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FFCP PHASE1:Mm9::chr13:23802654..23802698,-: Difference between revisions

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{{FFCP|EntrezGene=15216|HGNC=|MCL_coexpression_id=2705|UniProt=P70387|association_with_transcript=0bp_to_NM_010424,uc007pup.1_5end|description=CAGE_peak_1_at_Hfe_5end|id=chr13:23802654..23802698,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!5.55e-14!193;UBERON:0004120!5.55e-14!193;UBERON:0006603!5.55e-14!193;UBERON:0009569!1.18e-13!66;UBERON:0003914!2.78e-13!47;UBERON:0005172!2.79e-12!49;UBERON:0005173!2.79e-12!49;UBERON:0002417!2.79e-12!49;UBERON:0000916!2.79e-12!49;UBERON:0005177!4.47e-11!85;UBERON:0000466!5.10e-11!79;UBERON:0002365!1.70e-10!25;UBERON:0002330!1.70e-10!25;UBERON:0005256!2.19e-10!47;UBERON:0002100!2.61e-10!98;UBERON:0002107!2.83e-10!22;UBERON:0007499!2.83e-10!22;UBERON:0006925!2.83e-10!22;UBERON:0009497!2.83e-10!22;UBERON:0000015!2.83e-10!22;UBERON:0002423!2.83e-10!22;UBERON:0006235!2.83e-10!22;UBERON:0008835!2.83e-10!22;UBERON:0003894!2.83e-10!22;UBERON:0004161!2.83e-10!22;UBERON:0008836!2.83e-10!22;UBERON:0009854!1.59e-09!23;UBERON:0009856!1.59e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.35e-13,66;UBERON:0003914,2.53e-13,47;UBERON:0005177,9.32e-13,79;UBERON:0005172,2.77e-12,49;UBERON:0005173,2.77e-12,49;UBERON:0002417,2.77e-12,49;UBERON:0000916,2.77e-12,49;UBERON:0002100,3.64e-12,90;UBERON:0005256,4.35e-11,45;UBERON:0002365,1.59e-10,25;UBERON:0002330,1.59e-10,25;UBERON:0002107,2.64e-10,22;UBERON:0007499,2.64e-10,22;UBERON:0006925,2.64e-10,22;UBERON:0009497,2.64e-10,22;UBERON:0000015,2.64e-10,22;UBERON:0002423,2.64e-10,22;UBERON:0006235,2.64e-10,22;UBERON:0008835,2.64e-10,22;UBERON:0003894,2.64e-10,22;UBERON:0004161,2.64e-10,22;UBERON:0008836,2.64e-10,22;UBERON:0003104,5.66e-10,61;UBERON:0009142,5.66e-10,61;UBERON:0009854,1.49e-09,23;UBERON:0009856,1.49e-09,23|phase1_expression=4.00372117761985,1.74487703819681,0.909998478779072,0.60492842261366,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0.174840804837995,6.99530499812892,4.45445588257617,6.99561878128147,2.5236973228659,1.50825876966313,2.54633791078818,4.33720779770456,0.0992909512008853,0.522399578277871,2.55987876469451,3.21172993494038,1.72269589234506,1.29228598847722,2.58565479223067,2.85035129184561,2.01624103807945,4.8780712344167,0,0,0,6.35473563452804,2.65975432573588,4.90006455029686,1.67412652294763,5.4693474116666,1.57057123192139,1.17646297606203,0,1.45653105909346,7.1761186246079,7.29913904780505,1.10128051297009,4.69434806608824,10.6832326626419,8.12838876117546,7.77719596297134,5.31948402176378,7.18762821824858,0,0,0,4.3734104126111,3.72493471920384,3.09403255366465,0.404632921719196,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,73.341826958434,82.0759080930589,93.7833751728852,20.0732074047331,13.831858991576,0.725827286159344,0.405017814995072,0.630974884054146,1.71390590642282,2.42955395046775,0.244981598429908,0,0.919218786610021,0,0.893811366596314,2.4577045320999,0.791317726381163,0.823388792421687,0.52091337055676,2.79182999001381,2.25105044012672,1.98637722109853,1.76777151284201,1.99320353118744,0.559198337475902,0.227178579999552,1.13357340160178,42.6100798391466,45.6024654800135,20.3991400112325,25.9057531986152,23.3919510281161,18.3691023709908,7.44355426698285,2.55645483867087,2.07828803682295,1.7666978725517,1.54927761754349,3.84979432242953,5.09610479413291,0,1.5154372870785,0.760079596425296,2.52762222507392,7.9928715803342,3.88406825470758,17.3677302705845,3.12273588179045,4.87144765299426,7.61031140944993,8.89263579260473,11.9940481278419,13.1949920896159,9.64060374164058,8.24216334443496,6.19227386364912,4.04417124868523,5.30019644304944,5.81850303762267,1.86391761218122,4.68449275218475,2.72280718857492,5.10914110417183,2.03685711660064,2.39961092397363,2.41433431438823,1.3481157546434,2.74500361691176,0.879580464790051,1.39059456153821,2.04572365864264,1.24672826735736,3.24482526135515,9.26738211037878,7.2156042953854,4.80173241023982,8.41767423545896,1.30120442962704,1.14951052216736,1.44049703844279,2.41127708537144,2.4493139694478,3.07472928683639,1.78033276663485,7.50239775143145,0.862271971731369,0.378212160335639,1.75951124163949,2.41115305670332,2.50242524303038,4.87553033131033,4.32142486456681,1.39323986772945,4.21327912387941,4.88961023517959,6.53576048609863,2.48550927042602,3.28336483973535,5.04173772090842,4.97163944728941,4.72234156193769,5.707883176833,6.51095045301142,4.82892122519315,10.6256461554124,7.73431294593358,8.86504306027114,14.4302480991623,17.1053985287639,17.344459107993,18.2520729514106,4.6263788684108,2.6755199218614,2.31293148088659,4.49565963328025,0.639864751605702,1.85789337488351,2.70621668776396,3.22693639397348,3.33567065767305,3.42406127002606,4.74529061544512,8.72904460037258,8.29406189040889,7.75930240960488,6.23885078781184,5.39291645192533,5.40345124686736,5.57595565112228,0.948339504765408,1.37098215131675,0,3.25842124552503,2.52138233317913,4.41855665309007,10.0546094027569,8.5613885828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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15216
|HGNC=
|MCL_coexpression_id=2705
|TSSclassifier=NA
|UniProt=P70387
|association_with_transcript=0bp_to_NM_010424,uc007pup.1_5end
|cluster_id=chr13:23802654..23802698,-
|description=CAGE_peak_1_at_Hfe_5end
|id=chr13:23802654..23802698,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!5.55e-14!193;UBERON:0004120!5.55e-14!193;UBERON:0006603!5.55e-14!193;UBERON:0009569!1.18e-13!66;UBERON:0003914!2.78e-13!47;UBERON:0005172!2.79e-12!49;UBERON:0005173!2.79e-12!49;UBERON:0002417!2.79e-12!49;UBERON:0000916!2.79e-12!49;UBERON:0005177!4.47e-11!85;UBERON:0000466!5.10e-11!79;UBERON:0002365!1.70e-10!25;UBERON:0002330!1.70e-10!25;UBERON:0005256!2.19e-10!47;UBERON:0002100!2.61e-10!98;UBERON:0002107!2.83e-10!22;UBERON:0007499!2.83e-10!22;UBERON:0006925!2.83e-10!22;UBERON:0009497!2.83e-10!22;UBERON:0000015!2.83e-10!22;UBERON:0002423!2.83e-10!22;UBERON:0006235!2.83e-10!22;UBERON:0008835!2.83e-10!22;UBERON:0003894!2.83e-10!22;UBERON:0004161!2.83e-10!22;UBERON:0008836!2.83e-10!22;UBERON:0009854!1.59e-09!23;UBERON:0009856!1.59e-09!23
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.35e-13,66;UBERON:0003914,2.53e-13,47;UBERON:0005177,9.32e-13,79;UBERON:0005172,2.77e-12,49;UBERON:0005173,2.77e-12,49;UBERON:0002417,2.77e-12,49;UBERON:0000916,2.77e-12,49;UBERON:0002100,3.64e-12,90;UBERON:0005256,4.35e-11,45;UBERON:0002365,1.59e-10,25;UBERON:0002330,1.59e-10,25;UBERON:0002107,2.64e-10,22;UBERON:0007499,2.64e-10,22;UBERON:0006925,2.64e-10,22;UBERON:0009497,2.64e-10,22;UBERON:0000015,2.64e-10,22;UBERON:0002423,2.64e-10,22;UBERON:0006235,2.64e-10,22;UBERON:0008835,2.64e-10,22;UBERON:0003894,2.64e-10,22;UBERON:0004161,2.64e-10,22;UBERON:0008836,2.64e-10,22;UBERON:0003104,5.66e-10,61;UBERON:0009142,5.66e-10,61;UBERON:0009854,1.49e-09,23;UBERON:0009856,1.49e-09,23
|phase1_expression=4.00372117761985,1.74487703819681,0.909998478779072,0.60492842261366,0,1.84667199103079,1.86890112476421,0,0,0,0,0,0,0.174840804837995,6.99530499812892,4.45445588257617,6.99561878128147,2.5236973228659,1.50825876966313,2.54633791078818,4.33720779770456,0.0992909512008853,0.522399578277871,2.55987876469451,3.21172993494038,1.72269589234506,1.29228598847722,2.58565479223067,2.85035129184561,2.01624103807945,4.8780712344167,0,0,0,6.35473563452804,2.65975432573588,4.90006455029686,1.67412652294763,5.4693474116666,1.57057123192139,1.17646297606203,0,1.45653105909346,7.1761186246079,7.29913904780505,1.10128051297009,4.69434806608824,10.6832326626419,8.12838876117546,7.77719596297134,5.31948402176378,7.18762821824858,0,0,0,4.3734104126111,3.72493471920384,3.09403255366465,0.404632921719196,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,73.341826958434,82.0759080930589,93.7833751728852,20.0732074047331,13.831858991576,0.725827286159344,0.405017814995072,0.630974884054146,1.71390590642282,2.42955395046775,0.244981598429908,0,0.919218786610021,0,0.893811366596314,2.4577045320999,0.791317726381163,0.823388792421687,0.52091337055676,2.79182999001381,2.25105044012672,1.98637722109853,1.76777151284201,1.99320353118744,0.559198337475902,0.227178579999552,1.13357340160178,42.6100798391466,45.6024654800135,20.3991400112325,25.9057531986152,23.3919510281161,18.3691023709908,7.44355426698285,2.55645483867087,2.07828803682295,1.7666978725517,1.54927761754349,3.84979432242953,5.09610479413291,0,1.5154372870785,0.760079596425296,2.52762222507392,7.9928715803342,3.88406825470758,17.3677302705845,3.12273588179045,4.87144765299426,7.61031140944993,8.89263579260473,11.9940481278419,13.1949920896159,9.64060374164058,8.24216334443496,6.19227386364912,4.04417124868523,5.30019644304944,5.81850303762267,1.86391761218122,4.68449275218475,2.72280718857492,5.10914110417183,2.03685711660064,2.39961092397363,2.41433431438823,1.3481157546434,2.74500361691176,0.879580464790051,1.39059456153821,2.04572365864264,1.24672826735736,3.24482526135515,9.26738211037878,7.2156042953854,4.80173241023982,8.41767423545896,1.30120442962704,1.14951052216736,1.44049703844279,2.41127708537144,2.4493139694478,3.07472928683639,1.78033276663485,7.50239775143145,0.862271971731369,0.378212160335639,1.75951124163949,2.41115305670332,2.50242524303038,4.87553033131033,4.32142486456681,1.39323986772945,4.21327912387941,4.88961023517959,6.53576048609863,2.48550927042602,3.28336483973535,5.04173772090842,4.97163944728941,4.72234156193769,5.707883176833,6.51095045301142,4.82892122519315,10.6256461554124,7.73431294593358,8.86504306027114,14.4302480991623,17.1053985287639,17.344459107993,18.2520729514106,4.6263788684108,2.6755199218614,2.31293148088659,4.49565963328025,0.639864751605702,1.85789337488351,2.70621668776396,3.22693639397348,3.33567065767305,3.42406127002606,4.74529061544512,8.72904460037258,8.29406189040889,7.75930240960488,6.23885078781184,5.39291645192533,5.40345124686736,5.57595565112228,0.948339504765408,1.37098215131675,0,3.25842124552503,2.52138233317913,4.41855665309007,10.0546094027569,8.56138858281692,7.53593893638599,11.9695249004147,21.6410417773619,1.50160595144485,3.34150291692445,3.59779379815766,5.88294352026658,11.0941493486112,13.2405442926338,9.78166867332756,15.7271169971784,14.5517548989683,17.2521847832825,25.3055844414582,22.7787501373629,29.8043075977592,22.9628689308048,27.4992807177119,22.1703828199926,1.70542270593436,2.11854469374634,2.20668611507745,3.28566347603903,5.69521275302174,8.09348379012447,9.36641509717434,8.82756806994669,12.4020226203314,11.4807433433391,22.6131374307718,18.4772930596508,19.9615700842486,28.6503439484617,18.4927932498361,4.42587845717133,5.24279817978992,3.85321415970701,3.28192722458169,0.983609672260053,12.3710754330143,0.315508219416257,1.56175497718655,1.50796378412959,0.238968797952552,0.668396022247182,0.283076530788832,2.42886421004937,0.292255857911312,1.58115111178609,2.57057053137446,5.39372323791421,4.98583690268315,5.86393053672874,5.27904393512113,2.65490276679926,1.45668381692989,1.51161778482376,1.69744571780308,4.13422650033082,4.61152721915891,4.9101375701962,8.36127577798263,7.12994756769443,4.10847785316561,5.27093042874994,2.06271086496374,12.2558258071364,1.98067203434441,1.81102157295856,2.57204442037911,2.6601035046341,4.45922044005176,3.9491764944509,10.0473433207818,0.938686832254841,3.1774810629573,5.73373834942901,5.7710188529518,6.13564821444441,4.46315644468353,4.8942661041286,4.10352249362653,6.41257840585672,5.7481843623258,9.7396402054776,7.63631411463923,7.40778109478847,6.02779062415011,4.10082683163076,7.32090154260872,4.07948231985253,2.09927178485487,2.48759952847963,10.5013767981662,1.58167996790568,1.42323626988794,2.80813886136683,2.71814784818809,4.58561383866973,4.18079473792944,10.083721598491,5.49687478166462,8.29535829067474,8.07741107013003,0,1.49516546043979,2.31641886639937,2.33341426012857,4.1331143512874,5.23763989021412,5.16371850041317,5.59878854828985,8.07416952077974,5.55643477899814,5.18454011264158,1.89606672376907,2.02725215290164,1.02710957164827,2.33857481360031,1.9692936523423,0.596044064343795,3.24527713703916,1.62458479892035,1.9183625490148,1.37172251979,1.10908803650525,1.55932609183604,1.82802499116626,1.40252282617883,9.52267611183888,0.221985953374065,0.0897138566094757,0.167884616364078,7.92077335531981,8.25802891985201,5.31139710375069,4.07299920250225,5.01572104035363,0.564751842617067,1.84130094602871,1.71868654031819,1.20297227640581,1.37016503954128,0.755393897389701,2.02506750069542,1.35096360967266,0.453142408984205,1.03552062350364,0.62272408550506,1.99512436700516,1.53660245178721,1.70174701947806,1.04806581313991,1.47074806760011,2.44471400581777,3.09052585858341,3.53011130550997,2.77966932940177,2.78827229879264,3.39527414494937,2.52832070168682,3.45735822986294,4.307660171671,7.1444053692461,2.54945517078682,4.82273051159263,3.29668720642645,2.20798380201596,4.11443102862498,4.08194354166476,3.57654284920981,5.66851024866081,3.48204707536723,4.65380343404221,3.10977553883713,2.89376682581627,3.25929873230068,4.48913817326191,3.32178050747688,3.34915240076916,3.6830793885272,4.02835787083512,4.62975866354739,4.24677982494508,4.67863216890817,7.73535794573874,7.46024495068489,8.6030653456611,7.88350641109433
|short_description=p1@Hfe
}}

Latest revision as of 07:14, 27 September 2015

Short description:p1@Hfe
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hfe_5end
Coexpression cluster:MCL_coexpression_mm9:2705
Association with transcript: 0bp_to_NM_010424, uc007pup.1_5end
EntrezGene:Hfe
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hfe

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C773.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E782.08
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D293.78
Mouse Microglia, donor1.CNhs12629.11718-123C820.07
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.91
Mouse hepatocyte, donor6.CNhs13090.11822-124F423.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.37
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.99
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D717.37
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C111.99
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H18.24
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.27
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.22
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E310.63
heart, neonate N03.CNhs11221.1349-25I27.73
heart, neonate N10.CNhs11118.749-24G18.87
heart, neonate N16.CNhs11209.782-15G114.43
heart, neonate N20.CNhs11127.821-26I617.11
heart, neonate N25.CNhs11196.1351-25D317.34
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D510.05
kidney, neonate N20.CNhs11113.832-19I18.56
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F511.09
liver, embryo E17.CNhs10510.481-18A313.24
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F415.73
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H225.31
liver, neonate N10.CNhs11115.751-24B922.78
liver, neonate N20.CNhs11220.823-25A329.80
liver, neonate N25.CNhs11198.1368-26H122.96
liver, neonate N30.CNhs11106.1382-42D127.50
lung, adult.CNhs10474.28-22B122.17
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E58.83
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A422.61
lung, neonate N25.CNhs11119.1359-25C718.48
lung, neonate N30.CNhs11133.1394-42H219.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H34.46
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G29.74
spleen, embryo E16.CNhs11035.461-43C17.64
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I18.30
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D98.07
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B49.52
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk1.35e-1366
epithelial tube2.53e-1347
trunk region element9.32e-1379
abdomen element2.77e-1249
abdominal segment element2.77e-1249
abdominal segment of trunk2.77e-1249
abdomen2.77e-1249
trunk3.64e-1290
trunk mesenchyme4.35e-1145
exocrine gland1.59e-1025
exocrine system1.59e-1025
liver2.64e-1022
epithelial sac2.64e-1022
digestive gland2.64e-1022
epithelium of foregut-midgut junction2.64e-1022
anatomical boundary2.64e-1022
hepatobiliary system2.64e-1022
foregut-midgut junction2.64e-1022
hepatic diverticulum2.64e-1022
liver primordium2.64e-1022
septum transversum2.64e-1022
liver bud2.64e-1022
mesenchyme5.66e-1061
entire embryonic mesenchyme5.66e-1061
digestive tract diverticulum1.49e-0923
sac1.49e-0923
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