Personal tools

FFCP PHASE1:Mm9::chrX:148450978..148451061,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=24061
|EntrezGene=24061
|HGNC=
|HGNC=
|MCL_coexpression_id=509
|TSSclassifier=NA
|UniProt=Q9CU62,A0JLM6
|UniProt=Q9CU62,A0JLM6
|association_with_transcript=7bp_to_ENSMUST00000045312,ENSMUST00000145518,NM_019710,uc009upw.1,uc009upx.2_5end
|association_with_transcript=7bp_to_ENSMUST00000045312,ENSMUST00000145518,NM_019710,uc009upw.1,uc009upx.2_5end
|cluster_id=chrX:148450978..148451061,+
|description=CAGE_peak_1_at_Smc1a_5end
|description=CAGE_peak_1_at_Smc1a_5end
|id=chrX:148450978..148451061,+
|id=chrX:148450978..148451061,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!5.14e-10!147;UBERON:0004177!1.74e-08!29;UBERON:0000926!1.36e-07!193;UBERON:0004120!1.36e-07!193;UBERON:0006603!1.36e-07!193;UBERON:0005057!2.26e-07!51;UBERON:0003081!2.67e-07!88;UBERON:0001041!5.51e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.15e-11,134;UBERON:0001041,4.02e-09,80;UBERON:0000153,1.59e-08,43;UBERON:0004177,1.74e-08,29;UBERON:0005057,1.74e-08,29;UBERON:0000077,3.07e-07,35;UBERON:0003081,7.04e-07,87
|phase1_expression=39.7169140819889,15.3549179361319,9.55498402718026,22.0798874253986,17.0304548181758,32.2328202070828,39.4805362606438,65.3364016614376,86.8666415675784,84.0291649495957,84.410458335174,78.017171497439,99.2964233600993,89.7807532843103,86.2754283102566,120.472784096946,135.015442478732,76.3418440166935,81.0346302609916,46.2584720459853,34.9527922520897,100.383151664095,103.435116499018,56.1573404004857,41.2936705920906,8.6134794617253,18.9535278309993,29.5195588779668,43.5153630555096,38.0565495937495,28.1597748532237,15.8757668364908,17.8368788399525,15.8481681015439,49.6824785972192,42.0573652756986,43.8964115964094,82.0321996244339,64.8508335954754,114.128176186288,64.7054636834116,67.6215030108861,80.5947186031715,73.6496385157127,64.5771051868308,50.8424503487858,3.9119567217402,4.79655344036982,4.61340983742391,11.2769341463084,5.73944328663986,5.75010257459886,58.3883469080923,64.5572306390096,92.0897009650351,45.0204013062907,46.1318838301398,25.2679325215947,19.2200637816618,14.2827564403449,10.1413024560989,1.69422266034566,2.66788438833342,5.84934816232909,8.89979726310277,3.5524005747305,4.79360176829448,9.60545763303886,38.2614669418283,22.9510095163874,27.3422449756797,8.2838785477103,6.18431914664518,33.9299513825423,21.7569219211397,22.9804696652505,40.7428759697738,43.9244443013046,43.6242554447731,15.1669230889723,18.5719916512892,20.8365348222704,12.0048689570594,39.3933827022176,45.839474333043,40.3641162098925,42.9962476013291,27.9599168737951,47.0259660599073,73.0021270631548,95.9451457602553,42.1607699720879,17.6792546764015,37.7792234146472,37.6870322119648,39.8743929516629,65.7279886216599,109.757127740269,62.0888551000856,60.0677276667578,30.5630220915397,29.5150898052931,17.8363667794652,14.2213340630666,44.3806634072989,41.5510179379162,36.3977600410644,55.7217333029013,293.89449793954,61.4550455728375,72.5168665882448,74.8985076647867,61.8049532646237,61.1933920643648,82.076917580722,57.1782990550023,47.4614338049998,124.066248237284,105.268655682035,77.9716216746512,99.8203663440979,105.702805183478,65.2371164263428,106.572210112203,74.7724743324035,54.6678098146386,115.741410272719,63.5896894853012,114.363204365758,71.5999256355053,69.0825910256126,52.774827887403,64.4888227913346,61.3717097592793,68.1544786155357,58.5690959674605,79.842061258648,90.1950536923174,53.0717792710717,81.6514400839519,113.07466493459,68.7407292256084,101.555041210217,117.399053094022,113.484880584415,135.928657222226,92.0150935176537,91.5809932416116,100.023548720839,124.053588590089,98.1807272834835,79.1296594063545,92.8677812413497,102.386136957517,100.627464703484,86.9779745996815,110.949683595491,112.461035409131,95.7630992963147,91.7567172332273,90.7615852126842,86.7899136242092,97.0653415899362,84.0183269561414,91.3261308293279,88.1303650604046,77.5310130044899,69.2418480237315,73.8873726111527,70.5920095540109,69.5570385903442,59.2109949072596,73.1101883919199,64.4190810049785,65.8207539005718,78.0016961834976,39.9806727410396,47.0722008661109,98.9657482483486,96.8426921658029,99.356812679334,87.9340167357773,74.9414007757213,67.7203228960711,51.7236677083518,58.3034299722999,51.7750530128555,68.0431134380736,67.2626100560964,71.0067332836835,66.1382432616564,59.7423819763102,19.9151296000736,99.7389515082933,112.70773567308,101.418361266966,84.7572368922525,80.5159212340857,71.8367061731563,66.1293462948618,58.0895293013087,47.2611137820496,53.0650202485997,125.467519498503,110.662714248733,121.650402800206,145.856427278334,112.629733604379,76.8970072379888,84.5826644105383,84.3103179230184,79.6228098245436,244.405951096503,82.2431494347393,73.9529285281509,68.9540336795615,66.7358378301513,54.9985614354239,94.2241269849684,72.5752107080957,139.823949787258,115.596403412903,110.539106943884,118.09191149648,88.3141907687111,62.2476336666378,125.635209852634,99.8805750315975,89.9324895228227,83.5702905050264,77.5355568577871,75.506808579549,70.871903451458,51.1271342789587,83.5999264132362,85.5403913544671,68.715652514775,68.8032600296233,67.8690673859436,56.8059586209839,68.4652836133277,73.7929226720647,83.584278320326,70.0178578000977,68.399192943295,65.956831673798,76.509222616555,65.4653121721339,71.5470878083208,82.2582570039826,81.1897287391296,70.5139790522331,79.9774970426058,82.9799718551853,54.4255067193848,84.2448807457786,69.232094544928,65.6345677550525,45.1811896107582,61.7944647367294,47.2923776497845,79.2503530260962,70.5864809201748,61.3111310395483,41.1132573442495,55.6931933540209,73.1945152370644,92.7314634261248,43.5938764347883,60.0143698088458,67.0346083167794,66.8883066007765,60.2249415403763,29.8375650132307,71.5748709594316,23.3015277950202,66.8201046106535,140.812860012024,111.087525566783,126.596829424199,89.4098856583492,93.0678901554497,69.9554007911642,72.8721436901303,108.161267545041,83.5866815251051,127.599029357731,170.850190503255,208.868779957726,116.905646508533,140.742140034912,161.08412162453,154.507570713346,58.2349076989219,100.594845958801,109.995831715625,95.9087426497595,89.4897906941926,84.0695870422784,91.8426198880629,75.1319912543304,54.4452359326782,57.2898181949724,69.5900030657357,5.6369293868419,87.3176628896836,58.2413886408984,76.2248658308667,73.1044600883958,87.1813607532415,85.5534269727546,64.0605573432235,52.6393909017068,23.6752438409486,19.298010419277,123.560348165618,71.1565505668476,96.6510106921024,124.853910881661,149.487290882347,145.236070345105,137.984376048924,139.123534598452,181.537677006769,156.68119448268,135.812871379324,143.750374091135,126.710995440314,99.9297513652414,61.4439339597223,60.6021652711197,63.6071243361183,57.9201926456071,78.4349751770693,65.1258189815601,76.9236821922513,66.0254607563523,62.1949409003851,75.1119950680698,67.667809766555,57.2895513439397,54.477458802949,45.2154463048624,43.0574521512129,51.9767325178491,67.0978592804088,66.6119341206781,68.8621214629921,87.4927340134609,111.726964552289,79.9033274929348,102.104821168684,68.3338910167222,48.5346862308037,77.1196145471605,71.2881298046574,82.1553176555047,75.5564663173755,77.3111864665231,72.9983941164115,76.8796776327735,78.9430129152038,79.0312052829239,84.7802770483871,69.6464798928582,74.0771406580627,67.170001830939,81.2538039141873,74.4026277676351,75.2497418115591,73.9152188836695,80.085875564413,76.0403793755871,67.3532278817745,78.4761003624194,85.2345865058611,73.4700255906112,101.566751170051,73.7909812732363,68.1651018038899,72.433894641035,70.4962627396145,67.1315006214372,54.7085165684102,79.5367468714389,65.3208004306827,65.994474563751,70.8098455373645,66.7779366586814
|phase1_expression=39.7169140819889,15.3549179361319,9.55498402718026,22.0798874253986,17.0304548181758,32.2328202070828,39.4805362606438,65.3364016614376,86.8666415675784,84.0291649495957,84.410458335174,78.017171497439,99.2964233600993,89.7807532843103,86.2754283102566,120.472784096946,135.015442478732,76.3418440166935,81.0346302609916,46.2584720459853,34.9527922520897,100.383151664095,103.435116499018,56.1573404004857,41.2936705920906,8.6134794617253,18.9535278309993,29.5195588779668,43.5153630555096,38.0565495937495,28.1597748532237,15.8757668364908,17.8368788399525,15.8481681015439,49.6824785972192,42.0573652756986,43.8964115964094,82.0321996244339,64.8508335954754,114.128176186288,64.7054636834116,67.6215030108861,80.5947186031715,73.6496385157127,64.5771051868308,50.8424503487858,3.9119567217402,4.79655344036982,4.61340983742391,11.2769341463084,5.73944328663986,5.75010257459886,58.3883469080923,64.5572306390096,92.0897009650351,45.0204013062907,46.1318838301398,25.2679325215947,19.2200637816618,14.2827564403449,10.1413024560989,1.69422266034566,2.66788438833342,5.84934816232909,8.89979726310277,3.5524005747305,4.79360176829448,9.60545763303886,38.2614669418283,22.9510095163874,27.3422449756797,8.2838785477103,6.18431914664518,33.9299513825423,21.7569219211397,22.9804696652505,40.7428759697738,43.9244443013046,43.6242554447731,15.1669230889723,18.5719916512892,20.8365348222704,12.0048689570594,39.3933827022176,45.839474333043,40.3641162098925,42.9962476013291,27.9599168737951,47.0259660599073,73.0021270631548,95.9451457602553,42.1607699720879,17.6792546764015,37.7792234146472,37.6870322119648,39.8743929516629,65.7279886216599,109.757127740269,62.0888551000856,60.0677276667578,30.5630220915397,29.5150898052931,17.8363667794652,14.2213340630666,44.3806634072989,41.5510179379162,36.3977600410644,55.7217333029013,293.89449793954,61.4550455728375,72.5168665882448,74.8985076647867,61.8049532646237,61.1933920643648,82.076917580722,57.1782990550023,47.4614338049998,124.066248237284,105.268655682035,77.9716216746512,99.8203663440979,105.702805183478,65.2371164263428,106.572210112203,74.7724743324035,54.6678098146386,115.741410272719,63.5896894853012,114.363204365758,71.5999256355053,69.0825910256126,52.774827887403,64.4888227913346,61.3717097592793,68.1544786155357,58.5690959674605,79.842061258648,90.1950536923174,53.0717792710717,81.6514400839519,113.07466493459,68.7407292256084,101.555041210217,117.399053094022,113.484880584415,135.928657222226,92.0150935176537,91.5809932416116,100.023548720839,124.053588590089,98.1807272834835,79.1296594063545,92.8677812413497,102.386136957517,100.627464703484,86.9779745996815,110.949683595491,112.461035409131,95.7630992963147,91.7567172332273,90.7615852126842,86.7899136242092,97.0653415899362,84.0183269561414,91.3261308293279,88.1303650604046,77.5310130044899,69.2418480237315,73.8873726111527,70.5920095540109,69.5570385903442,59.2109949072596,73.1101883919199,64.4190810049785,65.8207539005718,78.0016961834976,39.9806727410396,47.0722008661109,98.9657482483486,96.8426921658029,99.356812679334,87.9340167357773,74.9414007757213,67.7203228960711,51.7236677083518,58.3034299722999,51.7750530128555,68.0431134380736,67.2626100560964,71.0067332836835,66.1382432616564,59.7423819763102,19.9151296000736,99.7389515082933,112.70773567308,101.418361266966,84.7572368922525,80.5159212340857,71.8367061731563,66.1293462948618,58.0895293013087,47.2611137820496,53.0650202485997,125.467519498503,110.662714248733,121.650402800206,145.856427278334,112.629733604379,76.8970072379888,84.5826644105383,84.3103179230184,79.6228098245436,244.405951096503,82.2431494347393,73.9529285281509,68.9540336795615,66.7358378301513,54.9985614354239,94.2241269849684,72.5752107080957,139.823949787258,115.596403412903,110.539106943884,118.09191149648,88.3141907687111,62.2476336666378,125.635209852634,99.8805750315975,89.9324895228227,83.5702905050264,77.5355568577871,75.506808579549,70.871903451458,51.1271342789587,83.5999264132362,85.5403913544671,68.715652514775,68.8032600296233,67.8690673859436,56.8059586209839,68.4652836133277,73.7929226720647,83.584278320326,70.0178578000977,68.399192943295,65.956831673798,76.509222616555,65.4653121721339,71.5470878083208,82.2582570039826,81.1897287391296,70.5139790522331,79.9774970426058,82.9799718551853,54.4255067193848,84.2448807457786,69.232094544928,65.6345677550525,45.1811896107582,61.7944647367294,47.2923776497845,79.2503530260962,70.5864809201748,61.3111310395483,41.1132573442495,55.6931933540209,73.1945152370644,92.7314634261248,43.5938764347883,60.0143698088458,67.0346083167794,66.8883066007765,60.2249415403763,29.8375650132307,71.5748709594316,23.3015277950202,66.8201046106535,140.812860012024,111.087525566783,126.596829424199,89.4098856583492,93.0678901554497,69.9554007911642,72.8721436901303,108.161267545041,83.5866815251051,127.599029357731,170.850190503255,208.868779957726,116.905646508533,140.742140034912,161.08412162453,154.507570713346,58.2349076989219,100.594845958801,109.995831715625,95.9087426497595,89.4897906941926,84.0695870422784,91.8426198880629,75.1319912543304,54.4452359326782,57.2898181949724,69.5900030657357,5.6369293868419,87.3176628896836,58.2413886408984,76.2248658308667,73.1044600883958,87.1813607532415,85.5534269727546,64.0605573432235,52.6393909017068,23.6752438409486,19.298010419277,123.560348165618,71.1565505668476,96.6510106921024,124.853910881661,149.487290882347,145.236070345105,137.984376048924,139.123534598452,181.537677006769,156.68119448268,135.812871379324,143.750374091135,126.710995440314,99.9297513652414,61.4439339597223,60.6021652711197,63.6071243361183,57.9201926456071,78.4349751770693,65.1258189815601,76.9236821922513,66.0254607563523,62.1949409003851,75.1119950680698,67.667809766555,57.2895513439397,54.477458802949,45.2154463048624,43.0574521512129,51.9767325178491,67.0978592804088,66.6119341206781,68.8621214629921,87.4927340134609,111.726964552289,79.9033274929348,102.104821168684,68.3338910167222,48.5346862308037,77.1196145471605,71.2881298046574,82.1553176555047,75.5564663173755,77.3111864665231,72.9983941164115,76.8796776327735,78.9430129152038,79.0312052829239,84.7802770483871,69.6464798928582,74.0771406580627,67.170001830939,81.2538039141873,74.4026277676351,75.2497418115591,73.9152188836695,80.085875564413,76.0403793755871,67.3532278817745,78.4761003624194,85.2345865058611,73.4700255906112,101.566751170051,73.7909812732363,68.1651018038899,72.433894641035,70.4962627396145,67.1315006214372,54.7085165684102,79.5367468714389,65.3208004306827,65.994474563751,70.8098455373645,66.7779366586814
|short_description=p1@Smc1a
|short_description=p1@Smc1a
}}
}}

Latest revision as of 16:46, 1 October 2015

Short description:p1@Smc1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smc1a_5end
Coexpression cluster:MCL_coexpression_mm9:509
Association with transcript: 7bp_to_ENSMUST00000045312, ENSMUST00000145518, NM_019710, uc009upw.1, uc009upx.2_5end
EntrezGene:Smc1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smc1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I839.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E965.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E786.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F284.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E684.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F178.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E499.30
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E889.78
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A186.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3120.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5135.02
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A276.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A481.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A646.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2100.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9103.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D156.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.29
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I229.52
Ileum epithelium, pool1.CNhs13199.10252-104B943.52
Ileum epithelium, pool2.CNhs13232.10253-104C138.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F549.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F642.06
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F743.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G882.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H164.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3114.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G964.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H267.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H480.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D873.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D964.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B350.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A258.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I964.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A192.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.02
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E146.13
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C319.22
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D340.74
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.62
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.39
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F643.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.96
Mouse Schwann, donor1.CNhs12507.11728-123D947.03
Mouse Schwann, donor2.CNhs12573.11746-123F973.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G395.95
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F437.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F639.87
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A765.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7109.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E362.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I860.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.40
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B655.72
accessory axillary lymph node, adult.CNhs10475.1063-29H9293.89
adrenal gland, adult.CNhs10508.49-24D761.46
adrenal gland, embryo E14.CNhs11038.406-44C572.52
adrenal gland, embryo E16.CNhs11004.1254-43D674.90
adrenal gland, embryo E17.CNhs11043.1263-45I161.80
adrenal gland, embryo E18.CNhs11026.1262-18F561.19
adrenal gland, neonate N00.CNhs11191.1311-23C182.08
adrenal gland, neonate N25.CNhs11223.1377-27I357.18
amnion, adult pregnant day17.5.CNhs10488.583-22A847.46
aorta, adult.CNhs10498.46-23H1124.07
bone (os femoris), adult.CNhs10483.56-12G2105.27
bone (os femoris), neonate N02.CNhs11227.1985-43F577.97
bone (os femoris), neonate N16.CNhs11225.1525-43A699.82
bone (os femoris), neonate N20.CNhs11195.1350-25C3105.70
cecum, adult.CNhs10467.37-13H465.24
cerebellum, adult.CNhs10494.15-8B2106.57
cerebellum, neonate N30.CNhs11135.1395-42I274.77
colon, adult.CNhs10468.36-18H754.67
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7115.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D163.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4114.36
corpora quadrigemina, adult.CNhs10501.16-22A471.60
corpus striatum, adult.CNhs10487.19-21D869.08
corpus striatum, neonate N00.CNhs11226.630-43F152.77
cortex, adult.CNhs10473.12-14D564.49
cortex, neonate N30.CNhs11107.1392-42F261.37
diencephalon, adult.CNhs10482.20-12F268.15
diencephalon, neonate N30.CNhs11201.1388-42B258.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B179.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A290.20
epididymis, adult.CNhs10490.58-23B253.07
eyeball, adult.CNhs10484.31-12G481.65
eyeball, embryo E12.CNhs11016.345-16C6113.07
eyeball, embryo E14.CNhs10521.399-16E268.74
eyeball, embryo E15.CNhs10593.426-16C9101.56
eyeball, embryo E17.CNhs11023.1261-18D4117.40
eyeball, neonate N00.CNhs11207.633-15C6113.48
eyeball, neonate N01.CNhs11140.1532-43E7135.93
eyeball, neonate N02.CNhs11205.1551-44G892.02
eyeball, neonate N16.CNhs11188.777-19A291.58
forelimb, embryo E11.CNhs10596.335-25E2100.02
forelimb, embryo E12.CNhs10600.359-14H2124.05
forelimb, embryo E13.CNhs10589.384-1E298.18
forelimb, embryo E14.CNhs10577.413-26A879.13
forelimb, embryo E15.CNhs11007.437-20E792.87
forelimb, embryo E17.CNhs10598.1517-43C4102.39
forelimb, embryo E18.CNhs11008.1520-43B5100.63
gonad, embryo E13.CNhs11044.1564-45I686.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8110.95
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2112.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D595.76
heart, embryo E11.CNhs10586.331-24E991.76
heart, embryo E12.CNhs11015.353-12F590.76
heart, embryo E13.CNhs11013.376-3I986.79
heart, embryo E14.CNhs10597.403-26D497.07
heart, embryo E15.CNhs11017.431-16C884.02
heart, embryo E16.CNhs11021.457-17C691.33
heart, embryo E17.CNhs11025.479-18E588.13
heart, embryo E18.CNhs11030.1283-20G377.53
heart, neonate N00.CNhs11213.639-21E369.24
heart, neonate N03.CNhs11221.1349-25I273.89
heart, neonate N10.CNhs11118.749-24G170.59
heart, neonate N16.CNhs11209.782-15G169.56
heart, neonate N20.CNhs11127.821-26I659.21
heart, neonate N25.CNhs11196.1351-25D373.11
heart, neonate N30.CNhs11202.1390-42D264.42
hippocampus, adult.CNhs10478.13-16E865.82
hippocampus, neonate N00.CNhs11228.627-43G178.00
intestinal mucosa, adult.CNhs10506.860-29I339.98
intestine, adult.CNhs10496.178-9A347.07
intestine, embryo E12.CNhs11019.1251-16I598.97
intestine, embryo E13.CNhs11010.381-16D596.84
intestine, embryo E15.CNhs10602.976-16D899.36
intestine, embryo E16.CNhs10585.463-22H487.93
intestine, embryo E17.CNhs10582.482-18D374.94
intestine, embryo E18.CNhs10526.1289-20F767.72
intestine, neonate N00.CNhs11126.644-26D151.72
intestine, neonate N01.CNhs11192.1322-23E958.30
intestine, neonate N06.CNhs11102.688-20B851.78
intestine, neonate N07.CNhs11095.720-20F268.04
intestine, neonate N10.CNhs11098.755-23A567.26
intestine, neonate N20.CNhs11187.827-18D171.01
intestine, neonate N25.CNhs11121.1352-25E366.14
intestine, neonate N30.CNhs11131.1384-42G159.74
kidney, embryo E14.CNhs10606.411-4I919.92
kidney, embryo E15.CNhs10997.434-16F899.74
kidney, embryo E16.CNhs10584.464-22A5112.71
kidney, embryo E17.CNhs11028.483-18I2101.42
kidney, embryo E18.CNhs11001.1288-20C784.76
kidney, neonate N00.CNhs11214.646-21G780.52
kidney, neonate N10.CNhs11206.758-6D571.84
kidney, neonate N20.CNhs11113.832-19I166.13
kidney, neonate N25.CNhs11122.1353-25F358.09
kidney, neonate N30.CNhs11203.1385-42H147.26
liver, adult pregnant day01.CNhs10466.508-5B253.07
liver, embryo E12.CNhs10601.355-15F8125.47
liver, embryo E13.CNhs10524.378-3H6110.66
liver, embryo E14.CNhs10594.409-16E1121.65
liver, embryo E15.CNhs10520.433-16D7145.86
liver, embryo E16.CNhs10523.462-17F5112.63
liver, embryo E17.CNhs10510.481-18A376.90
liver, embryo E18.CNhs10579.499-43G484.58
liver, neonate N00.CNhs11117.641-24F484.31
liver, neonate N03.CNhs11123.1345-25G279.62
liver, neonate N06.CNhs11101.684-20A8244.41
liver, neonate N07.CNhs11103.716-20H282.24
liver, neonate N10.CNhs11115.751-24B973.95
liver, neonate N20.CNhs11220.823-25A368.95
liver, neonate N25.CNhs11198.1368-26H166.74
liver, neonate N30.CNhs11106.1382-42D155.00
lung, adult.CNhs10474.28-22B194.22
lung, embryo E12.CNhs10522.354-16G272.58
lung, embryo E14.CNhs10604.404-26F8139.82
lung, embryo E15.CNhs11020.432-17C5115.60
lung, embryo E16.CNhs10998.458-17B6110.54
lung, embryo E17.CNhs10605.480-44A6118.09
lung, embryo E18.CNhs10583.1287-20I688.31
lung, neonate N00.CNhs11224.640-42C662.25
lung, neonate N06.CNhs11212.683-20E5125.64
lung, neonate N07.CNhs11111.715-19A399.88
lung, neonate N10.CNhs11219.750-23E689.93
lung, neonate N20.CNhs11109.822-18A483.57
lung, neonate N25.CNhs11119.1359-25C777.54
lung, neonate N30.CNhs11133.1394-42H275.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A170.87
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A151.13
mammary gland, adult lactating day02.CNhs10480.595-22B683.60
mammary gland, adult pregnant day19.CNhs10476.588-5H285.54
medulla oblongata, adult.CNhs10477.17-12C268.72
medulla oblongata, neonate N30.CNhs11200.1396-42A368.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C767.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C256.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E168.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E273.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E383.58
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D770.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D868.40
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D476.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D565.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D671.55
olfactory brain, adult.CNhs10489.18-22I982.26
ovary, adult.CNhs10507.91-2I781.19
ovary, embryo E18.CNhs11040.505-44H770.51
ovary, neonate N00.CNhs11217.1299-22I479.98
oviduct, adult pregnant day01.CNhs10500.988-6G682.98
pancreas, adult.CNhs10486.34-16E454.43
pancreas, embryo E14.CNhs11012.405-44F484.24
pancreas, embryo E15.CNhs11042.1556-45F269.23
pancreas, embryo E16.CNhs11003.460-26E565.63
pancreas, embryo E17.CNhs10599.1558-45G345.18
pancreas, embryo E18.CNhs10580.1535-43I761.79
pancreas, neonate N00.CNhs11105.645-26G947.29
pancreas, neonate N01.CNhs11138.1531-43D779.25
pancreas, neonate N02.CNhs11139.1539-43D870.59
pancreas, neonate N16.CNhs11136.787-43B661.31
pancreas, neonate N25.CNhs11094.1555-45E241.11
pancreas, neonate N30.CNhs11182.1548-44H555.69
pituitary gland, adult.CNhs10493.21-1G873.19
pituitary gland, embryo E12.CNhs11018.346-16E692.73
pituitary gland, embryo E13.CNhs11009.370-44C743.59
pituitary gland, embryo E14.CNhs11037.398-44A560.01
pituitary gland, embryo E15.CNhs10592.427-16B967.03
pituitary gland, embryo E16.CNhs11036.449-43F666.89
pituitary gland, embryo E17.CNhs11039.1265-44F560.22
pituitary gland, neonate N00.CNhs11190.1308-22E929.84
placenta, adult pregnant day10.CNhs10472.539-13I771.57
placenta, adult pregnant day17.CNhs10464.577-18G323.30
prostate, adult.CNhs10470.859-1F866.82
skin, adult.CNhs10492.30-1C3140.81
skin, neonate N00.CNhs11124.650-25G4111.09
skin, neonate N03.CNhs11215.662-22H3126.60
skin, neonate N06.CNhs11097.693-20I589.41
skin, neonate N10.CNhs11108.762-6C493.07
small intestine, neonate N16.CNhs11114.790-21I169.96
spinal cord, adult.CNhs10505.24-13C972.87
spleen, adult.CNhs10465.25-2G2108.16
spleen, embryo E16.CNhs11035.461-43C183.59
spleen, embryo E18.CNhs11011.1271-21F2127.60
spleen, neonate N10.CNhs11116.752-24D1170.85
spleen, neonate N20.CNhs11112.824-19H1208.87
spleen, neonate N25.CNhs11099.1354-25G3116.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6140.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9161.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3154.51
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E3100.59
stomach, embryo E15.CNhs10603.1252-16G8110.00
stomach, embryo E16.CNhs11022.459-17D495.91
stomach, embryo E17.CNhs11006.1035-18D589.49
stomach, embryo E18.CNhs10999.1286-20C684.07
stomach, neonate N03.CNhs11193.1340-24B891.84
stomach, neonate N07.CNhs11210.718-18A975.13
stomach, neonate N25.CNhs11104.1355-25E454.45
stomach, neonate N30.CNhs11134.1386-42I157.29
submandibular gland, adult.CNhs10469.59-29C169.59
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F587.32
testis, embryo E15.CNhs11034.443-27C558.24
testis, embryo E16.CNhs11033.470-26G576.22
testis, embryo E17.CNhs11029.486-18I573.10
testis, embryo E18.CNhs11027.503-18G587.18
testis, neonate N00.CNhs11189.1300-22B785.55
testis, neonate N07.CNhs11222.726-26I464.06
testis, neonate N10.CNhs11204.763-44D952.64
testis, neonate N20.CNhs11110.839-18H323.68
testis, neonate N30.CNhs11130.1391-42E219.30
thymus, adult.CNhs10471.38-12B5123.56
thymus, embryo E14.CNhs11041.402-44I471.16
thymus, embryo E15.CNhs11005.430-45I296.65
thymus, embryo E16.CNhs11002.456-26C5124.85
thymus, embryo E17.CNhs10581.478-18C1149.49
thymus, embryo E18.CNhs10595.1273-19G4145.24
thymus, neonate N02.CNhs11181.1541-43F8137.98
thymus, neonate N03.CNhs11137.2104-43C7139.12
thymus, neonate N06.CNhs11197.681-26C4181.54
thymus, neonate N07.CNhs11211.713-19D3156.68
thymus, neonate N10.CNhs11194.748-24E4135.81
thymus, neonate N20.CNhs11186.820-7A2143.75
thymus, neonate N25.CNhs11125.1362-25G7126.71
thymus, neonate N30.CNhs11132.1393-42G299.93
tongue, adult.CNhs10499.32-1B461.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H360.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F763.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G557.92
urinary bladder, adult.CNhs10481.879-12E478.43
uterus, adult pregnant day19.CNhs10497.590-15F565.13
uterus, adult.CNhs10509.92-27E576.92
vagina, adult.CNhs10502.89-27D566.03
vesicular gland, adult.CNhs10491.51-27F862.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A267.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A357.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A767.10
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A866.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A968.86
whole body, embryo E11.CNhs11014.324-5I887.49
whole body, embryo E12.CNhs10587.857-27C9111.73
whole body, embryo E13.CNhs10512.372-23H279.90
whole body, embryo E14.5.CNhs10578.420-27D2102.10
whole body, embryo E14.CNhs10519.395-14B168.33
whole body, embryo E16.CNhs10514.453-14F248.53
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G577.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G571.29
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G582.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G575.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G577.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G573.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G576.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G578.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G579.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G584.78
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G569.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G574.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G567.17
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G581.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G574.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G575.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G573.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G580.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G576.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G567.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G578.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G585.23
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G573.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5101.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G573.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G568.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G572.43
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G570.50
whole body, embryo E17.5.CNhs10513.490-9F967.13
whole body, embryo E17.CNhs10517.475-3I554.71
whole body, embryo E18.CNhs10516.493-3B379.54
whole body, neonate N00.CNhs10525.657-19C265.32
whole body, neonate N01.CNhs10576.659-23C665.99
whole body, neonate N06.CNhs10515.692-21D170.81
whole body, neonate N10.CNhs10518.761-6B466.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium2.15e-11134
foregut4.02e-0980
anterior region of body1.59e-0843
hemopoietic organ1.74e-0829
immune organ1.74e-0829
mixed endoderm/mesoderm-derived structure3.07e-0735
lateral plate mesoderm7.04e-0787
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:148450978..148451061,%2B&oldid=4312346"