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FFCP PHASE1:Mm9::chrX:136145151..136145171,+: Difference between revisions

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{{FFCP|EntrezGene=66889|HGNC=|MCL_coexpression_id=24|UniProt=Q9D304,B1AVW8|association_with_transcript=0bp_to_ENSMUST00000113026,NM_023270,uc009uki.2_5end|description=CAGE_peak_1_at_Rnf128_5end|id=chrX:136145151..136145171,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.10e-15!43;UBERON:0005409!1.10e-11!59;UBERON:0002365!5.40e-11!25;UBERON:0002330!5.40e-11!25;UBERON:0009854!7.57e-11!23;UBERON:0009856!7.57e-11!23;UBERON:0002107!2.13e-10!22;UBERON:0007499!2.13e-10!22;UBERON:0006925!2.13e-10!22;UBERON:0009497!2.13e-10!22;UBERON:0000015!2.13e-10!22;UBERON:0002423!2.13e-10!22;UBERON:0006235!2.13e-10!22;UBERON:0008835!2.13e-10!22;UBERON:0003894!2.13e-10!22;UBERON:0004161!2.13e-10!22;UBERON:0008836!2.13e-10!22;UBERON:0000344!5.80e-10!15;UBERON:0003914!3.14e-09!47;UBERON:0005172!5.13e-09!49;UBERON:0005173!5.13e-09!49;UBERON:0002417!5.13e-09!49;UBERON:0000916!5.13e-09!49;UBERON:0001242!1.18e-08!13;UBERON:0000060!1.18e-08!13;UBERON:0001262!1.18e-08!13;UBERON:0004786!1.18e-08!13;UBERON:0004119!6.02e-07!130;UBERON:0000925!6.02e-07!130;UBERON:0006595!6.02e-07!130;UBERON:0005256!6.39e-07!47;UBERON:0004923!8.68e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-15,31;UBERON:0002365,5.25e-11,25;UBERON:0002330,5.25e-11,25;UBERON:0009854,7.37e-11,23;UBERON:0009856,7.37e-11,23;UBERON:0002107,2.08e-10,22;UBERON:0007499,2.08e-10,22;UBERON:0006925,2.08e-10,22;UBERON:0009497,2.08e-10,22;UBERON:0000015,2.08e-10,22;UBERON:0002423,2.08e-10,22;UBERON:0006235,2.08e-10,22;UBERON:0008835,2.08e-10,22;UBERON:0003894,2.08e-10,22;UBERON:0004161,2.08e-10,22;UBERON:0008836,2.08e-10,22;UBERON:0005409,2.62e-10,47;UBERON:0000344,5.66e-10,15;UBERON:0003914,3.81e-09,47;UBERON:0005172,5.02e-09,49;UBERON:0005173,5.02e-09,49;UBERON:0002417,5.02e-09,49;UBERON:0000916,5.02e-09,49;UBERON:0001242,1.15e-08,13;UBERON:0001262,1.15e-08,13;UBERON:0004786,1.15e-08,13;UBERON:0003104,3.01e-07,61;UBERON:0009142,3.01e-07,61;UBERON:0005256,7.38e-07,45;UBERON:0004923,8.54e-07,24|phase1_expression=7.20669811971573,639.671922202949,798.068665889246,649.390661675764,887.587233464927,205.652108092065,190.160689444758,2.7115897922731,0.84473233291,3.97909694747389,0,0.319088635981346,0,0,4.99664642723494,5.66930748691513,4.89693314689703,0.473193248037357,0.137114433605739,0.84877930359606,13.1817099734158,0,0,398.541125178376,525.347253643819,623.615913028912,477.715053740414,362.207142144979,512.873209112753,471.044312521311,247.672980401975,1.27006134691926,4.30545351309199,0,86.0777826858798,63.6678691723026,84.3219441363584,1.67412652294763,1.5626706890476,1.57057123192139,13.5293242247133,8.19654581950135,6.79714494243615,0.629484089877886,0.912392380975631,0.367093504323363,3.9119567217402,0.872100625521786,0.439372365468944,0.777719596297134,1.95980990275508,0,0.167782606057736,5.07753499407941,0.336093799142464,27.7840190918823,8.30946975822394,71.162748734287,1.82084814773638,3.70293685490423,0.633831403506179,7.79342423759004,3.55717918444456,71.9919773825119,115.697364420336,74.6004120693405,11.3848041996994,0.768436610643109,0.414758449233911,0.270011876663381,0.210324961351382,5.71301968807607,8.39300455616131,0.979926393719632,0.575072826109418,0.919218786610021,24.2254938198655,15.3224805702225,19.8152427900554,1.71452174049252,1.82975287204819,1.04182674111352,18.4260779340911,31.5147061617741,25.5173073787273,6.77645746589436,6.69146899755784,2.23679334990361,10.0715837133135,5.7434385681157,41.7404863730416,128.203157670227,180.872374766262,163.530067066259,200.78091299133,189.067346355076,66.7110995625821,0.340860645156116,0,0,55.0697771326821,0,0,0,15.8038459938186,16.4683912558814,13.1436355703844,118.522867148384,0.776813650941515,43.7904310241233,20.2977832316379,41.7117705287633,39.6658655280421,47.0254638524182,24.8112172056337,35.1866455723091,334.207596376873,3.03658649531814,8.84610551949874,11.6472131962135,8.61281921995535,5.33362778448744,124.882480016142,14.3462590535658,12.7762491156208,192.359162572069,0.239630249011841,0,0.889491589511453,24.1162929441765,16.4700217014706,2.1361239859187,12.8629996942285,9.71718737855256,22.2333207678729,17.1975738851823,13.1372779366908,18.2878246796837,64.9497489174544,114.059485890469,2.47228841629137,3.21862946206862,4.14142898552303,6.93242162044289,2.85753296435577,2.43416068541215,2.52994656311268,31.5618112301599,1.29340795759705,2.26927296201383,3.69497360744293,5.47989331068937,4.17070873838397,4.179025998266,5.76189981942242,16.5198441459349,2.80885274925294,1.54408744268829,1.70498099637356,20.0911999359437,19.9347150983932,19.6267646992506,18.9395788468168,33.0563909335638,28.6936829970524,39.5307706075693,41.582377216941,34.6793066830493,49.0388352742172,53.354425825706,63.6390154934967,82.3105929204621,81.6726428882708,125.348795122187,22.2907345477975,2.98423375899925,363.130242499194,103.135720998782,14.5036010363959,25.7782705765087,35.6962867862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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66889
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=Q9D304,B1AVW8
|association_with_transcript=0bp_to_ENSMUST00000113026,NM_023270,uc009uki.2_5end
|cluster_id=chrX:136145151..136145171,+
|description=CAGE_peak_1_at_Rnf128_5end
|id=chrX:136145151..136145171,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.10e-15!43;UBERON:0005409!1.10e-11!59;UBERON:0002365!5.40e-11!25;UBERON:0002330!5.40e-11!25;UBERON:0009854!7.57e-11!23;UBERON:0009856!7.57e-11!23;UBERON:0002107!2.13e-10!22;UBERON:0007499!2.13e-10!22;UBERON:0006925!2.13e-10!22;UBERON:0009497!2.13e-10!22;UBERON:0000015!2.13e-10!22;UBERON:0002423!2.13e-10!22;UBERON:0006235!2.13e-10!22;UBERON:0008835!2.13e-10!22;UBERON:0003894!2.13e-10!22;UBERON:0004161!2.13e-10!22;UBERON:0008836!2.13e-10!22;UBERON:0000344!5.80e-10!15;UBERON:0003914!3.14e-09!47;UBERON:0005172!5.13e-09!49;UBERON:0005173!5.13e-09!49;UBERON:0002417!5.13e-09!49;UBERON:0000916!5.13e-09!49;UBERON:0001242!1.18e-08!13;UBERON:0000060!1.18e-08!13;UBERON:0001262!1.18e-08!13;UBERON:0004786!1.18e-08!13;UBERON:0004119!6.02e-07!130;UBERON:0000925!6.02e-07!130;UBERON:0006595!6.02e-07!130;UBERON:0005256!6.39e-07!47;UBERON:0004923!8.68e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-15,31;UBERON:0002365,5.25e-11,25;UBERON:0002330,5.25e-11,25;UBERON:0009854,7.37e-11,23;UBERON:0009856,7.37e-11,23;UBERON:0002107,2.08e-10,22;UBERON:0007499,2.08e-10,22;UBERON:0006925,2.08e-10,22;UBERON:0009497,2.08e-10,22;UBERON:0000015,2.08e-10,22;UBERON:0002423,2.08e-10,22;UBERON:0006235,2.08e-10,22;UBERON:0008835,2.08e-10,22;UBERON:0003894,2.08e-10,22;UBERON:0004161,2.08e-10,22;UBERON:0008836,2.08e-10,22;UBERON:0005409,2.62e-10,47;UBERON:0000344,5.66e-10,15;UBERON:0003914,3.81e-09,47;UBERON:0005172,5.02e-09,49;UBERON:0005173,5.02e-09,49;UBERON:0002417,5.02e-09,49;UBERON:0000916,5.02e-09,49;UBERON:0001242,1.15e-08,13;UBERON:0001262,1.15e-08,13;UBERON:0004786,1.15e-08,13;UBERON:0003104,3.01e-07,61;UBERON:0009142,3.01e-07,61;UBERON:0005256,7.38e-07,45;UBERON:0004923,8.54e-07,24
|phase1_expression=7.20669811971573,639.671922202949,798.068665889246,649.390661675764,887.587233464927,205.652108092065,190.160689444758,2.7115897922731,0.84473233291,3.97909694747389,0,0.319088635981346,0,0,4.99664642723494,5.66930748691513,4.89693314689703,0.473193248037357,0.137114433605739,0.84877930359606,13.1817099734158,0,0,398.541125178376,525.347253643819,623.615913028912,477.715053740414,362.207142144979,512.873209112753,471.044312521311,247.672980401975,1.27006134691926,4.30545351309199,0,86.0777826858798,63.6678691723026,84.3219441363584,1.67412652294763,1.5626706890476,1.57057123192139,13.5293242247133,8.19654581950135,6.79714494243615,0.629484089877886,0.912392380975631,0.367093504323363,3.9119567217402,0.872100625521786,0.439372365468944,0.777719596297134,1.95980990275508,0,0.167782606057736,5.07753499407941,0.336093799142464,27.7840190918823,8.30946975822394,71.162748734287,1.82084814773638,3.70293685490423,0.633831403506179,7.79342423759004,3.55717918444456,71.9919773825119,115.697364420336,74.6004120693405,11.3848041996994,0.768436610643109,0.414758449233911,0.270011876663381,0.210324961351382,5.71301968807607,8.39300455616131,0.979926393719632,0.575072826109418,0.919218786610021,24.2254938198655,15.3224805702225,19.8152427900554,1.71452174049252,1.82975287204819,1.04182674111352,18.4260779340911,31.5147061617741,25.5173073787273,6.77645746589436,6.69146899755784,2.23679334990361,10.0715837133135,5.7434385681157,41.7404863730416,128.203157670227,180.872374766262,163.530067066259,200.78091299133,189.067346355076,66.7110995625821,0.340860645156116,0,0,55.0697771326821,0,0,0,15.8038459938186,16.4683912558814,13.1436355703844,118.522867148384,0.776813650941515,43.7904310241233,20.2977832316379,41.7117705287633,39.6658655280421,47.0254638524182,24.8112172056337,35.1866455723091,334.207596376873,3.03658649531814,8.84610551949874,11.6472131962135,8.61281921995535,5.33362778448744,124.882480016142,14.3462590535658,12.7762491156208,192.359162572069,0.239630249011841,0,0.889491589511453,24.1162929441765,16.4700217014706,2.1361239859187,12.8629996942285,9.71718737855256,22.2333207678729,17.1975738851823,13.1372779366908,18.2878246796837,64.9497489174544,114.059485890469,2.47228841629137,3.21862946206862,4.14142898552303,6.93242162044289,2.85753296435577,2.43416068541215,2.52994656311268,31.5618112301599,1.29340795759705,2.26927296201383,3.69497360744293,5.47989331068937,4.17070873838397,4.179025998266,5.76189981942242,16.5198441459349,2.80885274925294,1.54408744268829,1.70498099637356,20.0911999359437,19.9347150983932,19.6267646992506,18.9395788468168,33.0563909335638,28.6936829970524,39.5307706075693,41.582377216941,34.6793066830493,49.0388352742172,53.354425825706,63.6390154934967,82.3105929204621,81.6726428882708,125.348795122187,22.2907345477975,2.98423375899925,363.130242499194,103.135720998782,14.5036010363959,25.7782705765087,35.6962867862199,51.832665828199,69.8267057672893,103.482740605232,201.674851156417,212.791049503422,111.090162289719,108.033364318345,113.469098703328,181.561520548153,236.022750463166,356.064596578809,4.36236172192088,13.5955730005577,22.5415471346161,23.4199027022111,33.3598277928316,36.7511696225269,54.320185389737,70.5576507342498,90.902263420156,114.635965283353,184.097081421119,26.8620620202911,33.8081471594709,38.45142121781,59.4380155668314,105.394418811806,159.395783215169,137.231057564037,71.3394997810156,153.754391385326,261.658135879785,246.357307356549,233.404179489691,200.29505021206,145.670699779793,236.879768989413,3.51031061316549,4.54779388249163,0.977789858652155,1.35796068620151,3.05097322775053,2.84760637651087,6.18913466303636,3.90267295715598,1.7339865851681,1.32878813789265,1.43509291791738,1.3109065177259,2.24490476425664,1.88043776155965,88.9668575241706,108.781136763742,47.2093702098275,25.3861806600354,19.1055202085472,18.4022347949759,0,28.5292147740941,5.99465616890888,9.37052986311932,12.0637102730367,11.709471099675,6.23836287430704,5.09537755419898,5.26253912177363,9.9366991689846,8.30104333687699,18.9579576688866,22.0007132072816,11.2181330310371,9.77321756121457,27.2200702904683,23.8941249011933,12.1390318077491,15.4185014052023,42.8133531045889,39.8657555389043,44.8855315998134,56.5957962038404,23.6296924160379,20.6768479463138,23.0706833293146,53.7634903732494,46.4109944616841,42.2145111134697,2.70091641046965,1.29358683782755,3.00071849044229,3.90148514013002,5.52943334566419,8.22745103010605,4.56697423671899,115.458480367345,409.683225050628,37.9308844654535,2.80306630000516,4.03661066739764,2.41251699712623,2.626191568069,1.80554989719567,197.915488071669,17.9862542950194,2.39219233116994,9.90656966223468,9.07453184111587,2.82552685507037,2.32380187125743,2.0590035588587,0.679913719975421,1.11961161858926,0.829199842826543,56.3255664628917,7.43389584915668,11.7925290933572,10.0444966964275,8.78170843260769,16.3771922809633,14.0258920240214,38.5165103680065,84.8089252028256,104.599283446477,96.9289328415604,4.50954350947352,9.56905894681464,8.27292452285488,10.3059129822345,14.3367404060282,10.644235905919,4.5769323071844,8.59348939970071,8.59846624290829,13.0455425246043,11.2331702440568,5.68820017130721,5.6763060281246,7.08705604437308,6.49604114888975,6.80301443536429,3.77494574084403,3.4856680360791,3.39685912501528,2.52416124870369,3.04827226619999,3.32726410951574,3.99577311032985,3.94468550725351,3.74006086981021,14.2840141677583,226.203686488172,175.300875814916,188.366539560496,36.1264540840196,24.9617692350072,52.1982129161705,7.93163002592544,85.2672576860118,10.1655331671072,14.7304075682297,8.02053718815155,10.6548973053086,12.3314853558716,12.8416962556249,10.8003600037089,10.8077088773813,10.8754178156209,11.9084871702919,0.518936737920883,4.38927360741134,11.2684179797729,14.3432963070293,11.1094976192831,13.236732608401,29.3365680698132,24.9302419259062,36.5847898934669,25.017023964616,23.8270541896825,26.9735668182089,19.3837920462657,21.3203757508215,21.5957363273106,22.3858034903045,22.2497905814123,23.7278341170357,23.4888963457885,23.699026141638,24.3437169193645,23.4268064130325,20.2670761455223,28.6332440765687,24.7507670492319,27.4151329569032,21.7684287718599,25.7808317209086,21.592854101492,30.8628249411756,24.4388137335799,22.1635085345018,19.6430900721451,20.6065998777335,23.5346065396992,6.74488560432454,32.9843567908026,23.8506869993611,10.7121465958552,9.70602244125868,11.3615239454007
|short_description=p1@Rnf128
}}

Latest revision as of 15:20, 1 October 2015

Short description:p1@Rnf128
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf128_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000113026, NM_023270, uc009uki.2_5end
EntrezGene:Rnf128
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf128

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5639.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6798.07
CD326+ enterocyte, pool1.CNhs13542.11848-124I3649.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I4887.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7205.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8190.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1398.54
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2525.35
GP2+ M cell, pool1.CNhs13228.11845-124H9623.62
GP2+ M cell, pool2.CNhs13231.11846-124I1477.72
GP2+ M cell, pool3.CNhs13240.11847-124I2362.21
Ileum epithelium, pool1.CNhs13199.10252-104B9512.87
Ileum epithelium, pool2.CNhs13232.10253-104C1471.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8247.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F586.08
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F663.67
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F784.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C571.16
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C771.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7115.70
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D274.60
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D910.07
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7128.20
Mouse hepatocyte, donor1.CNhs13078.11714-123C4180.87
Mouse hepatocyte, donor3.CNhs12615.11637-122C8163.53
Mouse hepatocyte, donor6.CNhs13090.11822-124F4200.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F6189.07
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A766.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G655.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6118.52
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D743.79
adrenal gland, embryo E14.CNhs11038.406-44C520.30
adrenal gland, embryo E16.CNhs11004.1254-43D641.71
adrenal gland, embryo E17.CNhs11043.1263-45I139.67
adrenal gland, embryo E18.CNhs11026.1262-18F547.03
adrenal gland, neonate N00.CNhs11191.1311-23C124.81
adrenal gland, neonate N25.CNhs11223.1377-27I335.19
amnion, adult pregnant day17.5.CNhs10488.583-22A8334.21
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F511.65
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H4124.88
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H7192.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A424.12
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D512.86
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F222.23
diencephalon, neonate N30.CNhs11201.1388-42B217.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.29
epididymis, adult.CNhs10490.58-23B264.95
eyeball, adult.CNhs10484.31-12G4114.06
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A231.56
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I616.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E920.09
heart, embryo E12.CNhs11015.353-12F519.93
heart, embryo E13.CNhs11013.376-3I919.63
heart, embryo E14.CNhs10597.403-26D418.94
heart, embryo E15.CNhs11017.431-16C833.06
heart, embryo E16.CNhs11021.457-17C628.69
heart, embryo E17.CNhs11025.479-18E539.53
heart, embryo E18.CNhs11030.1283-20G341.58
heart, neonate N00.CNhs11213.639-21E334.68
heart, neonate N03.CNhs11221.1349-25I249.04
heart, neonate N10.CNhs11118.749-24G153.35
heart, neonate N16.CNhs11209.782-15G163.64
heart, neonate N20.CNhs11127.821-26I682.31
heart, neonate N25.CNhs11196.1351-25D381.67
heart, neonate N30.CNhs11202.1390-42D2125.35
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I3363.13
intestine, adult.CNhs10496.178-9A3103.14
intestine, embryo E12.CNhs11019.1251-16I514.50
intestine, embryo E13.CNhs11010.381-16D525.78
intestine, embryo E15.CNhs10602.976-16D835.70
intestine, embryo E16.CNhs10585.463-22H451.83
intestine, embryo E17.CNhs10582.482-18D369.83
intestine, embryo E18.CNhs10526.1289-20F7103.48
intestine, neonate N00.CNhs11126.644-26D1201.67
intestine, neonate N01.CNhs11192.1322-23E9212.79
intestine, neonate N06.CNhs11102.688-20B8111.09
intestine, neonate N07.CNhs11095.720-20F2108.03
intestine, neonate N10.CNhs11098.755-23A5113.47
intestine, neonate N20.CNhs11187.827-18D1181.56
intestine, neonate N25.CNhs11121.1352-25E3236.02
intestine, neonate N30.CNhs11131.1384-42G1356.06
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F813.60
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I223.42
kidney, embryo E18.CNhs11001.1288-20C733.36
kidney, neonate N00.CNhs11214.646-21G736.75
kidney, neonate N10.CNhs11206.758-6D554.32
kidney, neonate N20.CNhs11113.832-19I170.56
kidney, neonate N25.CNhs11122.1353-25F390.90
kidney, neonate N30.CNhs11203.1385-42H1114.64
liver, adult pregnant day01.CNhs10466.508-5B2184.10
liver, embryo E12.CNhs10601.355-15F826.86
liver, embryo E13.CNhs10524.378-3H633.81
liver, embryo E14.CNhs10594.409-16E138.45
liver, embryo E15.CNhs10520.433-16D759.44
liver, embryo E16.CNhs10523.462-17F5105.39
liver, embryo E17.CNhs10510.481-18A3159.40
liver, embryo E18.CNhs10579.499-43G4137.23
liver, neonate N00.CNhs11117.641-24F471.34
liver, neonate N03.CNhs11123.1345-25G2153.75
liver, neonate N06.CNhs11101.684-20A8261.66
liver, neonate N07.CNhs11103.716-20H2246.36
liver, neonate N10.CNhs11115.751-24B9233.40
liver, neonate N20.CNhs11220.823-25A3200.30
liver, neonate N25.CNhs11198.1368-26H1145.67
liver, neonate N30.CNhs11106.1382-42D1236.88
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A188.97
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1108.78
mammary gland, adult lactating day02.CNhs10480.595-22B647.21
mammary gland, adult pregnant day19.CNhs10476.588-5H225.39
medulla oblongata, adult.CNhs10477.17-12C219.11
medulla oblongata, neonate N30.CNhs11200.1396-42A318.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.06
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I722.00
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G627.22
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E542.81
pancreas, embryo E17.CNhs10599.1558-45G339.87
pancreas, embryo E18.CNhs10580.1535-43I744.89
pancreas, neonate N00.CNhs11105.645-26G956.60
pancreas, neonate N01.CNhs11138.1531-43D723.63
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B623.07
pancreas, neonate N25.CNhs11094.1555-45E253.76
pancreas, neonate N30.CNhs11182.1548-44H546.41
pituitary gland, adult.CNhs10493.21-1G842.21
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I7115.46
placenta, adult pregnant day17.CNhs10464.577-18G3409.68
prostate, adult.CNhs10470.859-1F837.93
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.41
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I1197.92
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F29.07
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H656.33
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G811.79
stomach, embryo E16.CNhs11022.459-17D410.04
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B814.03
stomach, neonate N07.CNhs11210.718-18A938.52
stomach, neonate N25.CNhs11104.1355-25E484.81
stomach, neonate N30.CNhs11134.1386-42I1104.60
submandibular gland, adult.CNhs10469.59-29C196.93
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F59.57
testis, embryo E15.CNhs11034.443-27C58.27
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I514.34
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I48.59
testis, neonate N10.CNhs11204.763-44D98.60
testis, neonate N20.CNhs11110.839-18H313.05
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I27.09
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3226.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7175.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5188.37
urinary bladder, adult.CNhs10481.879-12E436.13
uterus, adult pregnant day19.CNhs10497.590-15F524.96
uterus, adult.CNhs10509.92-27E552.20
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F885.27
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H211.27
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.38
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.73
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.70
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G528.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.61
whole body, embryo E17.5.CNhs10513.490-9F923.53
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B332.98
whole body, neonate N00.CNhs10525.657-19C223.85
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine3.30e-1531
exocrine gland5.25e-1125
exocrine system5.25e-1125
digestive tract diverticulum7.37e-1123
sac7.37e-1123
liver2.08e-1022
epithelial sac2.08e-1022
digestive gland2.08e-1022
epithelium of foregut-midgut junction2.08e-1022
anatomical boundary2.08e-1022
hepatobiliary system2.08e-1022
foregut-midgut junction2.08e-1022
hepatic diverticulum2.08e-1022
liver primordium2.08e-1022
septum transversum2.08e-1022
liver bud2.08e-1022
gastrointestinal system2.62e-1047
mucosa5.66e-1015
epithelial tube3.81e-0947
abdomen element5.02e-0949
abdominal segment element5.02e-0949
abdominal segment of trunk5.02e-0949
abdomen5.02e-0949
intestinal mucosa1.15e-0813
wall of intestine1.15e-0813
gastrointestinal system mucosa1.15e-0813
mesenchyme3.01e-0761
entire embryonic mesenchyme3.01e-0761
trunk mesenchyme7.38e-0745
organ component layer8.54e-0724
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