Personal tools

FFCP PHASE1:Mm9::chr3:10366903..10366922,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:10366903..10366922,+ |short_description=p3@Chmp4c |description=CAGE_peak_3_at_Chmp4c_5end |association_with_transcript=0bp_to_ENSMUST00000029049_5end |Ent...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:10366903..10366922,+
|DHSsupport=NA
|short_description=p3@Chmp4c
|DPIdataset=NA
|description=CAGE_peak_3_at_Chmp4c_5end
|association_with_transcript=0bp_to_ENSMUST00000029049_5end
|EntrezGene=66371
|EntrezGene=66371
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q9D7F7
|UniProt=Q9D7F7
|association_with_transcript=0bp_to_ENSMUST00000029049_5end
|cluster_id=chr3:10366903..10366922,+
|description=CAGE_peak_3_at_Chmp4c_5end
|id=chr3:10366903..10366922,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,2.59e-10,25;CL:0002563,7.56e-09,9;CL:0002251,7.56e-09,9;CL:0000075,5.98e-08,7;CL:0002076,1.65e-07,15;CL:0000239,3.06e-07,6;CL:0000677,3.06e-07,6;CL:0000584,3.06e-07,6;CL:0000223,6.32e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!9.33e-19!43;UBERON:0005409!6.70e-16!59;UBERON:0004119!6.25e-14!130;UBERON:0000925!6.25e-14!130;UBERON:0006595!6.25e-14!130;UBERON:0001007!4.55e-13!128;UBERON:0001555!4.55e-13!128;UBERON:0007026!4.55e-13!128;UBERON:0004921!4.26e-12!126;UBERON:0004185!4.26e-12!126;UBERON:0000344!3.41e-10!15;UBERON:0001242!5.43e-09!13;UBERON:0000060!5.43e-09!13;UBERON:0001262!5.43e-09!13;UBERON:0004786!5.43e-09!13;UBERON:0000481!8.13e-09!230;UBERON:0000485!3.98e-07!11;UBERON:0002108!7.95e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.27e-18,31;UBERON:0005409,5.23e-15,47;UBERON:0000344,3.26e-14,15;UBERON:0001242,1.88e-12,13;UBERON:0001262,1.88e-12,13;UBERON:0004786,1.88e-12,13;UBERON:0004923,1.69e-10,24;UBERON:0004119,3.65e-10,118;UBERON:0000925,3.65e-10,118;UBERON:0006595,3.65e-10,118;UBERON:0000485,1.00e-09,11;UBERON:0001007,2.96e-09,116;UBERON:0001555,2.96e-09,116;UBERON:0007026,2.96e-09,116;UBERON:0003350,7.56e-09,9;UBERON:0004808,7.56e-09,9;UBERON:0001277,7.56e-09,9;UBERON:0004921,2.98e-08,114;UBERON:0007023,3.89e-07,51
|phase1_expression=1.44133962394315,13.6100408979351,12.2849794635175,9.0739263392049,10.0179145989269,7.72244650794693,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0.261199789138935,7.35965144849671,3.67054849707472,7.46501553349526,7.75371593086335,5.17130958446134,4.56056206695297,7.56090389279792,6.43018480900384,0,0,0,2.3108129580102,2.1610503896604,3.87921776898501,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,0,0.218025156380447,1.5378032791413,0.58328969722285,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302286240427142,4.05810284182349,0.860423876981386,3.39985666853875,0,0,0.896053774194671,0.842666520790511,0.170430322578058,0.519572009205738,0.35333957451034,3.52108549441701,0,2.54805239706646,0,2.59789249213457,2.28023878927589,0,2.2836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,1.61430848079241,1.50722640552623,1.52865319276416,0.251333182659351,3.70792451601561,1.73519228303894,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.622034853050465,3.53811861807145,3.15662783829711,0.260240885925407,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,2.58703370739016,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,1.08037236876609,2.60419209143731,2.95146347621106,0.925602677324269,2.32533944750408,3.21928081679543,3.03589890154641,4.44311594766397,2.95501435342371,2.99954595319666,3.07019973593198,3.95190207523891,3.62357330653004,0,0.102904612379284,3.63460661282178,5.02456076660734,0.426576501070468,0.928946687441754,0.515469845288373,2.21851877085677,1.33426826306922,3.23383564391351,5.21981967698963,5.43506550589236,6.53471542880701,5.37182474511107,4.09424582950152,0.898819408654221,4.10662294761919,3.98282546508734,0.569003702859245,0.342745537829186,1.1270773567308,1.01825663922657,0.969762435838129,1.1221731182451,1.96033265085198,2.50937251565324,2.04098346193787,1.35736880313981,1.48226313543574,0.166845105716094,0.982794975566015,0.224862112384854,0.811440485554012,0.72353147925725,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,1.11642284300551,0.624075346229121,1.01031551178845,1.61457672169721,0,1.66277871149944,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,1.6663054862021,1.17080188714679,1.10344600874334,0.8858587585951,0.637819074629948,1.63863314715738,2.24490476425664,1.88043776155965,0,0,0.983528546038072,2.48343071674259,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0.709700426041343,0,0.162886959353576,0.659880491890142,3.98235415019888,0.728341908464944,0.906970670894253,1.50884063804718,1.18120757152309,2.15204603560749,2.06742634534577,2.54473610634254,2.13898427030833,2.52829406348653,1.05418608574999,3.09406629744561,1.36175842301515,0.18006109403131,0.388076051348264,0.857348140126369,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,2.81606049676452,3.38931313382112,2.8668691747145,2.4732937941222,0.968786560175433,1.38719727334758,1.79058516004705,3.28281799490123,4.08073171281791,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,3.81868247206045,0.474503990371703,0.406638934253697,1.08005340821801,1.04544148007234,1.52853794622324,0.944050424693745,2.0663363931334,2.35580347785627,1.94422459937689,4.34937519160848,0,0.598066184175915,0.330916980914195,1.94451188344048,1.42075805825504,0.844780627453891,0.58678619322877,1.95306577265925,1.25831213310853,0,0,0.632022241256357,0.405450430580328,0.821687657318618,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0,0.487289403698762,0.288635524920988,0.350630706544707,4.0811469050738,0.887943813496259,0.538283139656854,0.839423081820392,2.12508553435409,1.87682475451182,0.73260649706906,1.50057865355346,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,0,0.468207537349412,0.576226371643824,0.516919220600519,0.476293691283074,0.463537303779422,0,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.474540072496697,0.985044823755635,0.818462086339379,0.309873682371932,0.964533054905707,0,1.63752125911786,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=1.44133962394315,13.6100408979351,12.2849794635175,9.0739263392049,10.0179145989269,7.72244650794693,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0.261199789138935,7.35965144849671,3.67054849707472,7.46501553349526,7.75371593086335,5.17130958446134,4.56056206695297,7.56090389279792,6.43018480900384,0,0,0,2.3108129580102,2.1610503896604,3.87921776898501,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,0,0.218025156380447,1.5378032791413,0.58328969722285,0.419959264876088,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302286240427142,4.05810284182349,0.860423876981386,3.39985666853875,0,0,0.896053774194671,0.842666520790511,0.170430322578058,0.519572009205738,0.35333957451034,3.52108549441701,0,2.54805239706646,0,2.59789249213457,2.28023878927589,0,2.2836775943812,0,0.148442139064825,0.346970653532272,0.304465478312141,1.61430848079241,1.50722640552623,1.52865319276416,0.251333182659351,3.70792451601561,1.73519228303894,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.622034853050465,3.53811861807145,3.15662783829711,0.260240885925407,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.374806898238915,2.58703370739016,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0.696504333044333,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,1.08037236876609,2.60419209143731,2.95146347621106,0.925602677324269,2.32533944750408,3.21928081679543,3.03589890154641,4.44311594766397,2.95501435342371,2.99954595319666,3.07019973593198,3.95190207523891,3.62357330653004,0,0.102904612379284,3.63460661282178,5.02456076660734,0.426576501070468,0.928946687441754,0.515469845288373,2.21851877085677,1.33426826306922,3.23383564391351,5.21981967698963,5.43506550589236,6.53471542880701,5.37182474511107,4.09424582950152,0.898819408654221,4.10662294761919,3.98282546508734,0.569003702859245,0.342745537829186,1.1270773567308,1.01825663922657,0.969762435838129,1.1221731182451,1.96033265085198,2.50937251565324,2.04098346193787,1.35736880313981,1.48226313543574,0.166845105716094,0.982794975566015,0.224862112384854,0.811440485554012,0.72353147925725,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,1.11642284300551,0.624075346229121,1.01031551178845,1.61457672169721,0,1.66277871149944,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,1.6663054862021,1.17080188714679,1.10344600874334,0.8858587585951,0.637819074629948,1.63863314715738,2.24490476425664,1.88043776155965,0,0,0.983528546038072,2.48343071674259,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0.790575555893047,0,0.709700426041343,0,0.162886959353576,0.659880491890142,3.98235415019888,0.728341908464944,0.906970670894253,1.50884063804718,1.18120757152309,2.15204603560749,2.06742634534577,2.54473610634254,2.13898427030833,2.52829406348653,1.05418608574999,3.09406629744561,1.36175842301515,0.18006109403131,0.388076051348264,0.857348140126369,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,2.81606049676452,3.38931313382112,2.8668691747145,2.4732937941222,0.968786560175433,1.38719727334758,1.79058516004705,3.28281799490123,4.08073171281791,0,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,3.81868247206045,0.474503990371703,0.406638934253697,1.08005340821801,1.04544148007234,1.52853794622324,0.944050424693745,2.0663363931334,2.35580347785627,1.94422459937689,4.34937519160848,0,0.598066184175915,0.330916980914195,1.94451188344048,1.42075805825504,0.844780627453891,0.58678619322877,1.95306577265925,1.25831213310853,0,0,0.632022241256357,0.405450430580328,0.821687657318618,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0,0.487289403698762,0.288635524920988,0.350630706544707,4.0811469050738,0.887943813496259,0.538283139656854,0.839423081820392,2.12508553435409,1.87682475451182,0.73260649706906,1.50057865355346,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.962757628775446,0.505394423527595,0.760437899670719,0,0.468207537349412,0.576226371643824,0.516919220600519,0.476293691283074,0.463537303779422,0,0.412085900803307,0.441596760403192,0.342869252385415,0.887379030796687,0.238436189947321,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.263069711437843,0.814824683075171,0.561142271657738,0.474540072496697,0.985044823755635,0.818462086339379,0.309873682371932,0.964533054905707,0,1.63752125911786,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p3@Chmp4c
}}
}}

Latest revision as of 05:37, 27 September 2015

Short description:p3@Chmp4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chmp4c_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000029049_5end
EntrezGene:Chmp4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chmp4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.96
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:10366903..10366922,%2B&oldid=4295145"