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FFCP PHASE1:Mm9::chr1:7079211..7079259,+: Difference between revisions

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{{FFCP|EntrezGene=319263|HGNC=|MCL_coexpression_id=1522|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8|association_with_transcript=210bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end|description=CAGE_peak_3_at_Pcmtd1_5end|id=chr1:7079211..7079259,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.31e-12!51;UBERON:0003914!1.39e-09!47;UBERON:0002365!1.34e-08!25;UBERON:0002330!1.34e-08!25;UBERON:0005256!1.67e-08!47;UBERON:0002100!2.63e-08!98;UBERON:0009854!2.92e-07!23;UBERON:0009856!2.92e-07!23;UBERON:0005177!5.23e-07!85;UBERON:0002107!5.37e-07!22;UBERON:0007499!5.37e-07!22;UBERON:0006925!5.37e-07!22;UBERON:0009497!5.37e-07!22;UBERON:0000015!5.37e-07!22;UBERON:0002423!5.37e-07!22;UBERON:0006235!5.37e-07!22;UBERON:0008835!5.37e-07!22;UBERON:0003894!5.37e-07!22;UBERON:0004161!5.37e-07!22;UBERON:0008836!5.37e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.32e-12,51;UBERON:0002100,8.41e-10,90;UBERON:0003914,1.38e-09,47;UBERON:0005256,7.14e-09,45;UBERON:0003104,1.06e-08,61;UBERON:0009142,1.06e-08,61;UBERON:0002365,1.33e-08,25;UBERON:0002330,1.33e-08,25;UBERON:0005177,2.89e-08,79;UBERON:0009854,2.91e-07,23;UBERON:0009856,2.91e-07,23;UBERON:0002107,5.36e-07,22;UBERON:0007499,5.36e-07,22;UBERON:0006925,5.36e-07,22;UBERON:0009497,5.36e-07,22;UBERON:0000015,5.36e-07,22;UBERON:0002423,5.36e-07,22;UBERON:0006235,5.36e-07,22;UBERON:0008835,5.36e-07,22;UBERON:0003894,5.36e-07,22;UBERON:0004161,5.36e-07,22;UBERON:0008836,5.36e-07,22|phase1_expression=7.20669811971573,3.14077866875425,4.09499315450582,12.40103266358,6.01074875935617,3.18970616632591,5.13947809310157,4.13194635013044,0.84473233291,1.40438715793196,0.513653904676515,0.319088635981346,3.76641605848653,2.53519167015092,1.66554880907831,4.656931149966,2.09868563438444,13.0916798623669,12.614527891728,14.429248161133,13.0966666832647,1.98581902401771,2.61199789138935,6.07971206614945,5.50582274561208,1.14846392823004,3.01533397311352,2.80112602491656,7.60093677825496,6.04872311423834,3.54768817048488,0,1.84519436275371,0,5.77703239502549,3.65716219788683,4.69589519403449,6.27797446105362,3.906676722619,8.89990364755457,11.7646297606203,8.19654581950135,7.2826552954673,29.0821649523584,30.0075716409763,24.228171285342,5.47673941043627,3.05235218932625,2.41654801007919,6.22175677037707,2.65974201088189,4.31257693094915,15.939347575485,4.35217285206807,4.7053131879945,8.48956138918625,13.7536051170603,10.3134418455488,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,2.69640099466564,1.53687322128622,0.829516898467821,1.08004750665353,0.210324961351382,3.71346279724945,3.75476519617743,0.979926393719632,0.670918297127655,0,11.0115880999389,14.939418555967,16.5895055916743,0.527545150920775,0.731901148819277,1.04182674111352,11.1673199600552,15.1945904708554,13.1406493088057,4.12480019663135,5.83723891276322,1.3047961207771,6.20954785332109,14.3585964202892,38.5519769973231,20.6501730475533,7.47968467078526,51.8115063972304,59.7794304051856,75.2685170323524,34.6897717725427,11.2484012901518,9.61208217030615,6.71345191569646,8.02807492727079,21.815501160434,15.2883143823987,0,3.46385665617943,2.78695852022608,0.505524445014783,39.2792546233566,22.2686579936568,22.2663208597237,2.94925055502431,7.61163695780353,7.61031140944993,9.04335843315735,9.17191915658498,14.4516580029127,10.6293836125781,57.6951434110447,7.96149496754887,5.50007289821191,11.0420759230197,13.091631834651,16.775258509631,22.2513405728776,24.9241581108012,13.2837668708468,2.03685711660064,0.599902730993408,1.52484272487678,18.1246673679835,14.1825186873774,1.50785222535437,17.7300806596122,18.9229438424445,15.9996794310861,16.3863675698435,6.82323737797119,18.5366386209039,32.0957903210767,36.8273247801329,2.73252930221678,4.13823787980251,6.66229880279792,6.0281927134286,6.05524842446818,7.43059577652129,7.12133106653939,22.7658966250334,2.37124792226126,2.83659120251729,3.34307135911503,2.6303487891309,3.05851974148158,6.268538997399,10.7006710932131,5.57295947091781,0.702213187313235,1.28673953557358,2.27330799516474,4.14251545071004,3.28336483973535,5.58192390529146,5.91861838963026,8.46086196513836,11.2614992407786,12.556833016522,9.65784245038629,12.8441876603886,10.5318303944627,18.5509234409378,23.5099547682982,28.5089975479398,27.6633145266724,35.027875296457,13.8791366052324,2.46971069710283,20.1555457620117,8.72686869989696,3.19932375802851,4.87697010906921,4.12375876230699,8.47070803418039,5.78182913996663,8.3699275489526,7.11793592316767,5.59976446061637,12.5667604400135,12.3353012665514,12.8676297498619,10.7858329038507,13.1844210423563,16.5287256801125,1.89667900953082,4.45569199177942,14.6520056375005,7.33144780243131,6.20647958936402,12.2036326609154,15.5561881325673,29.8172498918796,30.7717506569095,25.9134044235781,59.88343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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319263
|HGNC=
|MCL_coexpression_id=1522
|TSSclassifier=NA
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|association_with_transcript=210bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|cluster_id=chr1:7079211..7079259,+
|description=CAGE_peak_3_at_Pcmtd1_5end
|id=chr1:7079211..7079259,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!4.31e-12!51;UBERON:0003914!1.39e-09!47;UBERON:0002365!1.34e-08!25;UBERON:0002330!1.34e-08!25;UBERON:0005256!1.67e-08!47;UBERON:0002100!2.63e-08!98;UBERON:0009854!2.92e-07!23;UBERON:0009856!2.92e-07!23;UBERON:0005177!5.23e-07!85;UBERON:0002107!5.37e-07!22;UBERON:0007499!5.37e-07!22;UBERON:0006925!5.37e-07!22;UBERON:0009497!5.37e-07!22;UBERON:0000015!5.37e-07!22;UBERON:0002423!5.37e-07!22;UBERON:0006235!5.37e-07!22;UBERON:0008835!5.37e-07!22;UBERON:0003894!5.37e-07!22;UBERON:0004161!5.37e-07!22;UBERON:0008836!5.37e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.32e-12,51;UBERON:0002100,8.41e-10,90;UBERON:0003914,1.38e-09,47;UBERON:0005256,7.14e-09,45;UBERON:0003104,1.06e-08,61;UBERON:0009142,1.06e-08,61;UBERON:0002365,1.33e-08,25;UBERON:0002330,1.33e-08,25;UBERON:0005177,2.89e-08,79;UBERON:0009854,2.91e-07,23;UBERON:0009856,2.91e-07,23;UBERON:0002107,5.36e-07,22;UBERON:0007499,5.36e-07,22;UBERON:0006925,5.36e-07,22;UBERON:0009497,5.36e-07,22;UBERON:0000015,5.36e-07,22;UBERON:0002423,5.36e-07,22;UBERON:0006235,5.36e-07,22;UBERON:0008835,5.36e-07,22;UBERON:0003894,5.36e-07,22;UBERON:0004161,5.36e-07,22;UBERON:0008836,5.36e-07,22
|phase1_expression=7.20669811971573,3.14077866875425,4.09499315450582,12.40103266358,6.01074875935617,3.18970616632591,5.13947809310157,4.13194635013044,0.84473233291,1.40438715793196,0.513653904676515,0.319088635981346,3.76641605848653,2.53519167015092,1.66554880907831,4.656931149966,2.09868563438444,13.0916798623669,12.614527891728,14.429248161133,13.0966666832647,1.98581902401771,2.61199789138935,6.07971206614945,5.50582274561208,1.14846392823004,3.01533397311352,2.80112602491656,7.60093677825496,6.04872311423834,3.54768817048488,0,1.84519436275371,0,5.77703239502549,3.65716219788683,4.69589519403449,6.27797446105362,3.906676722619,8.89990364755457,11.7646297606203,8.19654581950135,7.2826552954673,29.0821649523584,30.0075716409763,24.228171285342,5.47673941043627,3.05235218932625,2.41654801007919,6.22175677037707,2.65974201088189,4.31257693094915,15.939347575485,4.35217285206807,4.7053131879945,8.48956138918625,13.7536051170603,10.3134418455488,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,2.69640099466564,1.53687322128622,0.829516898467821,1.08004750665353,0.210324961351382,3.71346279724945,3.75476519617743,0.979926393719632,0.670918297127655,0,11.0115880999389,14.939418555967,16.5895055916743,0.527545150920775,0.731901148819277,1.04182674111352,11.1673199600552,15.1945904708554,13.1406493088057,4.12480019663135,5.83723891276322,1.3047961207771,6.20954785332109,14.3585964202892,38.5519769973231,20.6501730475533,7.47968467078526,51.8115063972304,59.7794304051856,75.2685170323524,34.6897717725427,11.2484012901518,9.61208217030615,6.71345191569646,8.02807492727079,21.815501160434,15.2883143823987,0,3.46385665617943,2.78695852022608,0.505524445014783,39.2792546233566,22.2686579936568,22.2663208597237,2.94925055502431,7.61163695780353,7.61031140944993,9.04335843315735,9.17191915658498,14.4516580029127,10.6293836125781,57.6951434110447,7.96149496754887,5.50007289821191,11.0420759230197,13.091631834651,16.775258509631,22.2513405728776,24.9241581108012,13.2837668708468,2.03685711660064,0.599902730993408,1.52484272487678,18.1246673679835,14.1825186873774,1.50785222535437,17.7300806596122,18.9229438424445,15.9996794310861,16.3863675698435,6.82323737797119,18.5366386209039,32.0957903210767,36.8273247801329,2.73252930221678,4.13823787980251,6.66229880279792,6.0281927134286,6.05524842446818,7.43059577652129,7.12133106653939,22.7658966250334,2.37124792226126,2.83659120251729,3.34307135911503,2.6303487891309,3.05851974148158,6.268538997399,10.7006710932131,5.57295947091781,0.702213187313235,1.28673953557358,2.27330799516474,4.14251545071004,3.28336483973535,5.58192390529146,5.91861838963026,8.46086196513836,11.2614992407786,12.556833016522,9.65784245038629,12.8441876603886,10.5318303944627,18.5509234409378,23.5099547682982,28.5089975479398,27.6633145266724,35.027875296457,13.8791366052324,2.46971069710283,20.1555457620117,8.72686869989696,3.19932375802851,4.87697010906921,4.12375876230699,8.47070803418039,5.78182913996663,8.3699275489526,7.11793592316767,5.59976446061637,12.5667604400135,12.3353012665514,12.8676297498619,10.7858329038507,13.1844210423563,16.5287256801125,1.89667900953082,4.45569199177942,14.6520056375005,7.33144780243131,6.20647958936402,12.2036326609154,15.5561881325673,29.8172498918796,30.7717506569095,25.9134044235781,59.8834306716041,2.66952169145751,4.32429789249047,5.17182858485164,7.91154473415161,12.3000351473733,19.3515647353879,26.1803485080238,23.8338783359302,19.7684217495419,50.3188722845741,36.8419538191818,43.3732365629239,41.4229359833263,47.5403145833067,64.6474318626912,23.6484083413254,2.27389694124582,3.7481944581666,4.2436271443797,7.04070744865506,10.887906733718,12.8543566078447,10.9274842800367,15.1329738341943,13.2878813789265,13.3942005672289,23.1047273749191,20.2041428783098,23.4331474902049,18.0949540727127,5.98296252200581,33.9317348383135,30.0771053472158,24.5642402681322,20.6292568402278,9.18035694109382,38.1231100078603,5.99465616890888,5.0757036758563,6.46270193198397,7.64700153448166,8.68914828921337,8.49229592366497,7.2865926301481,7.01414058987149,8.30104333687699,18.6366363524648,24.2717545706139,3.38324646967785,6.67836533349662,30.5194727499191,66.3725691699814,2.91336763385978,3.32555912661226,18.6719028958339,8.85905678642318,25.517117279346,16.2809824695979,19.2672876623078,17.8248689192361,32.2357493094532,51.6551182017494,52.5991270565753,25.1925308257803,2.88097750450096,1.16422815404479,3.21505552547388,5.67488747655275,4.28085162244969,6.58196082408484,2.13125464380219,14.0803024838226,12.7099242518292,34.1819016985191,21.2703266294509,11.1410454420175,10.1325713879302,8.47543642422269,10.3408766839389,8.45294426226567,26.8866687915239,8.88528580148834,4.95328483111734,6.66700298530962,5.08594833912666,6.69801715833023,6.17701067657611,2.88963330989554,5.03825228365169,3.04039942369732,16.2294005062569,2.53068794864908,5.28630614529807,7.77638453916969,9.40897332065109,10.6997656235627,12.002926828249,17.9357998923979,18.8464278228501,12.7022673825957,59.6485740563449,0.56369293868419,6.27969493384711,4.79829622325583,5.05573089694524,4.39143399824286,7.94093789806657,7.74557775061976,8.46328501485676,13.0025587087881,5.31485065817213,8.64090018773596,7.58426689507628,2.43270258348197,2.97861775777999,4.02754551231165,4.29664069601955,3.77494574084403,3.60586348559907,2.95379054349154,3.73575864808146,2.13379058634,1.91569751759997,4.28814675254911,4.13710919053417,5.02570679380746,28.7947587191318,1.77588762699252,1.34570784914214,2.85403847818933,31.6830934212792,24.0233568577513,19.7803754208646,19.2931541171159,32.6021867622986,9.03602948187307,5.06357760157895,10.8850147553485,6.18671456437275,18.4972280338073,17.3740596399631,12.8254275044043,16.2115633160719,12.6879874515577,10.3552062350364,2.38710899443606,2.79317411380722,3.75613932659095,4.86213434136588,2.30574478890781,8.27295788025063,11.3345831178824,8.85950746127245,10.9112531261217,12.3821633764261,11.9135270948413,9.61994341068989,9.92599979180754,11.1403765184473,10.0512070672323,12.859929664643,9.03897742369873,9.45255180272155,8.65380391686944,9.42073088860143,10.2860775715625,10.4710725634009,12.637118067208,9.59286349773368,11.1990162694243,10.2383675548929,9.14639864363863,10.2597187460759,10.1853085384396,7.85599180320834,7.3553711236988,8.86540341380071,11.867700251921,11.0005157242036,11.3814900478873,2.99772693525535,8.4215379040347,10.09893954027,9.56441660344217,12.5737108898124,13.9120701372253
|short_description=p3@Pcmtd1
}}

Latest revision as of 13:09, 1 October 2015

Short description:p3@Pcmtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pcmtd1_5end
Coexpression cluster:MCL_coexpression_mm9:1522
Association with transcript: 210bp_to_ENSMUST00000061280, ENSMUST00000172291, NM_183028, uc007agb.1, uc007agc.1, uc011why.1_5end
EntrezGene:Pcmtd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pcmtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B97.60
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.94
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F914.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C851.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F459.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F675.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.28
accessory axillary lymph node, adult.CNhs10475.1063-29H922.27
adrenal gland, adult.CNhs10508.49-24D722.27
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I314.45
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H157.70
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B222.25
cerebellum, neonate N30.CNhs11135.1395-42I224.92
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A418.12
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B216.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.54
epididymis, adult.CNhs10490.58-23B232.10
eyeball, adult.CNhs10484.31-12G436.83
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A222.77
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B510.70
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C611.26
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E312.84
heart, neonate N03.CNhs11221.1349-25I210.53
heart, neonate N10.CNhs11118.749-24G118.55
heart, neonate N16.CNhs11209.782-15G123.51
heart, neonate N20.CNhs11127.821-26I628.51
heart, neonate N25.CNhs11196.1351-25D327.66
heart, neonate N30.CNhs11202.1390-42D235.03
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I320.16
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F212.34
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G116.53
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G712.20
kidney, neonate N10.CNhs11206.758-6D515.56
kidney, neonate N20.CNhs11113.832-19I129.82
kidney, neonate N25.CNhs11122.1353-25F330.77
kidney, neonate N30.CNhs11203.1385-42H125.91
liver, adult pregnant day01.CNhs10466.508-5B259.88
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F512.30
liver, embryo E17.CNhs10510.481-18A319.35
liver, embryo E18.CNhs10579.499-43G426.18
liver, neonate N00.CNhs11117.641-24F423.83
liver, neonate N03.CNhs11123.1345-25G219.77
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B943.37
liver, neonate N20.CNhs11220.823-25A341.42
liver, neonate N25.CNhs11198.1368-26H147.54
liver, neonate N30.CNhs11106.1382-42D164.65
lung, adult.CNhs10474.28-22B123.65
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A610.89
lung, embryo E18.CNhs10583.1287-20I612.85
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E515.13
lung, neonate N07.CNhs11111.715-19A313.29
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A423.10
lung, neonate N25.CNhs11119.1359-25C720.20
lung, neonate N30.CNhs11133.1394-42H223.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B633.93
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C224.56
medulla oblongata, neonate N30.CNhs11200.1396-42A320.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C238.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I724.27
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G630.52
pancreas, adult.CNhs10486.34-16E466.37
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E518.67
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I725.52
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B632.24
pancreas, neonate N25.CNhs11094.1555-45E251.66
pancreas, neonate N30.CNhs11182.1548-44H552.60
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I714.08
placenta, adult pregnant day17.CNhs10464.577-18G312.71
prostate, adult.CNhs10470.859-1F834.18
skin, adult.CNhs10492.30-1C321.27
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H310.13
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D59.41
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B812.00
stomach, neonate N07.CNhs11210.718-18A917.94
stomach, neonate N25.CNhs11104.1355-25E418.85
stomach, neonate N30.CNhs11134.1386-42I112.70
submandibular gland, adult.CNhs10469.59-29C159.65
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D913.00
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.98
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G25.03
tongue, adult.CNhs10499.32-1B428.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E431.68
uterus, adult pregnant day19.CNhs10497.590-15F524.02
uterus, adult.CNhs10509.92-27E519.78
vagina, adult.CNhs10502.89-27D519.29
vesicular gland, adult.CNhs10491.51-27F832.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B413.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism4.32e-1251
trunk8.41e-1090
epithelial tube1.38e-0947
trunk mesenchyme7.14e-0945
mesenchyme1.06e-0861
entire embryonic mesenchyme1.06e-0861
exocrine gland1.33e-0825
exocrine system1.33e-0825
trunk region element2.89e-0879
digestive tract diverticulum2.91e-0723
sac2.91e-0723
liver5.36e-0722
epithelial sac5.36e-0722
digestive gland5.36e-0722
epithelium of foregut-midgut junction5.36e-0722
anatomical boundary5.36e-0722
hepatobiliary system5.36e-0722
foregut-midgut junction5.36e-0722
hepatic diverticulum5.36e-0722
liver primordium5.36e-0722
septum transversum5.36e-0722
liver bud5.36e-0722
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