FFCP PHASE1:Mm9::chr13:23802654..23802698,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15216 | |EntrezGene=15216 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2705 | |MCL_coexpression_id=2705 | ||
|TSSclassifier=NA | |||
|UniProt=P70387 | |UniProt=P70387 | ||
|association_with_transcript=0bp_to_NM_010424,uc007pup.1_5end | |association_with_transcript=0bp_to_NM_010424,uc007pup.1_5end | ||
|cluster_id=chr13:23802654..23802698,- | |||
|description=CAGE_peak_1_at_Hfe_5end | |description=CAGE_peak_1_at_Hfe_5end | ||
|id=chr13:23802654..23802698,- | |id=chr13:23802654..23802698,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.55e-14!193;UBERON:0004120!5.55e-14!193;UBERON:0006603!5.55e-14!193;UBERON:0009569!1.18e-13!66;UBERON:0003914!2.78e-13!47;UBERON:0005172!2.79e-12!49;UBERON:0005173!2.79e-12!49;UBERON:0002417!2.79e-12!49;UBERON:0000916!2.79e-12!49;UBERON:0005177!4.47e-11!85;UBERON:0000466!5.10e-11!79;UBERON:0002365!1.70e-10!25;UBERON:0002330!1.70e-10!25;UBERON:0005256!2.19e-10!47;UBERON:0002100!2.61e-10!98;UBERON:0002107!2.83e-10!22;UBERON:0007499!2.83e-10!22;UBERON:0006925!2.83e-10!22;UBERON:0009497!2.83e-10!22;UBERON:0000015!2.83e-10!22;UBERON:0002423!2.83e-10!22;UBERON:0006235!2.83e-10!22;UBERON:0008835!2.83e-10!22;UBERON:0003894!2.83e-10!22;UBERON:0004161!2.83e-10!22;UBERON:0008836!2.83e-10!22;UBERON:0009854!1.59e-09!23;UBERON:0009856!1.59e-09!23 | |ontology_enrichment_uberon=UBERON:0000926!5.55e-14!193;UBERON:0004120!5.55e-14!193;UBERON:0006603!5.55e-14!193;UBERON:0009569!1.18e-13!66;UBERON:0003914!2.78e-13!47;UBERON:0005172!2.79e-12!49;UBERON:0005173!2.79e-12!49;UBERON:0002417!2.79e-12!49;UBERON:0000916!2.79e-12!49;UBERON:0005177!4.47e-11!85;UBERON:0000466!5.10e-11!79;UBERON:0002365!1.70e-10!25;UBERON:0002330!1.70e-10!25;UBERON:0005256!2.19e-10!47;UBERON:0002100!2.61e-10!98;UBERON:0002107!2.83e-10!22;UBERON:0007499!2.83e-10!22;UBERON:0006925!2.83e-10!22;UBERON:0009497!2.83e-10!22;UBERON:0000015!2.83e-10!22;UBERON:0002423!2.83e-10!22;UBERON:0006235!2.83e-10!22;UBERON:0008835!2.83e-10!22;UBERON:0003894!2.83e-10!22;UBERON:0004161!2.83e-10!22;UBERON:0008836!2.83e-10!22;UBERON:0009854!1.59e-09!23;UBERON:0009856!1.59e-09!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.35e-13,66;UBERON:0003914,2.53e-13,47;UBERON:0005177,9.32e-13,79;UBERON:0005172,2.77e-12,49;UBERON:0005173,2.77e-12,49;UBERON:0002417,2.77e-12,49;UBERON:0000916,2.77e-12,49;UBERON:0002100,3.64e-12,90;UBERON:0005256,4.35e-11,45;UBERON:0002365,1.59e-10,25;UBERON:0002330,1.59e-10,25;UBERON:0002107,2.64e-10,22;UBERON:0007499,2.64e-10,22;UBERON:0006925,2.64e-10,22;UBERON:0009497,2.64e-10,22;UBERON:0000015,2.64e-10,22;UBERON:0002423,2.64e-10,22;UBERON:0006235,2.64e-10,22;UBERON:0008835,2.64e-10,22;UBERON:0003894,2.64e-10,22;UBERON:0004161,2.64e-10,22;UBERON:0008836,2.64e-10,22;UBERON:0003104,5.66e-10,61;UBERON:0009142,5.66e-10,61;UBERON:0009854,1.49e-09,23;UBERON:0009856,1.49e-09,23 | |||
|phase1_expression=4.00372117761985,1.74487703819681,0.909998478779072,0.60492842261366,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0.174840804837995,6.99530499812892,4.45445588257617,6.99561878128147,2.5236973228659,1.50825876966313,2.54633791078818,4.33720779770456,0.0992909512008853,0.522399578277871,2.55987876469451,3.21172993494038,1.72269589234506,1.29228598847722,2.58565479223067,2.85035129184561,2.01624103807945,4.8780712344167,0,0,0,6.35473563452804,2.65975432573588,4.90006455029686,1.67412652294763,5.4693474116666,1.57057123192139,1.17646297606203,0,1.45653105909346,7.1761186246079,7.29913904780505,1.10128051297009,4.69434806608824,10.6832326626419,8.12838876117546,7.77719596297134,5.31948402176378,7.18762821824858,0,0,0,4.3734104126111,3.72493471920384,3.09403255366465,0.404632921719196,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,73.341826958434,82.0759080930589,93.7833751728852,20.0732074047331,13.831858991576,0.725827286159344,0.405017814995072,0.630974884054146,1.71390590642282,2.42955395046775,0.244981598429908,0,0.919218786610021,0,0.893811366596314,2.4577045320999,0.791317726381163,0.823388792421687,0.52091337055676,2.79182999001381,2.25105044012672,1.98637722109853,1.76777151284201,1.99320353118744,0.559198337475902,0.227178579999552,1.13357340160178,42.6100798391466,45.6024654800135,20.3991400112325,25.9057531986152,23.3919510281161,18.3691023709908,7.44355426698285,2.55645483867087,2.07828803682295,1.7666978725517,1.54927761754349,3.84979432242953,5.09610479413291,0,1.5154372870785,0.760079596425296,2.52762222507392,7.9928715803342,3.88406825470758,17.3677302705845,3.12273588179045,4.87144765299426,7.61031140944993,8.89263579260473,11.9940481278419,13.1949920896159,9.64060374164058,8.24216334443496,6.19227386364912,4.04417124868523,5.30019644304944,5.81850303762267,1.86391761218122,4.68449275218475,2.72280718857492,5.10914110417183,2.03685711660064,2.39961092397363,2.41433431438823,1.3481157546434,2.74500361691176,0.879580464790051,1.39059456153821,2.04572365864264,1.24672826735736,3.24482526135515,9.26738211037878,7.2156042953854,4.80173241023982,8.41767423545896,1.30120442962704,1.14951052216736,1.44049703844279,2.41127708537144,2.4493139694478,3.07472928683639,1.78033276663485,7.50239775143145,0.862271971731369,0.378212160335639,1.75951124163949,2.41115305670332,2.50242524303038,4.87553033131033,4.32142486456681,1.39323986772945,4.21327912387941,4.88961023517959,6.53576048609863,2.48550927042602,3.28336483973535,5.04173772090842,4.97163944728941,4.72234156193769,5.707883176833,6.51095045301142,4.82892122519315,10.6256461554124,7.73431294593358,8.86504306027114,14.4302480991623,17.1053985287639,17.344459107993,18.2520729514106,4.6263788684108,2.6755199218614,2.31293148088659,4.49565963328025,0.639864751605702,1.85789337488351,2.70621668776396,3.22693639397348,3.33567065767305,3.42406127002606,4.74529061544512,8.72904460037258,8.29406189040889,7.75930240960488,6.23885078781184,5.39291645192533,5.40345124686736,5.57595565112228,0.948339504765408,1.37098215131675,0,3.25842124552503,2.52138233317913,4.41855665309007,10.0546094027569,8.56138858281692,7.53593893638599,11.9695249004147,21.6410417773619,1.50160595144485,3.34150291692445,3.59779379815766,5.88294352026658,11.0941493486112,13.2405442926338,9.78166867332756,15.7271169971784,14.5517548989683,17.2521847832825,25.3055844414582,22.7787501373629,29.8043075977592,22.9628689308048,27.4992807177119,22.1703828199926,1.70542270593436,2.11854469374634,2.20668611507745,3.28566347603903,5.69521275302174,8.09348379012447,9.36641509717434,8.82756806994669,12.4020226203314,11.4807433433391,22.6131374307718,18.4772930596508,19.9615700842486,28.6503439484617,18.4927932498361,4.42587845717133,5.24279817978992,3.85321415970701,3.28192722458169,0.983609672260053,12.3710754330143,0.315508219416257,1.56175497718655,1.50796378412959,0.238968797952552,0.668396022247182,0.283076530788832,2.42886421004937,0.292255857911312,1.58115111178609,2.57057053137446,5.39372323791421,4.98583690268315,5.86393053672874,5.27904393512113,2.65490276679926,1.45668381692989,1.51161778482376,1.69744571780308,4.13422650033082,4.61152721915891,4.9101375701962,8.36127577798263,7.12994756769443,4.10847785316561,5.27093042874994,2.06271086496374,12.2558258071364,1.98067203434441,1.81102157295856,2.57204442037911,2.6601035046341,4.45922044005176,3.9491764944509,10.0473433207818,0.938686832254841,3.1774810629573,5.73373834942901,5.7710188529518,6.13564821444441,4.46315644468353,4.8942661041286,4.10352249362653,6.41257840585672,5.7481843623258,9.7396402054776,7.63631411463923,7.40778109478847,6.02779062415011,4.10082683163076,7.32090154260872,4.07948231985253,2.09927178485487,2.48759952847963,10.5013767981662,1.58167996790568,1.42323626988794,2.80813886136683,2.71814784818809,4.58561383866973,4.18079473792944,10.083721598491,5.49687478166462,8.29535829067474,8.07741107013003,0,1.49516546043979,2.31641886639937,2.33341426012857,4.1331143512874,5.23763989021412,5.16371850041317,5.59878854828985,8.07416952077974,5.55643477899814,5.18454011264158,1.89606672376907,2.02725215290164,1.02710957164827,2.33857481360031,1.9692936523423,0.596044064343795,3.24527713703916,1.62458479892035,1.9183625490148,1.37172251979,1.10908803650525,1.55932609183604,1.82802499116626,1.40252282617883,9.52267611183888,0.221985953374065,0.0897138566094757,0.167884616364078,7.92077335531981,8.25802891985201,5.31139710375069,4.07299920250225,5.01572104035363,0.564751842617067,1.84130094602871,1.71868654031819,1.20297227640581,1.37016503954128,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,1.03552062350364,0.62272408550506,1.99512436700516,1.53660245178721,1.70174701947806,1.04806581313991,1.47074806760011,2.44471400581777,3.09052585858341,3.53011130550997,2.77966932940177,2.78827229879264,3.39527414494937,2.52832070168682,3.45735822986294,4.307660171671,7.1444053692461,2.54945517078682,4.82273051159263,3.29668720642645,2.20798380201596,4.11443102862498,4.08194354166476,3.57654284920981,5.66851024866081,3.48204707536723,4.65380343404221,3.10977553883713,2.89376682581627,3.25929873230068,4.48913817326191,3.32178050747688,3.34915240076916,3.6830793885272,4.02835787083512,4.62975866354739,4.24677982494508,4.67863216890817,7.73535794573874,7.46024495068489,8.6030653456611,7.88350641109433 | |phase1_expression=4.00372117761985,1.74487703819681,0.909998478779072,0.60492842261366,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0.174840804837995,6.99530499812892,4.45445588257617,6.99561878128147,2.5236973228659,1.50825876966313,2.54633791078818,4.33720779770456,0.0992909512008853,0.522399578277871,2.55987876469451,3.21172993494038,1.72269589234506,1.29228598847722,2.58565479223067,2.85035129184561,2.01624103807945,4.8780712344167,0,0,0,6.35473563452804,2.65975432573588,4.90006455029686,1.67412652294763,5.4693474116666,1.57057123192139,1.17646297606203,0,1.45653105909346,7.1761186246079,7.29913904780505,1.10128051297009,4.69434806608824,10.6832326626419,8.12838876117546,7.77719596297134,5.31948402176378,7.18762821824858,0,0,0,4.3734104126111,3.72493471920384,3.09403255366465,0.404632921719196,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,73.341826958434,82.0759080930589,93.7833751728852,20.0732074047331,13.831858991576,0.725827286159344,0.405017814995072,0.630974884054146,1.71390590642282,2.42955395046775,0.244981598429908,0,0.919218786610021,0,0.893811366596314,2.4577045320999,0.791317726381163,0.823388792421687,0.52091337055676,2.79182999001381,2.25105044012672,1.98637722109853,1.76777151284201,1.99320353118744,0.559198337475902,0.227178579999552,1.13357340160178,42.6100798391466,45.6024654800135,20.3991400112325,25.9057531986152,23.3919510281161,18.3691023709908,7.44355426698285,2.55645483867087,2.07828803682295,1.7666978725517,1.54927761754349,3.84979432242953,5.09610479413291,0,1.5154372870785,0.760079596425296,2.52762222507392,7.9928715803342,3.88406825470758,17.3677302705845,3.12273588179045,4.87144765299426,7.61031140944993,8.89263579260473,11.9940481278419,13.1949920896159,9.64060374164058,8.24216334443496,6.19227386364912,4.04417124868523,5.30019644304944,5.81850303762267,1.86391761218122,4.68449275218475,2.72280718857492,5.10914110417183,2.03685711660064,2.39961092397363,2.41433431438823,1.3481157546434,2.74500361691176,0.879580464790051,1.39059456153821,2.04572365864264,1.24672826735736,3.24482526135515,9.26738211037878,7.2156042953854,4.80173241023982,8.41767423545896,1.30120442962704,1.14951052216736,1.44049703844279,2.41127708537144,2.4493139694478,3.07472928683639,1.78033276663485,7.50239775143145,0.862271971731369,0.378212160335639,1.75951124163949,2.41115305670332,2.50242524303038,4.87553033131033,4.32142486456681,1.39323986772945,4.21327912387941,4.88961023517959,6.53576048609863,2.48550927042602,3.28336483973535,5.04173772090842,4.97163944728941,4.72234156193769,5.707883176833,6.51095045301142,4.82892122519315,10.6256461554124,7.73431294593358,8.86504306027114,14.4302480991623,17.1053985287639,17.344459107993,18.2520729514106,4.6263788684108,2.6755199218614,2.31293148088659,4.49565963328025,0.639864751605702,1.85789337488351,2.70621668776396,3.22693639397348,3.33567065767305,3.42406127002606,4.74529061544512,8.72904460037258,8.29406189040889,7.75930240960488,6.23885078781184,5.39291645192533,5.40345124686736,5.57595565112228,0.948339504765408,1.37098215131675,0,3.25842124552503,2.52138233317913,4.41855665309007,10.0546094027569,8.56138858281692,7.53593893638599,11.9695249004147,21.6410417773619,1.50160595144485,3.34150291692445,3.59779379815766,5.88294352026658,11.0941493486112,13.2405442926338,9.78166867332756,15.7271169971784,14.5517548989683,17.2521847832825,25.3055844414582,22.7787501373629,29.8043075977592,22.9628689308048,27.4992807177119,22.1703828199926,1.70542270593436,2.11854469374634,2.20668611507745,3.28566347603903,5.69521275302174,8.09348379012447,9.36641509717434,8.82756806994669,12.4020226203314,11.4807433433391,22.6131374307718,18.4772930596508,19.9615700842486,28.6503439484617,18.4927932498361,4.42587845717133,5.24279817978992,3.85321415970701,3.28192722458169,0.983609672260053,12.3710754330143,0.315508219416257,1.56175497718655,1.50796378412959,0.238968797952552,0.668396022247182,0.283076530788832,2.42886421004937,0.292255857911312,1.58115111178609,2.57057053137446,5.39372323791421,4.98583690268315,5.86393053672874,5.27904393512113,2.65490276679926,1.45668381692989,1.51161778482376,1.69744571780308,4.13422650033082,4.61152721915891,4.9101375701962,8.36127577798263,7.12994756769443,4.10847785316561,5.27093042874994,2.06271086496374,12.2558258071364,1.98067203434441,1.81102157295856,2.57204442037911,2.6601035046341,4.45922044005176,3.9491764944509,10.0473433207818,0.938686832254841,3.1774810629573,5.73373834942901,5.7710188529518,6.13564821444441,4.46315644468353,4.8942661041286,4.10352249362653,6.41257840585672,5.7481843623258,9.7396402054776,7.63631411463923,7.40778109478847,6.02779062415011,4.10082683163076,7.32090154260872,4.07948231985253,2.09927178485487,2.48759952847963,10.5013767981662,1.58167996790568,1.42323626988794,2.80813886136683,2.71814784818809,4.58561383866973,4.18079473792944,10.083721598491,5.49687478166462,8.29535829067474,8.07741107013003,0,1.49516546043979,2.31641886639937,2.33341426012857,4.1331143512874,5.23763989021412,5.16371850041317,5.59878854828985,8.07416952077974,5.55643477899814,5.18454011264158,1.89606672376907,2.02725215290164,1.02710957164827,2.33857481360031,1.9692936523423,0.596044064343795,3.24527713703916,1.62458479892035,1.9183625490148,1.37172251979,1.10908803650525,1.55932609183604,1.82802499116626,1.40252282617883,9.52267611183888,0.221985953374065,0.0897138566094757,0.167884616364078,7.92077335531981,8.25802891985201,5.31139710375069,4.07299920250225,5.01572104035363,0.564751842617067,1.84130094602871,1.71868654031819,1.20297227640581,1.37016503954128,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,1.03552062350364,0.62272408550506,1.99512436700516,1.53660245178721,1.70174701947806,1.04806581313991,1.47074806760011,2.44471400581777,3.09052585858341,3.53011130550997,2.77966932940177,2.78827229879264,3.39527414494937,2.52832070168682,3.45735822986294,4.307660171671,7.1444053692461,2.54945517078682,4.82273051159263,3.29668720642645,2.20798380201596,4.11443102862498,4.08194354166476,3.57654284920981,5.66851024866081,3.48204707536723,4.65380343404221,3.10977553883713,2.89376682581627,3.25929873230068,4.48913817326191,3.32178050747688,3.34915240076916,3.6830793885272,4.02835787083512,4.62975866354739,4.24677982494508,4.67863216890817,7.73535794573874,7.46024495068489,8.6030653456611,7.88350641109433 | ||
|short_description=p1@Hfe | |short_description=p1@Hfe | ||
}} | }} |
Latest revision as of 07:14, 27 September 2015
Short description: | p1@Hfe |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hfe_5end |
Coexpression cluster: | MCL_coexpression_mm9:2705 |
Association with transcript: | 0bp_to_NM_010424, uc007pup.1_5end |
EntrezGene: | Hfe |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.35e-13 | 66 |
epithelial tube | 2.53e-13 | 47 |
trunk region element | 9.32e-13 | 79 |
abdomen element | 2.77e-12 | 49 |
abdominal segment element | 2.77e-12 | 49 |
abdominal segment of trunk | 2.77e-12 | 49 |
abdomen | 2.77e-12 | 49 |
trunk | 3.64e-12 | 90 |
trunk mesenchyme | 4.35e-11 | 45 |
exocrine gland | 1.59e-10 | 25 |
exocrine system | 1.59e-10 | 25 |
liver | 2.64e-10 | 22 |
epithelial sac | 2.64e-10 | 22 |
digestive gland | 2.64e-10 | 22 |
epithelium of foregut-midgut junction | 2.64e-10 | 22 |
anatomical boundary | 2.64e-10 | 22 |
hepatobiliary system | 2.64e-10 | 22 |
foregut-midgut junction | 2.64e-10 | 22 |
hepatic diverticulum | 2.64e-10 | 22 |
liver primordium | 2.64e-10 | 22 |
septum transversum | 2.64e-10 | 22 |
liver bud | 2.64e-10 | 22 |
mesenchyme | 5.66e-10 | 61 |
entire embryonic mesenchyme | 5.66e-10 | 61 |
digestive tract diverticulum | 1.49e-09 | 23 |
sac | 1.49e-09 | 23 |