36.6256016542873,36.4524992120685,14.5773245942424,38.3152199988279,14.1707369781513,7.96149496754887,22.4855921426899,11.9254419968613,17.9403843660032,31.6865994070808,10.5401086924157,10.6817820474862,36.5303588948286,13.4192939446631,14.9975682748352,13.3423738426718,13.481157546434,13.2675174817402,15.3298309577695,10.6032835317289,13.5529192385075,12.0517065844545,11.1946471516753,20.7752302254645,21.397998944936,31.084899287342,5.26104639716185,20.1686686592191,22.5304062344803,20.8872070574205,21.2493793148358,17.8255627776479,22.8042422107033,17.3348190435498,8.53721123438752,15.5208954911646,16.8304411349359,16.3634545472472,16.6588756644957,19.7413546950174,18.805616992197,18.7261744131229,16.3208098791164,16.8531164955176,15.4408744268829,22.4489164522518,12.0132948070591,15.2441938987713,18.3663302690235,13.2577051927718,11.8058539048442,14.0383072727514,13.2544348507732,12.0723030629829,12.37712629092,11.1900697941167,12.4767272700112,7.78260571640215,9.79539915749726,9.00155472693308,6.44190810049784,13.4585567081041,19.9634948015812,46.5890484007155,48.9233548327557,17.9162130449597,13.4697269679054,16.8816374331942,24.2020229548011,27.5748774367639,33.0992589435853,46.9783770929066,76.255616037217,54.0370698920579,54.9119862833576,56.3446211774257,35.9527763461689,46.2535426731846,45.8024928485045,12.1387456609972,16.4517858158009,16.9061603509621,20.3651327845314,19.0073437424273,21.0407459670956,25.1049052383301,27.0126570802672,31.7137430239577,27.5175675545615,14.5261787272703,10.3443965543978,13.7591296579242,14.1663130802458,16.2288097110802,18.0882869814313,23.9348300674535,20.4264257590076,21.7261203878547,66.9929848178919,77.6348315247715,66.9853705803306,52.1102914101316,26.7733610623938,29.2417784040717,19.7801843758981,20.1380977281599,19.8965982359009,19.7187621494851,21.3878808076737,20.8874320976767,17.0856382590652,14.0445748122748,15.8058254764817,18.6009470045305,19.2674279994434,19.4534817762134,15.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109785 | |||
|HGNC= | |||
|MCL_coexpression_id=1817 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CYR6,Q8BWW3,Q8BLS4,Q8BME1 | |||
|association_with_transcript=0bp_to_ENSMUST00000070064,ENSMUST00000072585,NM_001163746,NM_028352,uc009qxm.2,uc009qxn.2,uc009qxo.2,uc012gxq.1_5end | |||
|cluster_id=chr9:86465382..86465454,- | |||
|description=CAGE_peak_1_at_Pgm3_5end | |||
|id=chr9:86465382..86465454,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.23e-19!43;UBERON:0005409!9.04e-14!59;UBERON:0004119!4.50e-09!130;UBERON:0000925!4.50e-09!130;UBERON:0006595!4.50e-09!130;UBERON:0001007!1.47e-08!128;UBERON:0001555!1.47e-08!128;UBERON:0007026!1.47e-08!128;UBERON:0000344!1.55e-08!15;UBERON:0004921!6.67e-08!126;UBERON:0004185!6.67e-08!126;UBERON:0001242!1.19e-07!13;UBERON:0000060!1.19e-07!13;UBERON:0001262!1.19e-07!13;UBERON:0004786!1.19e-07!13;UBERON:0002108!2.66e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.65e-15,31;UBERON:0005409,1.02e-09,47;UBERON:0000344,1.55e-08,15;UBERON:0001242,1.19e-07,13;UBERON:0001262,1.19e-07,13;UBERON:0004786,1.19e-07,13;UBERON:0002100,5.14e-07,90 | |||
|phase1_expression=17.4562243344225,53.7422127764616,48.2299193752908,39.6228116811947,45.0806156951712,32.4006994789947,34.5746708081378,10.0716192284429,10.13678799492,10.7669682108117,14.8959632356189,16.6723812300253,9.24483941628511,11.1023911072127,2.6648780945253,4.85940641735582,2.79824751251259,10.0947892914636,10.1464680868247,9.76096199135469,13.351796553718,12.5106598513115,15.9331871374751,27.518696720466,36.47607568968,51.1066448062368,47.8145815736573,42.4478328391201,40.2849649247513,36.29233868543,39.0245698753336,8.89042942843484,7.99584223859941,15.8481681015439,25.7077941578634,22.607911768755,22.4586291888606,5.02237956884289,8.5946887897618,6.28228492768558,3.52938892818609,4.09827290975067,4.36959317728038,25.5570540490422,23.2153172492688,26.6142790634438,7.04152209913235,5.23260375313072,7.46933021297204,9.52706505463989,12.3188051030319,2.87505128729943,11.2414346058683,5.07753499407941,10.0828139742739,31.9001700684574,26.3610764743656,19.0798674142654,8.29497489524351,8.99284664762456,11.4089652631112,7.79342423759004,12.450127145556,3.5995988691256,3.9554654502679,4.9733608046227,1.79760066311043,2.68952813725088,13.5833392124106,11.4755047581937,15.1433972172995,7.14127461009509,7.73039893330647,15.6788222995141,18.3064849644831,11.9498442259303,11.0115880999389,13.0241084846891,13.0565553267807,10.1552441552249,14.9124859071928,16.6692278578163,10.8881369610539,11.2552522006336,14.3630352910202,13.8475435172624,18.0812034614861,10.4383689662168,23.4751199332871,18.4394606660557,7.8263411949453,11.185510400758,11.5595126730318,10.2543606411185,14.9448576012964,14.3368603871147,12.0782201313307,13.8048561288227,7.53379413348319,5.65343319216544,23.6616945224823,1.28326477414318,0,7.11066703153331,15.154372870785,13.4280728701802,15.6712577954583,17.8126852361734,19.1614033898907,15.5864246018066,18.2159593104443,33.1867371360234,40.8189430143224,36.6256016542873,36.4524992120685,14.5773245942424,38.3152199988279,14.1707369781513,7.96149496754887,22.4855921426899,11.9254419968613,17.9403843660032,31.6865994070808,10.5401086924157,10.6817820474862,36.5303588948286,13.4192939446631,14.9975682748352,13.3423738426718,13.481157546434,13.2675174817402,15.3298309577695,10.6032835317289,13.5529192385075,12.0517065844545,11.1946471516753,20.7752302254645,21.397998944936,31.084899287342,5.26104639716185,20.1686686592191,22.5304062344803,20.8872070574205,21.2493793148358,17.8255627776479,22.8042422107033,17.3348190435498,8.53721123438752,15.5208954911646,16.8304411349359,16.3634545472472,16.6588756644957,19.7413546950174,18.805616992197,18.7261744131229,16.3208098791164,16.8531164955176,15.4408744268829,22.4489164522518,12.0132948070591,15.2441938987713,18.3663302690235,13.2577051927718,11.8058539048442,14.0383072727514,13.2544348507732,12.0723030629829,12.37712629092,11.1900697941167,12.4767272700112,7.78260571640215,9.79539915749726,9.00155472693308,6.44190810049784,13.4585567081041,19.9634948015812,46.5890484007155,48.9233548327557,17.9162130449597,13.4697269679054,16.8816374331942,24.2020229548011,27.5748774367639,33.0992589435853,46.9783770929066,76.255616037217,54.0370698920579,54.9119862833576,56.3446211774257,35.9527763461689,46.2535426731846,45.8024928485045,12.1387456609972,16.4517858158009,16.9061603509621,20.3651327845314,19.0073437424273,21.0407459670956,25.1049052383301,27.0126570802672,31.7137430239577,27.5175675545615,14.5261787272703,10.3443965543978,13.7591296579242,14.1663130802458,16.2288097110802,18.0882869814313,23.9348300674535,20.4264257590076,21.7261203878547,66.9929848178919,77.6348315247715,66.9853705803306,52.1102914101316,26.7733610623938,29.2417784040717,19.7801843758981,20.1380977281599,19.8965982359009,19.7187621494851,21.3878808076737,20.8874320976767,17.0856382590652,14.0445748122748,15.8058254764817,18.6009470045305,19.2674279994434,19.4534817762134,15.8947415274266,19.6860879327121,15.3328002096402,1.50791283939272,9.24639662491806,16.7199852826472,22.3508764506833,14.4495530989013,12.8932855251423,14.0984053023941,9.59389523376617,9.4652465824877,11.3227235846025,8.83235930704476,9.79772071605463,14.2591151412732,7.64306633129848,5.66734982344852,7.89090816360542,7.11518000303742,8.67567554338879,14.6198287764517,13.8891170860459,17.4289046508326,12.8676695918578,19.9117707509944,15.0523994416088,21.4649725444973,27.3477365646052,24.2147552162234,26.7468578711217,37.2136742162238,29.0826983582004,32.4412614330096,36.6602639205547,30.5713964867496,27.8465966770104,48.6828636227917,17.8260483090997,10.9954881215341,19.5046701878749,15.9606210278046,18.0152505778091,22.3786668018885,18.267896946876,20.8857820176702,26.2671767871137,90.8576999986443,9.72828892354732,19.8601244835964,19.4810747517943,15.1602876883983,12.4747083806247,54.2154356131522,14.8340241608408,8.37267315909478,9.90656966223468,8.70414278637645,5.46268525313604,5.74115756428306,6.86334519619568,10.1987057996313,9.6566502103324,10.9177979305495,13.3653886522116,14.0769517143605,18.502071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| |||
|short_description=p1@Pgm3 | |||
}} |
Latest revision as of 05:33, 27 September 2015
Short description: | p1@Pgm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pgm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1817 |
Association with transcript: | 0bp_to_ENSMUST00000070064, ENSMUST00000072585, NM_001163746, NM_028352, uc009qxm.2, uc009qxn.2, uc009qxo.2, uc012gxq.1_5end |
EntrezGene: | Pgm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.65e-15 | 31 |
gastrointestinal system | 1.02e-09 | 47 |
mucosa | 1.55e-08 | 15 |
intestinal mucosa | 1.19e-07 | 13 |
wall of intestine | 1.19e-07 | 13 |
gastrointestinal system mucosa | 1.19e-07 | 13 |
trunk | 5.14e-07 | 90 |