FFCP PHASE1:Mm9::chr8:125717843..125717889,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13479 | |EntrezGene=13479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009nuj.2_5end | |association_with_transcript=0bp_to_uc009nuj.2_5end | ||
|cluster_id=chr8:125717843..125717889,+ | |||
|description=CAGE_peak_1_at_Dpep1_5end | |description=CAGE_peak_1_at_Dpep1_5end | ||
|id=chr8:125717843..125717889,+ | |id=chr8:125717843..125717889,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.01e-09!9;CL:0002251!3.01e-09!9;CL:0000239!1.30e-07!6;CL:0000677!1.30e-07!6;CL:0000212!1.30e-07!6;CL:0000584!1.30e-07!6 | |ontology_enrichment_celltype=CL:0002563!3.01e-09!9;CL:0002251!3.01e-09!9;CL:0000239!1.30e-07!6;CL:0000677!1.30e-07!6;CL:0000212!1.30e-07!6;CL:0000584!1.30e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.05e-09,9;CL:0002251,6.05e-09,9;CL:0000239,8.87e-09,6;CL:0000677,8.87e-09,6;CL:0000584,8.87e-09,6;CL:0000075,2.33e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.22e-18!43;UBERON:0000344!3.05e-16!15;UBERON:0005409!4.42e-16!59;UBERON:0001242!4.85e-14!13;UBERON:0000060!4.85e-14!13;UBERON:0001262!4.85e-14!13;UBERON:0004786!4.85e-14!13;UBERON:0004923!2.94e-09!24;UBERON:0003350!3.01e-09!9;UBERON:0004808!3.01e-09!9;UBERON:0001277!3.01e-09!9;UBERON:0000485!3.93e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!3.22e-18!43;UBERON:0000344!3.05e-16!15;UBERON:0005409!4.42e-16!59;UBERON:0001242!4.85e-14!13;UBERON:0000060!4.85e-14!13;UBERON:0001262!4.85e-14!13;UBERON:0004786!4.85e-14!13;UBERON:0004923!2.94e-09!24;UBERON:0003350!3.01e-09!9;UBERON:0004808!3.01e-09!9;UBERON:0001277!3.01e-09!9;UBERON:0000485!3.93e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.84e-29,31;UBERON:0005409,7.07e-19,47;UBERON:0000344,4.13e-17,15;UBERON:0001242,1.62e-14,13;UBERON:0001262,1.62e-14,13;UBERON:0004786,1.62e-14,13;UBERON:0004923,4.20e-09,24;UBERON:0003350,6.05e-09,9;UBERON:0004808,6.05e-09,9;UBERON:0001277,6.05e-09,9;UBERON:0002108,3.68e-07,4;UBERON:0000485,5.40e-07,11 | |||
|phase1_expression=0,231.370695264896,232.049612088663,128.244825594096,140.250804384977,32.7364580228185,60.5056739142412,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3488311908182,0,0,169.751960583804,255.103120546693,273.908646882865,235.626811899014,216.548588849318,1095.29498974654,471.044312521311,298.227536831385,0,0,0,1.44425809875637,5.15327400611326,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2746636762055,0,0,0,0,0,0,0,0,0,0,38.8225191044804,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,184.527843605941,0,0,284.068245391954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,281.186384319212,318.398482262907,0,0,0.77320476793256,7.05892336181699,14.4545728499166,34.6210639524858,213.063548633486,25.1989400727737,6.03204501120647,9.15199771389294,8.57841983324129,205.829644581817,282.7085692361,242.155788277311,0,0.114248512609729,3.38123207019241,7.73875045812194,14.7403890247396,11.5022744620122,39.9022549254063,45.9067560216563,100.636184546321,85.0206459421206,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,7.23599220871019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,183.924407913436,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.209088296014469,1.74690050996942,0,0.165306911450672,0,99.2850695415133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,2.889207461421,0.618105171716683,1.92551525755089,2.02157769411038,1.52087579934144,0.943131706930381,1.49826411951812,1.92075457214608,1.32101578597911,0.952587382566147,1.27472758539341,1.35036454324594,1.23625770240992,1.47198920134397,2.74295401908332,0.70990322463735,1.43061713968393,2.18019624948493,1.41164070622996,1.94613598150856,2.37806364734604,1.05227884575137,2.03706170768793,1.68342681497322,1.66089025373844,2.1670986122624,1.22769312950907,2.32405261778949,1.54325288784913,0,2.57324769289949,3.00819475667618,0,0,0 | |phase1_expression=0,231.370695264896,232.049612088663,128.244825594096,140.250804384977,32.7364580228185,60.5056739142412,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3488311908182,0,0,169.751960583804,255.103120546693,273.908646882865,235.626811899014,216.548588849318,1095.29498974654,471.044312521311,298.227536831385,0,0,0,1.44425809875637,5.15327400611326,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2746636762055,0,0,0,0,0,0,0,0,0,0,38.8225191044804,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,184.527843605941,0,0,284.068245391954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,281.186384319212,318.398482262907,0,0,0.77320476793256,7.05892336181699,14.4545728499166,34.6210639524858,213.063548633486,25.1989400727737,6.03204501120647,9.15199771389294,8.57841983324129,205.829644581817,282.7085692361,242.155788277311,0,0.114248512609729,3.38123207019241,7.73875045812194,14.7403890247396,11.5022744620122,39.9022549254063,45.9067560216563,100.636184546321,85.0206459421206,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,7.23599220871019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,183.924407913436,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.209088296014469,1.74690050996942,0,0.165306911450672,0,99.2850695415133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,2.889207461421,0.618105171716683,1.92551525755089,2.02157769411038,1.52087579934144,0.943131706930381,1.49826411951812,1.92075457214608,1.32101578597911,0.952587382566147,1.27472758539341,1.35036454324594,1.23625770240992,1.47198920134397,2.74295401908332,0.70990322463735,1.43061713968393,2.18019624948493,1.41164070622996,1.94613598150856,2.37806364734604,1.05227884575137,2.03706170768793,1.68342681497322,1.66089025373844,2.1670986122624,1.22769312950907,2.32405261778949,1.54325288784913,0,2.57324769289949,3.00819475667618,0,0,0 | ||
|short_description=p1@Dpep1 | |short_description=p1@Dpep1 | ||
}} | }} |
Latest revision as of 16:40, 1 October 2015
Short description: | p1@Dpep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dpep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | 0bp_to_uc009nuj.2_5end |
EntrezGene: | Dpep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.05e-09 | 9 |
epithelial cell of alimentary canal | 6.05e-09 | 9 |
brush border epithelial cell | 8.87e-09 | 6 |
gut absorptive cell | 8.87e-09 | 6 |
enterocyte | 8.87e-09 | 6 |
columnar/cuboidal epithelial cell | 2.33e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.84e-29 | 31 |
gastrointestinal system | 7.07e-19 | 47 |
mucosa | 4.13e-17 | 15 |
intestinal mucosa | 1.62e-14 | 13 |
wall of intestine | 1.62e-14 | 13 |
gastrointestinal system mucosa | 1.62e-14 | 13 |
organ component layer | 4.20e-09 | 24 |
epithelium of mucosa | 6.05e-09 | 9 |
gastrointestinal system epithelium | 6.05e-09 | 9 |
intestinal epithelium | 6.05e-09 | 9 |
small intestine | 3.68e-07 | 4 |
simple columnar epithelium | 5.40e-07 | 11 |