FFCP PHASE1:Mm9::chr13:47161800..47161811,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218214 | |EntrezGene=218214 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=95 | |MCL_coexpression_id=95 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CIG3 | |UniProt=Q8CIG3 | ||
|association_with_transcript=-13bp_to_uc011yyy.1_5end | |association_with_transcript=-13bp_to_uc011yyy.1_5end | ||
|cluster_id=chr13:47161800..47161811,+ | |||
|description=CAGE_peak_4_at_Kdm1b_5end | |description=CAGE_peak_4_at_Kdm1b_5end | ||
|id=chr13:47161800..47161811,+ | |id=chr13:47161800..47161811,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.86e-18!59;UBERON:0000160!7.92e-10!43;UBERON:0000945!1.59e-09!16;UBERON:0010039!1.59e-09!16;UBERON:0000162!1.29e-07!3;UBERON:0001353!1.29e-07!3;UBERON:0000163!1.29e-07!3;UBERON:0006866!1.29e-07!3;UBERON:0001046!1.29e-07!3;UBERON:0000164!1.29e-07!3;UBERON:0000931!1.29e-07!3;UBERON:0004122!2.65e-07!5;UBERON:0004921!2.98e-07!126;UBERON:0004185!2.98e-07!126;UBERON:0001007!4.95e-07!128;UBERON:0001555!4.95e-07!128;UBERON:0007026!4.95e-07!128;UBERON:0004119!8.08e-07!130;UBERON:0000925!8.08e-07!130;UBERON:0006595!8.08e-07!130 | |ontology_enrichment_uberon=UBERON:0005409!5.86e-18!59;UBERON:0000160!7.92e-10!43;UBERON:0000945!1.59e-09!16;UBERON:0010039!1.59e-09!16;UBERON:0000162!1.29e-07!3;UBERON:0001353!1.29e-07!3;UBERON:0000163!1.29e-07!3;UBERON:0006866!1.29e-07!3;UBERON:0001046!1.29e-07!3;UBERON:0000164!1.29e-07!3;UBERON:0000931!1.29e-07!3;UBERON:0004122!2.65e-07!5;UBERON:0004921!2.98e-07!126;UBERON:0004185!2.98e-07!126;UBERON:0001007!4.95e-07!128;UBERON:0001555!4.95e-07!128;UBERON:0007026!4.95e-07!128;UBERON:0004119!8.08e-07!130;UBERON:0000925!8.08e-07!130;UBERON:0006595!8.08e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,2.90e-13,16;UBERON:0010039,2.90e-13,16;UBERON:0001155,1.64e-12,2;UBERON:0010147,1.64e-12,2;UBERON:0003937,1.64e-12,2;UBERON:0005399,1.64e-12,2;UBERON:0000059,1.64e-12,2;UBERON:0005409,1.91e-11,47;UBERON:0000162,3.42e-09,3;UBERON:0001353,3.42e-09,3;UBERON:0000163,3.42e-09,3;UBERON:0006866,3.42e-09,3;UBERON:0001046,3.42e-09,3;UBERON:0000164,3.42e-09,3;UBERON:0000931,3.42e-09,3;UBERON:0001255,1.20e-07,1;UBERON:0001556,1.20e-07,1;UBERON:0002367,2.43e-07,1;UBERON:0009846,2.43e-07,1;UBERON:0003353,2.43e-07,1;UBERON:0004902,2.43e-07,1;UBERON:0003820,2.43e-07,1;UBERON:0009847,2.43e-07,1;UBERON:0001153,2.79e-07,1;UBERON:0001045,2.79e-07,1;UBERON:0006834,3.67e-07,1;UBERON:0000998,8.26e-07,1;UBERON:0007194,8.26e-07,1;UBERON:0006868,8.26e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,1.72910439899755,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.406638934253697,0.108005340821801,0.418176592028937,1.31017538247707,1.61837215661785,2.31429676030941,2.6175594198403,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4099929077341,1.68914227906064,0.549454872801795,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0.58489226135736,0.898819408654221,1.72910439899755,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0.307435147943927,0,0,0,1.58018378967908,0,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.406638934253697,0.108005340821801,0.418176592028937,1.31017538247707,1.61837215661785,2.31429676030941,2.6175594198403,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4099929077341,1.68914227906064,0.549454872801795,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Kdm1b | |short_description=p4@Kdm1b | ||
}} | }} |
Latest revision as of 16:13, 1 October 2015
Short description: | p4@Kdm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kdm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:95 |
Association with transcript: | -13bp_to_uc011yyy.1_5end |
EntrezGene: | Kdm1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stomach | 2.90e-13 | 16 |
food storage organ | 2.90e-13 | 16 |
colon | 1.64e-12 | 2 |
male accessory sex gland | 1.64e-12 | 2 |
sex gland | 1.64e-12 | 2 |
male reproductive gland | 1.64e-12 | 2 |
large intestine | 1.64e-12 | 2 |
gastrointestinal system | 1.91e-11 | 47 |
cloaca | 3.42e-09 | 3 |
anal region | 3.42e-09 | 3 |
embryonic cloaca | 3.42e-09 | 3 |
terminal part of digestive tract | 3.42e-09 | 3 |
hindgut | 3.42e-09 | 3 |
primitive urogenital sinus | 3.42e-09 | 3 |
proctodeum | 3.42e-09 | 3 |
urinary bladder | 1.20e-07 | 1 |
lower urinary tract | 1.20e-07 | 1 |
prostate gland | 2.43e-07 | 1 |
embryonic cloacal epithelium | 2.43e-07 | 1 |
epithelium of hindgut | 2.43e-07 | 1 |
urogenital sinus epithelium | 2.43e-07 | 1 |
prostate bud | 2.43e-07 | 1 |
prostate field | 2.43e-07 | 1 |
caecum | 2.79e-07 | 1 |
midgut | 2.79e-07 | 1 |
uterus or analog | 3.67e-07 | 1 |
seminal vesicle | 8.26e-07 | 1 |
vesicular gland | 8.26e-07 | 1 |
seminal fluid secreting gland | 8.26e-07 | 1 |