Personal tools

FFCP PHASE1:Mm9::chr3:113733502..113733556,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:113733502..113733556,+ |short_description=p1@Col11a1 |description=CAGE_peak_1_at_Col11a1_5end |association_with_transcript=44bp_to_ENSMUST00000029583,ENSMU...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:113733502..113733556,+
|DHSsupport=NA
|short_description=p1@Col11a1
|DPIdataset=NA
|description=CAGE_peak_1_at_Col11a1_5end
|association_with_transcript=44bp_to_ENSMUST00000029583,ENSMUST00000029585,ENSMUST00000029586,ENSMUST00000092155,ENSMUST00000123619,NM_007729,uc008rbj.1,uc008rbk.1_5end
|EntrezGene=12814
|EntrezGene=12814
|HGNC=
|HGNC=
|MCL_coexpression_id=1194
|TSSclassifier=NA
|UniProt=E9Q736,E9Q734,E9Q733,Q61245,E9PVT8,Q3UST0,Q8C4S5
|UniProt=E9Q736,E9Q734,E9Q733,Q61245,E9PVT8,Q3UST0,Q8C4S5
|association_with_transcript=44bp_to_ENSMUST00000029583,ENSMUST00000029585,ENSMUST00000029586,ENSMUST00000092155,ENSMUST00000123619,NM_007729,uc008rbj.1,uc008rbk.1_5end
|cluster_id=chr3:113733502..113733556,+
|description=CAGE_peak_1_at_Col11a1_5end
|id=chr3:113733502..113733556,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!5.53e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000026,3.56e-08,12;UBERON:0004708,3.56e-08,12;UBERON:0002101,3.56e-08,12;UBERON:0004357,3.56e-08,12;UBERON:0004347,3.56e-08,12;UBERON:0005732,3.56e-08,12;UBERON:0005733,3.56e-08,12;UBERON:0010707,5.38e-07,13
|phase1_expression=126.357440365682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,7.30201544258348,5.77848507951233,2.56965453026354,19.559783608701,41.4247797122848,42.838805633222,77.3830998315648,30.7970127575798,18.6878333674463,0,0,0,365.308399171045,292.550642177471,389.332429669469,1.82084814773638,2.11596391708813,1.90149421051854,23.041428180701,20.4537803105562,0,0.988866362566974,0,23.3688086204356,16.5213871288268,4.04389488003063,3.10513658162888,3.57552434297349,11.4260393761521,10.3808214247258,0.734944795289724,2.58782771749238,1.83843757322004,2.20231761998777,0.638436690425939,1.53606533256243,3.16527090552465,1.9212405156506,1.56274011167028,0.279182999001381,1.68828783009504,1.5279824777681,16.2045722010517,13.810053037513,6.71038004971082,0.832988126665025,2.79614772395106,0,0,0,0,0,0,19.3813299781818,0,0,0,129.575946194546,0,0,0,0.216491041011214,0,0.505524445014783,2.39786147410026,0,0.445326417194474,5.55153045651635,7.30717147949139,4.15107895060905,1.80867168663147,3.29248379979973,0,0.247194967734374,0,30.0767587662957,627.817144645895,334.795741985957,539.181281486367,0,0,0.209446706813455,0,0,0,0,2.24685959107234,0,1.38219787324151,1.04294592115366,1.02286182932132,2.49345653471472,1.29793010454206,12.1188842981876,373.594132742109,1.76905930903572,1.47309299120532,13.1421647392331,7.81667155073808,25.9289466919703,59.9805174986146,58.511389270142,60.7259034150188,49.0997036692979,23.8007101079894,10.5628316537093,51.247747725479,123.86959141142,222.045276949133,245.793768315429,345.117897023467,354.562621030887,6.56813080501028,0,0,0,2.27838349789052,3.75241695969754,3.78130329068131,4.26140524053378,1.57411385397923,4.9365476123961,5.11574678450897,8.85302224618743,3.73649095574942,5.10135534731789,2.13417703302824,0.648550476366846,0.438599962275997,0.439100230582101,0.268412837520744,0.841159794256509,2.88132914661996,0.330418782983798,0,5.54549451391608,6.96710015581316,7.21657783403723,1.4117846723634,2.00140239460383,0.760902504450237,0,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.398282546508734,1.70701110857774,3.77020091612105,2.25415471346161,2.03651327845314,0.775809948670503,1.1221731182451,1.13825766823663,0,0,0,0,1.66845105716094,1.76903095601883,1.57403478669398,3.04290182082754,4.10001171579109,4.07401362850272,2.5892652370573,1.94562272130042,0.549122826376163,10.0637744569148,1.11642284300551,0.936113019343682,0,0.896987067609561,0,0,10.2325362356062,8.31121379854332,5.60158783058121,4.22442446919304,2.1775813467436,4.76087281772027,6.04914308359176,2.67979744980525,0.44292937929755,2.55127629851979,2.13022309130459,3.28101465545202,0.723245292907558,0,0,1.47529281905711,2.48343071674259,3.05046120976805,3.16471553798949,1.80328439914343,88.3648245215306,16.0909191902291,14.4462335389756,19.8189525914175,10.2756583119597,9.35754431146055,4.24614796183249,12.1443210502468,15.1973046113882,13.4397844501818,4.17717711348349,9.08416545332919,4.45164009168138,3.90928702448583,1.97964147567043,0,4.61283208694465,6.04647113929502,1.50884063804718,6.496641643377,1.84461088766356,2.84271122485043,0.363533729477506,2.49548164869305,0.316036757935816,0,0,0.340439605753788,36.3723409943247,14.8762486350168,28.0781515891386,31.9212420556092,63.8560367015413,62.3640788082038,27.0973804711993,4.22409074514679,0.42366414172764,0.441056796109924,4.45192882941996,7.75029248140347,42.6412379242062,35.4535861689315,19.6969079694074,0.291480836629851,3.33765543618917,0,4.12773735926445,2.22233432843654,0.188368457004691,0,0,0.169978429993855,0,0,0,11.5462637657114,13.419084830372,13.2846569210816,15.8907104970996,11.7915784422936,5.25970950900801,2.89287095038676,1.30877970992015,1.03691978633434,0,0,2.8408143748356,1.48912641411388,7.00024278038572,8.26622870257479,5.4065960157049,4.69428954583016,4.4269490846943,2.20204623293993,1.44950472495604,2.59227005632079,0,3.64905387522296,10.2710957164827,0.649604114888975,4.833720783022,2.58285761215644,0.600977247599844,0,1.81739609906666,0.381034033274999,0.201652370273681,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,2.70465431645067,60.809122046183,1.46521299413812,1.50057865355346,0,1.12950368523413,0.460325236507177,1.71868654031819,0.68741272937475,0.685082519770642,1.5107877947794,0,1.35096360967266,0,0.51776031175182,6.64239024538731,27.9317411380722,70.6837127822115,183.78867810363,73.3646069197938,75.9273689898558,70.2299659853104,71.4941648618963,62.9001650799958,72.5240997762099,73.0020383683891,69.9803726542343,79.5952813494001,74.461252246863,68.8651272777803,76.6832842965749,68.3717523074647,76.0062328626998,87.362210970301,81.2538039141873,81.2600128153434,83.0586772825699,85.5985921910882,78.9231042313544,88.4628175904108,76.9992931814256,72.8053332033635,67.0827764166499,83.519530015205,69.5816416855596,67.8592303670276,70.2336959337767,80.2092844612591,81.0319679402602,172.265603606159,153.633505431837,123.28195765073,118.393950780612,402.088074008709,345.8873451794,291.226001539249
|phase1_expression=126.357440365682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,7.30201544258348,5.77848507951233,2.56965453026354,19.559783608701,41.4247797122848,42.838805633222,77.3830998315648,30.7970127575798,18.6878333674463,0,0,0,365.308399171045,292.550642177471,389.332429669469,1.82084814773638,2.11596391708813,1.90149421051854,23.041428180701,20.4537803105562,0,0.988866362566974,0,23.3688086204356,16.5213871288268,4.04389488003063,3.10513658162888,3.57552434297349,11.4260393761521,10.3808214247258,0.734944795289724,2.58782771749238,1.83843757322004,2.20231761998777,0.638436690425939,1.53606533256243,3.16527090552465,1.9212405156506,1.56274011167028,0.279182999001381,1.68828783009504,1.5279824777681,16.2045722010517,13.810053037513,6.71038004971082,0.832988126665025,2.79614772395106,0,0,0,0,0,0,19.3813299781818,0,0,0,129.575946194546,0,0,0,0.216491041011214,0,0.505524445014783,2.39786147410026,0,0.445326417194474,5.55153045651635,7.30717147949139,4.15107895060905,1.80867168663147,3.29248379979973,0,0.247194967734374,0,30.0767587662957,627.817144645895,334.795741985957,539.181281486367,0,0,0.209446706813455,0,0,0,0,2.24685959107234,0,1.38219787324151,1.04294592115366,1.02286182932132,2.49345653471472,1.29793010454206,12.1188842981876,373.594132742109,1.76905930903572,1.47309299120532,13.1421647392331,7.81667155073808,25.9289466919703,59.9805174986146,58.511389270142,60.7259034150188,49.0997036692979,23.8007101079894,10.5628316537093,51.247747725479,123.86959141142,222.045276949133,245.793768315429,345.117897023467,354.562621030887,6.56813080501028,0,0,0,2.27838349789052,3.75241695969754,3.78130329068131,4.26140524053378,1.57411385397923,4.9365476123961,5.11574678450897,8.85302224618743,3.73649095574942,5.10135534731789,2.13417703302824,0.648550476366846,0.438599962275997,0.439100230582101,0.268412837520744,0.841159794256509,2.88132914661996,0.330418782983798,0,5.54549451391608,6.96710015581316,7.21657783403723,1.4117846723634,2.00140239460383,0.760902504450237,0,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.398282546508734,1.70701110857774,3.77020091612105,2.25415471346161,2.03651327845314,0.775809948670503,1.1221731182451,1.13825766823663,0,0,0,0,1.66845105716094,1.76903095601883,1.57403478669398,3.04290182082754,4.10001171579109,4.07401362850272,2.5892652370573,1.94562272130042,0.549122826376163,10.0637744569148,1.11642284300551,0.936113019343682,0,0.896987067609561,0,0,10.2325362356062,8.31121379854332,5.60158783058121,4.22442446919304,2.1775813467436,4.76087281772027,6.04914308359176,2.67979744980525,0.44292937929755,2.55127629851979,2.13022309130459,3.28101465545202,0.723245292907558,0,0,1.47529281905711,2.48343071674259,3.05046120976805,3.16471553798949,1.80328439914343,88.3648245215306,16.0909191902291,14.4462335389756,19.8189525914175,10.2756583119597,9.35754431146055,4.24614796183249,12.1443210502468,15.1973046113882,13.4397844501818,4.17717711348349,9.08416545332919,4.45164009168138,3.90928702448583,1.97964147567043,0,4.61283208694465,6.04647113929502,1.50884063804718,6.496641643377,1.84461088766356,2.84271122485043,0.363533729477506,2.49548164869305,0.316036757935816,0,0,0.340439605753788,36.3723409943247,14.8762486350168,28.0781515891386,31.9212420556092,63.8560367015413,62.3640788082038,27.0973804711993,4.22409074514679,0.42366414172764,0.441056796109924,4.45192882941996,7.75029248140347,42.6412379242062,35.4535861689315,19.6969079694074,0.291480836629851,3.33765543618917,0,4.12773735926445,2.22233432843654,0.188368457004691,0,0,0.169978429993855,0,0,0,11.5462637657114,13.419084830372,13.2846569210816,15.8907104970996,11.7915784422936,5.25970950900801,2.89287095038676,1.30877970992015,1.03691978633434,0,0,2.8408143748356,1.48912641411388,7.00024278038572,8.26622870257479,5.4065960157049,4.69428954583016,4.4269490846943,2.20204623293993,1.44950472495604,2.59227005632079,0,3.64905387522296,10.2710957164827,0.649604114888975,4.833720783022,2.58285761215644,0.600977247599844,0,1.81739609906666,0.381034033274999,0.201652370273681,0.194915761479505,0,0.116876902181569,0.453460767230423,0,0,0,2.70465431645067,60.809122046183,1.46521299413812,1.50057865355346,0,1.12950368523413,0.460325236507177,1.71868654031819,0.68741272937475,0.685082519770642,1.5107877947794,0,1.35096360967266,0,0.51776031175182,6.64239024538731,27.9317411380722,70.6837127822115,183.78867810363,73.3646069197938,75.9273689898558,70.2299659853104,71.4941648618963,62.9001650799958,72.5240997762099,73.0020383683891,69.9803726542343,79.5952813494001,74.461252246863,68.8651272777803,76.6832842965749,68.3717523074647,76.0062328626998,87.362210970301,81.2538039141873,81.2600128153434,83.0586772825699,85.5985921910882,78.9231042313544,88.4628175904108,76.9992931814256,72.8053332033635,67.0827764166499,83.519530015205,69.5816416855596,67.8592303670276,70.2336959337767,80.2092844612591,81.0319679402602,172.265603606159,153.633505431837,123.28195765073,118.393950780612,402.088074008709,345.8873451794,291.226001539249
|short_description=p1@Col11a1
}}
}}

Latest revision as of 08:41, 27 September 2015

Short description:p1@Col11a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Col11a1_5end
Coexpression cluster:MCL_coexpression_mm9:1194
Association with transcript: 44bp_to_ENSMUST00000029583, ENSMUST00000029585, ENSMUST00000029586, ENSMUST00000092155, ENSMUST00000123619, NM_007729, uc008rbj.1, uc008rbk.1_5end
EntrezGene:Col11a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Col11a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7126.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.78
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C241.42
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B842.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C377.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1365.31
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1292.55
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5389.33
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6129.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F5627.82
bone (os femoris), neonate N16.CNhs11225.1525-43A6334.80
bone (os femoris), neonate N20.CNhs11195.1350-25C3539.18
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2373.59
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C613.14
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C925.93
eyeball, embryo E17.CNhs11023.1261-18D459.98
eyeball, neonate N00.CNhs11207.633-15C658.51
eyeball, neonate N01.CNhs11140.1532-43E760.73
eyeball, neonate N02.CNhs11205.1551-44G849.10
eyeball, neonate N16.CNhs11188.777-19A223.80
forelimb, embryo E11.CNhs10596.335-25E210.56
forelimb, embryo E12.CNhs10600.359-14H251.25
forelimb, embryo E13.CNhs10589.384-1E2123.87
forelimb, embryo E14.CNhs10577.413-26A8222.05
forelimb, embryo E15.CNhs11007.437-20E7245.79
forelimb, embryo E17.CNhs10598.1517-43C4345.12
forelimb, embryo E18.CNhs11008.1520-43B5354.56
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C288.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E636.37
pituitary gland, embryo E13.CNhs11009.370-44C714.88
pituitary gland, embryo E14.CNhs11037.398-44A528.08
pituitary gland, embryo E15.CNhs10592.427-16B931.92
pituitary gland, embryo E16.CNhs11036.449-43F663.86
pituitary gland, embryo E17.CNhs11039.1265-44F562.36
pituitary gland, neonate N00.CNhs11190.1308-22E927.10
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H342.64
skin, neonate N06.CNhs11097.693-20I535.45
skin, neonate N10.CNhs11108.762-6C419.70
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E311.55
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D515.89
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A92.89
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.27
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I210.27
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F560.81
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I86.64
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H270.68
whole body, embryo E14.5.CNhs10578.420-27D2183.79
whole body, embryo E14.CNhs10519.395-14B173.36
whole body, embryo E16.CNhs10514.453-14F275.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G571.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G562.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G572.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G573.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G569.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G579.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G574.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G568.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G576.68
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G568.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G576.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G587.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G581.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G581.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G583.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G585.60
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G578.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G588.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G577.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G572.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G567.08
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G583.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G569.58
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G567.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G570.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G580.21
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G581.03
whole body, embryo E17.5.CNhs10513.490-9F9172.27
whole body, embryo E17.CNhs10517.475-3I5153.63
whole body, embryo E18.CNhs10516.493-3B3123.28
whole body, neonate N00.CNhs10525.657-19C2118.39
whole body, neonate N01.CNhs10576.659-23C6402.09
whole body, neonate N06.CNhs10515.692-21D1345.89
whole body, neonate N10.CNhs10518.761-6B4291.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
appendage3.56e-0812
paired limb/fin3.56e-0812
limb3.56e-0812
paired limb/fin bud3.56e-0812
limb bud3.56e-0812
limb/fin field3.56e-0812
limb field3.56e-0812
appendage girdle complex5.38e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:113733502..113733556,%2B&oldid=4301055"