Personal tools

FFCP PHASE1:Mm9::chr3:10366927..10366963,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66371
|EntrezGene=66371
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q9D7F7
|UniProt=Q9D7F7
|association_with_transcript=-9bp_to_NM_025519,uc008opu.1,uc012cni.1_5end
|association_with_transcript=-9bp_to_NM_025519,uc008opu.1,uc012cni.1_5end
|cluster_id=chr3:10366927..10366963,+
|description=CAGE_peak_1_at_Chmp4c_5end
|description=CAGE_peak_1_at_Chmp4c_5end
|id=chr3:10366927..10366963,+
|id=chr3:10366927..10366963,+
|ontology_enrichment_celltype=CL:0002563!3.66e-07!9;CL:0002251!3.66e-07!9;CL:0000066!5.43e-07!25
|ontology_enrichment_celltype=CL:0002563!3.66e-07!9;CL:0002251!3.66e-07!9;CL:0000066!5.43e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,6.07e-08,25;CL:0002563,1.57e-07,9;CL:0002251,1.57e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.04e-22!43;UBERON:0005409!4.47e-21!59;UBERON:0004119!2.09e-18!130;UBERON:0000925!2.09e-18!130;UBERON:0006595!2.09e-18!130;UBERON:0001007!1.21e-17!128;UBERON:0001555!1.21e-17!128;UBERON:0007026!1.21e-17!128;UBERON:0004921!1.51e-16!126;UBERON:0004185!1.51e-16!126;UBERON:0000344!6.52e-11!15;UBERON:0001242!8.87e-10!13;UBERON:0000060!8.87e-10!13;UBERON:0001262!8.87e-10!13;UBERON:0004786!8.87e-10!13;UBERON:0002108!2.33e-08!16;UBERON:0000485!3.56e-07!11;UBERON:0003350!3.66e-07!9;UBERON:0004808!3.66e-07!9;UBERON:0001277!3.66e-07!9;UBERON:0004923!4.04e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-19,31;UBERON:0005409,5.07e-16,47;UBERON:0004119,6.13e-13,118;UBERON:0000925,6.13e-13,118;UBERON:0006595,6.13e-13,118;UBERON:0001007,2.86e-12,116;UBERON:0001555,2.86e-12,116;UBERON:0007026,2.86e-12,116;UBERON:0000344,1.60e-11,15;UBERON:0004921,2.56e-11,114;UBERON:0001242,2.58e-10,13;UBERON:0001262,2.58e-10,13;UBERON:0004786,2.58e-10,13;UBERON:0000485,1.53e-07,11;UBERON:0003350,1.57e-07,9;UBERON:0004808,1.57e-07,9;UBERON:0001277,1.57e-07,9;UBERON:0004923,3.14e-07,24
|phase1_expression=3.68342348341026,188.446720125255,195.194673698111,238.644262721089,271.986381360867,88.6402555694778,77.5593966777145,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,76.6363705180418,60.7934594828001,162.507645844551,130.090122840041,115.277109486951,114.964168771106,141.640932925081,79.8229838359097,0,0,0,67.302427402047,57.1847180033214,67.1717182103194,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0,0,0.659058548203415,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.453429360640713,41.7404863730416,3.44169550792555,18.3592260101093,0,0,4.03224198387602,8.56710962803686,0.511290967734173,0,0.35333957451034,12.9575946194546,3.84979432242953,0,0,22.0820861831438,19.2553497761075,21.7375511356357,28.6601538094841,1.03575153458869,0.742210695324124,0.867426633830679,2.43572382649713,5.07354093963329,2.86373017049983,2.93971767839262,1.13099932196708,41.2815596116404,7.37456720291549,0,0.485300549842228,0.441683036920787,0.484875253135222,76.4206220994301,0.292780797011547,0.209446706813455,87.8772269917554,0,0,0,0,0,0,0.173824320192276,0,0,0,0.916554274652847,3.11017426525233,12.1306924048164,8.41767423545896,0.520481771850815,0.229902104433473,0.360124259610698,2.10986744970001,0.748401490664606,1.2811372028485,1.49922759295566,6.46758426847539,0.646703978798527,0.378212160335639,0.879755620819744,1.09597866213787,1.39023624612799,8.70630416305416,9.05441400194951,2.7864797354589,0,0,0,0.414251545071004,2.34526059981096,1.44049649168812,1.18372367792605,3.93528463494808,4.16521204795921,6.97601834251224,6.43856163359086,6.889155199663,4.44311594766397,6.7308660272429,5.91802309684747,8.18719929581861,10.3188554186794,9.79706856950714,0.420579897128254,0,178.426142811251,80.9218733990446,1.06644125267617,3.94802342162745,10.0516619831233,18.3532007407242,22.4601824283319,29.1045207952215,77.3482370317554,37.5513616770745,44.2349967488474,51.9276392027404,45.6215963858741,77.2984691442631,100.071917091983,122.073600504927,1.13800740571849,1.82797620175566,1.1270773567308,2.64746726198909,4.07300223052014,4.83937157243198,5.75452487830741,8.70899873079653,12.2459007716272,9.62497878590044,1.77871576252289,2.00214126859313,2.94838492669805,3.37293168577281,3.65148218499305,4.10001171579109,8.65727896056827,7.19240343627027,3.72911021582581,3.56929837144506,7.18841032636773,5.20997326735905,5.92871578917665,5.55673531483646,3.22915344339442,2.8946611281802,7.39012760666419,0.37898282354097,0.488894929326078,0.678980343100753,2.11221223459652,2.01007508930179,4.76087281772027,5.65887578787617,4.41378403497335,3.32197034473162,1.91345722388985,6.22680595919804,5.52591941970866,8.96824163205372,0,0,7.37646409528554,5.79467167239938,0.160550589987792,0,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,0,2.6968616189571,0.712262414669021,1.30309567482861,3.79431282836832,22.5666735177937,11.8962511715941,15.7208249621671,23.5756349694873,16.832207894204,18.1386737286917,21.4495483329624,13.8142817201452,16.0423820273125,21.1744627816997,27.4088382294997,13.4076206222643,1.02131881726136,0.36012218806262,0.646793418913773,1.50035924522115,1.59606210278046,0.891844088010353,1.15184314421485,0.304464949114599,9.38686832254841,13.5572525352845,16.0985730580122,26.5466867235783,12.2712964288888,14.2338502830448,22.2032559845834,38.4089705403443,76.076498360391,0,0,1.23832120777933,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,32.4588010125139,0.949007980743406,4.47302827679067,9.18045396985311,10.0362382086945,18.7791804821713,18.3415511083356,19.0102948168273,26.9608620243551,78.0282139216593,32.9309835936071,0,2.69129782879162,2.81279433777066,3.11121901350476,2.0665571756437,2.53434188236167,1.99507305697782,2.47388331203505,3.67007705489988,0,0.288030006257865,1.26404448251271,2.22997736819181,2.05421914329655,0.649604114888975,0.537080087002444,0.596044064343795,0.240390899039938,0.590758108698309,1.21159739937777,0.685861259894999,0.403304740547362,1.36441033035653,1.25075394132428,1.40252282617883,34.0095575422817,7.32553646134413,5.20340368334959,10.0730769818447,12.3641340180602,8.25802891985201,3.84618410961257,30.6546782083064,14.5455910170255,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,1.70174701947806,2.09613162627982,4.77993121970037,6.66740183404846,4.32673620201678,2.88827288632634,2.52697211763797,5.0695859978048,3.01802146217722,3.55837728385553,4.92993673517493,4.7671439233159,3.81034953026459,3.47652977834566,6.94473193669338,4.53294490883637,4.41596760403192,4.11443102862498,5.32427418478012,5.00715998889374,6.1045494985578,3.76437521661322,3.63842813934209,4.39027134894654,3.15683653725411,3.39510284614654,4.48913817326191,4.38949567059444,4.23569274214923,2.86461730218783,4.95797891795091,7.33045121728337,3.2475375131933,7.48581147025307,6.44613162144895,2.86932498103265,4.63241980150983,0.695603506861264
|phase1_expression=3.68342348341026,188.446720125255,195.194673698111,238.644262721089,271.986381360867,88.6402555694778,77.5593966777145,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,76.6363705180418,60.7934594828001,162.507645844551,130.090122840041,115.277109486951,114.964168771106,141.640932925081,79.8229838359097,0,0,0,67.302427402047,57.1847180033214,67.1717182103194,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0,0,0.659058548203415,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.453429360640713,41.7404863730416,3.44169550792555,18.3592260101093,0,0,4.03224198387602,8.56710962803686,0.511290967734173,0,0.35333957451034,12.9575946194546,3.84979432242953,0,0,22.0820861831438,19.2553497761075,21.7375511356357,28.6601538094841,1.03575153458869,0.742210695324124,0.867426633830679,2.43572382649713,5.07354093963329,2.86373017049983,2.93971767839262,1.13099932196708,41.2815596116404,7.37456720291549,0,0.485300549842228,0.441683036920787,0.484875253135222,76.4206220994301,0.292780797011547,0.209446706813455,87.8772269917554,0,0,0,0,0,0,0.173824320192276,0,0,0,0.916554274652847,3.11017426525233,12.1306924048164,8.41767423545896,0.520481771850815,0.229902104433473,0.360124259610698,2.10986744970001,0.748401490664606,1.2811372028485,1.49922759295566,6.46758426847539,0.646703978798527,0.378212160335639,0.879755620819744,1.09597866213787,1.39023624612799,8.70630416305416,9.05441400194951,2.7864797354589,0,0,0,0.414251545071004,2.34526059981096,1.44049649168812,1.18372367792605,3.93528463494808,4.16521204795921,6.97601834251224,6.43856163359086,6.889155199663,4.44311594766397,6.7308660272429,5.91802309684747,8.18719929581861,10.3188554186794,9.79706856950714,0.420579897128254,0,178.426142811251,80.9218733990446,1.06644125267617,3.94802342162745,10.0516619831233,18.3532007407242,22.4601824283319,29.1045207952215,77.3482370317554,37.5513616770745,44.2349967488474,51.9276392027404,45.6215963858741,77.2984691442631,100.071917091983,122.073600504927,1.13800740571849,1.82797620175566,1.1270773567308,2.64746726198909,4.07300223052014,4.83937157243198,5.75452487830741,8.70899873079653,12.2459007716272,9.62497878590044,1.77871576252289,2.00214126859313,2.94838492669805,3.37293168577281,3.65148218499305,4.10001171579109,8.65727896056827,7.19240343627027,3.72911021582581,3.56929837144506,7.18841032636773,5.20997326735905,5.92871578917665,5.55673531483646,3.22915344339442,2.8946611281802,7.39012760666419,0.37898282354097,0.488894929326078,0.678980343100753,2.11221223459652,2.01007508930179,4.76087281772027,5.65887578787617,4.41378403497335,3.32197034473162,1.91345722388985,6.22680595919804,5.52591941970866,8.96824163205372,0,0,7.37646409528554,5.79467167239938,0.160550589987792,0,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,0,2.6968616189571,0.712262414669021,1.30309567482861,3.79431282836832,22.5666735177937,11.8962511715941,15.7208249621671,23.5756349694873,16.832207894204,18.1386737286917,21.4495483329624,13.8142817201452,16.0423820273125,21.1744627816997,27.4088382294997,13.4076206222643,1.02131881726136,0.36012218806262,0.646793418913773,1.50035924522115,1.59606210278046,0.891844088010353,1.15184314421485,0.304464949114599,9.38686832254841,13.5572525352845,16.0985730580122,26.5466867235783,12.2712964288888,14.2338502830448,22.2032559845834,38.4089705403443,76.076498360391,0,0,1.23832120777933,0.740778109478847,0.188368457004691,0.136694227721025,0,0,0,0,32.4588010125139,0.949007980743406,4.47302827679067,9.18045396985311,10.0362382086945,18.7791804821713,18.3415511083356,19.0102948168273,26.9608620243551,78.0282139216593,32.9309835936071,0,2.69129782879162,2.81279433777066,3.11121901350476,2.0665571756437,2.53434188236167,1.99507305697782,2.47388331203505,3.67007705489988,0,0.288030006257865,1.26404448251271,2.22997736819181,2.05421914329655,0.649604114888975,0.537080087002444,0.596044064343795,0.240390899039938,0.590758108698309,1.21159739937777,0.685861259894999,0.403304740547362,1.36441033035653,1.25075394132428,1.40252282617883,34.0095575422817,7.32553646134413,5.20340368334959,10.0730769818447,12.3641340180602,8.25802891985201,3.84618410961257,30.6546782083064,14.5455910170255,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,1.70174701947806,2.09613162627982,4.77993121970037,6.66740183404846,4.32673620201678,2.88827288632634,2.52697211763797,5.0695859978048,3.01802146217722,3.55837728385553,4.92993673517493,4.7671439233159,3.81034953026459,3.47652977834566,6.94473193669338,4.53294490883637,4.41596760403192,4.11443102862498,5.32427418478012,5.00715998889374,6.1045494985578,3.76437521661322,3.63842813934209,4.39027134894654,3.15683653725411,3.39510284614654,4.48913817326191,4.38949567059444,4.23569274214923,2.86461730218783,4.95797891795091,7.33045121728337,3.2475375131933,7.48581147025307,6.44613162144895,2.86932498103265,4.63241980150983,0.695603506861264
|short_description=p1@Chmp4c
|short_description=p1@Chmp4c
}}
}}

Latest revision as of 05:38, 27 September 2015

Short description:p1@Chmp4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chmp4c_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -9bp_to_NM_025519, uc008opu.1, uc012cni.1_5end
EntrezGene:Chmp4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chmp4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5188.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6195.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I3238.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I4271.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I788.64
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I877.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D176.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D260.79
GP2+ M cell, pool1.CNhs13228.11845-124H9162.51
GP2+ M cell, pool2.CNhs13231.11846-124I1130.09
GP2+ M cell, pool3.CNhs13240.11847-124I2115.28
Ileum epithelium, pool1.CNhs13199.10252-104B9114.96
Ileum epithelium, pool2.CNhs13232.10253-104C1141.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C879.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F567.30
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F657.18
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F767.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.66
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A841.28
aorta, adult.CNhs10498.46-23H17.37
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H476.42
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H787.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G15.92
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3178.43
intestine, adult.CNhs10496.178-9A380.92
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D810.05
intestine, embryo E16.CNhs10585.463-22H418.35
intestine, embryo E17.CNhs10582.482-18D322.46
intestine, embryo E18.CNhs10526.1289-20F729.10
intestine, neonate N00.CNhs11126.644-26D177.35
intestine, neonate N01.CNhs11192.1322-23E937.55
intestine, neonate N06.CNhs11102.688-20B844.23
intestine, neonate N07.CNhs11095.720-20F251.93
intestine, neonate N10.CNhs11098.755-23A545.62
intestine, neonate N20.CNhs11187.827-18D177.30
intestine, neonate N25.CNhs11121.1352-25E3100.07
intestine, neonate N30.CNhs11131.1384-42G1122.07
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.84
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F312.25
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F411.90
pancreas, embryo E15.CNhs11042.1556-45F215.72
pancreas, embryo E16.CNhs11003.460-26E523.58
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B621.17
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G313.56
prostate, adult.CNhs10470.859-1F816.10
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G412.27
skin, neonate N03.CNhs11215.662-22H314.23
skin, neonate N06.CNhs11097.693-20I522.20
skin, neonate N10.CNhs11108.762-6C438.41
small intestine, neonate N16.CNhs11114.790-21I176.08
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H632.46
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D49.18
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C618.78
stomach, neonate N03.CNhs11193.1340-24B818.34
stomach, neonate N07.CNhs11210.718-18A919.01
stomach, neonate N25.CNhs11104.1355-25E426.96
stomach, neonate N30.CNhs11134.1386-42I178.03
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B434.01
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.07
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D530.65
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.07e-0825
intestinal epithelial cell1.57e-079
epithelial cell of alimentary canal1.57e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:10366927..10366963,%2B&oldid=4295170"