FFCP PHASE1:Mm9::chr15:99650250..99650266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=65970 | |EntrezGene=65970 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CD09,Q9ERG0,Q8C3R7 | |UniProt=Q8CD09,Q9ERG0,Q8C3R7 | ||
|association_with_transcript=306bp_to_ENSMUST00000109024,NM_023063,uc007xqh.2_5end | |association_with_transcript=306bp_to_ENSMUST00000109024,NM_023063,uc007xqh.2_5end | ||
|cluster_id=chr15:99650250..99650266,- | |||
|description=CAGE_peak_4_at_Lima1_5end | |description=CAGE_peak_4_at_Lima1_5end | ||
|id=chr15:99650250..99650266,- | |id=chr15:99650250..99650266,- | ||
|ontology_enrichment_celltype=CL:0000393!1.66e-10!39;CL:0000211!1.66e-10!39;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0000107!2.48e-07!9;CL:0000055!4.43e-07!50 | |ontology_enrichment_celltype=CL:0000393!1.66e-10!39;CL:0000211!1.66e-10!39;CL:0000540!1.48e-08!33;CL:0000047!1.48e-08!33;CL:0000031!1.48e-08!33;CL:0000404!1.48e-08!33;CL:0000107!2.48e-07!9;CL:0000055!4.43e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.31e-19,9;CL:0000393,1.48e-16,39;CL:0000211,1.48e-16,39;CL:0002609,9.26e-16,6;CL:0000540,2.50e-15,33;CL:0000047,2.50e-15,33;CL:0000031,2.50e-15,33;CL:0000404,2.50e-15,33;CL:0002319,5.67e-11,43;CL:0000221,1.20e-10,44;CL:0000133,1.20e-10,44;CL:0002608,3.75e-09,3;CL:0002321,1.36e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.48e-07!9;UBERON:0000010!3.50e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.31e-19,9;UBERON:0000010,3.56e-15,11;UBERON:0000011,2.75e-09,3;UBERON:0000013,8.29e-09,3;UBERON:0002102,8.42e-09,7;UBERON:0004710,8.42e-09,7;UBERON:0005419,8.42e-09,7;UBERON:0005417,8.42e-09,7;UBERON:0005729,8.42e-09,7;UBERON:0010708,1.16e-07,8 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,2.23029248682932,1.83546752161682,0,0.218025156380447,0,0,0.839918529752175,0,0.167782606057736,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0,0,0,0,1.03689612308478,1.75507719831198,1.68259969081106,0,0.883474163806454,1.71487118900936,2.87536413054709,1.83843757322004,0,0.127687338085188,0,0.395658863190582,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,0.711858403995515,0.186399445825301,0.302904773332736,0.529000920747499,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.35333957451034,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0.766371165625774,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0.162241263067758,0.407357455401265,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.544291993210623,0.384341160854549,0.187403449119458,0,1.07783996466421,0.756424320671277,1.23165786914764,1.31517439456545,2.22437799380478,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.823236899034275,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,1.51296634912286,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.561086559122548,0.126473074248515,0,0.31399745568275,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0,5.75072826109418,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,1.10732344824387,0.956728611944923,0.491589944147214,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0.504941854408746,0.94652465824877,2.73307121007647,1.50796378412959,1.91175038362042,2.00518806674155,2.26461224631066,1.61924280669958,1.75353514746787,1.97643888973262,0,0.425820255624806,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.643011105094777,0.354680467284547,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.645857706783622,0.784068024066026,0.716234064018819,0.820704498725306,0.874442509889552,0,0.341741761595705,0.412773735926445,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,1.67270636811575,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.616265742988964,0.25984164595559,0.358053391334963,0,0.240390899039938,0,0.100966449948148,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.467507608726276,0.680191150845634,0,0.179427713218951,0,0.19318959403219,0.563047426353546,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0.824140228955577,0.962757628775446,0,0.760437899670719,0.377252682772152,0.37456602987953,0.704276676453562,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,1.17759136107518,1.02860775715625,0.532427418478012,1.1921809497366,0.872078499793971,1.12931256498397,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.591026894253381,2.45538625901814,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264 | |phase1_expression=0.960893082628764,0.697950815278722,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.503587271902309,2.23029248682932,1.83546752161682,0,0.218025156380447,0,0,0.839918529752175,0,0.167782606057736,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0,0,0,0,1.03689612308478,1.75507719831198,1.68259969081106,0,0.883474163806454,1.71487118900936,2.87536413054709,1.83843757322004,0,0.127687338085188,0,0.395658863190582,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.883885756421003,0.711858403995515,0.186399445825301,0.302904773332736,0.529000920747499,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.35333957451034,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0.766371165625774,0,0,0,0,0,0.502617408451458,0,0.255715457330331,0.20778804455956,0.162241263067758,0.407357455401265,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0.540186389416048,1.05493372485001,0.544291993210623,0.384341160854549,0.187403449119458,0,1.07783996466421,0.756424320671277,1.23165786914764,1.31517439456545,2.22437799380478,1.0447564995665,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.823236899034275,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,1.51296634912286,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.561086559122548,0.126473074248515,0,0.31399745568275,0,0,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0,5.75072826109418,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,1.10732344824387,0.956728611944923,0.491589944147214,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0.504941854408746,0.94652465824877,2.73307121007647,1.50796378412959,1.91175038362042,2.00518806674155,2.26461224631066,1.61924280669958,1.75353514746787,1.97643888973262,0,0.425820255624806,0.534196811001766,0.325773918707152,0,0,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.643011105094777,0.354680467284547,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.645857706783622,0.784068024066026,0.716234064018819,0.820704498725306,0.874442509889552,0,0.341741761595705,0.412773735926445,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,1.67270636811575,0.436725127492355,0.539457385539283,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0,0.675824501963113,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.616265742988964,0.25984164595559,0.358053391334963,0,0.240390899039938,0,0.100966449948148,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.467507608726276,0.680191150845634,0,0.179427713218951,0,0.19318959403219,0.563047426353546,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,0.666740183404846,0.824140228955577,0.962757628775446,0,0.760437899670719,0.377252682772152,0.37456602987953,0.704276676453562,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,1.17759136107518,1.02860775715625,0.532427418478012,1.1921809497366,0.872078499793971,1.12931256498397,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.591026894253381,2.45538625901814,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264 | ||
|short_description=p4@Lima1 | |short_description=p4@Lima1 | ||
}} | }} |
Latest revision as of 14:13, 1 October 2015
Short description: | p4@Lima1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lima1_5end |
Coexpression cluster: | NA |
Association with transcript: | 306bp_to_ENSMUST00000109024, NM_023063, uc007xqh.2_5end |
EntrezGene: | Lima1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.31e-19 | 9 |
electrically responsive cell | 1.48e-16 | 39 |
electrically active cell | 1.48e-16 | 39 |
neuron of cerebral cortex | 9.26e-16 | 6 |
neuron | 2.50e-15 | 33 |
neuronal stem cell | 2.50e-15 | 33 |
neuroblast | 2.50e-15 | 33 |
electrically signaling cell | 2.50e-15 | 33 |
neural cell | 5.67e-11 | 43 |
ectodermal cell | 1.20e-10 | 44 |
neurectodermal cell | 1.20e-10 | 44 |
hippocampal neuron | 3.75e-09 | 3 |
embryonic cell | 1.36e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 7.31e-19 | 9 |
peripheral nervous system | 3.56e-15 | 11 |
parasympathetic nervous system | 2.75e-09 | 3 |
sympathetic nervous system | 8.29e-09 | 3 |
forelimb | 8.42e-09 | 7 |
pectoral appendage | 8.42e-09 | 7 |
pectoral appendage bud | 8.42e-09 | 7 |
forelimb bud | 8.42e-09 | 7 |
forelimb/pectoral fin field | 8.42e-09 | 7 |
pectoral complex | 1.16e-07 | 8 |