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FFCP PHASE1:Mm9::chr16:17797400..17797418,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=224024
|EntrezGene=224024
|HGNC=
|HGNC=
|MCL_coexpression_id=1690
|TSSclassifier=NA
|UniProt=P59222,Q58A84
|UniProt=P59222,Q58A84
|association_with_transcript=25bp_to_ENSMUST00000012161,NM_153790,uc007ymd.1,uc007yme.1_5end
|association_with_transcript=25bp_to_ENSMUST00000012161,NM_153790,uc007ymd.1,uc007yme.1_5end
|cluster_id=chr16:17797400..17797418,+
|description=CAGE_peak_1_at_Scarf2_5end
|description=CAGE_peak_1_at_Scarf2_5end
|id=chr16:17797400..17797418,+
|id=chr16:17797400..17797418,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!5.90e-09!14;UBERON:0000117!5.90e-09!14;UBERON:0000171!5.90e-09!14;UBERON:0000170!5.90e-09!14;UBERON:0005597!5.90e-09!14;UBERON:0000118!5.90e-09!14;UBERON:0000468!3.61e-07!333;UBERON:0000464!8.31e-07!57;UBERON:0005153!9.34e-07!17
|ontology_enrichment_uberon=UBERON:0002048!5.90e-09!14;UBERON:0000117!5.90e-09!14;UBERON:0000171!5.90e-09!14;UBERON:0000170!5.90e-09!14;UBERON:0005597!5.90e-09!14;UBERON:0000118!5.90e-09!14;UBERON:0000468!3.61e-07!333;UBERON:0000464!8.31e-07!57;UBERON:0005153!9.34e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.85e-09,14;UBERON:0000117,4.85e-09,14;UBERON:0000171,4.85e-09,14;UBERON:0000170,4.85e-09,14;UBERON:0005597,4.85e-09,14;UBERON:0000118,4.85e-09,14;UBERON:0005153,8.13e-07,17
|phase1_expression=32.1899182680636,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0,0,0,7.39876624314307,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6757763232131,33.9612719585374,34.3232426542344,108.752396864377,5.01457859675027,10.9843091367236,8.36048566019419,21.4179225086805,12.9377307928474,0,0,0,35.7590616089966,53.2952198286088,55.1769138736863,1.01158230429799,0,1.26766280701236,32.8679196107058,22.2323699027785,1.3498495759221,0,0,15.8788058574755,9.60545763303886,1.45165457231869,1.08004750665353,1.89292465216244,1.71390590642282,3.97563373712904,0.244981598429908,0.479227355091182,0.919218786610021,0,0.638436690425939,0.614426133024974,0.923204014111357,0.914876436024097,2.6045668527838,1.67509799400829,2.25105044012672,1.98637722109853,3.24091444021034,3.27454865837937,1.86399445825301,1.21161909333094,0.982430281388212,11.3047150593654,19.7897491705719,0.679971333707751,0.539703191637817,0,0,3.37066608316204,28.2914335479576,26.4981724694926,31.4472221314203,9.57735254481427,69.2962978037316,117.210410265057,106.660005473,0.649473123033642,0.253359865475099,0.505524445014783,2.96878087269556,0.776813650941515,13.2113503767694,17.0015620230813,9.43842982767638,10.6083128737787,7.83757730873637,16.5800077061344,7.41432888845085,21.0115722574218,7.08536848907567,3.5384422077995,43.5152826358531,17.0047969214503,16.9706338597328,5.59175283654366,0.878342391034642,0.83778682725382,4.34276993854605,0,0,0,1.3481157546434,0.457500602818626,0.376963056338593,1.04294592115366,0.767146371990992,0.62336413367868,1.46017136760982,76.1758441600366,18.9098595327341,5.30717792710717,4.41927897361595,16.9156575851515,20.0014830857121,17.1059023315082,15.2211866014072,24.9693951885373,14.6049641124729,16.9600121453109,10.6068382002996,24.7903191872769,39.9013829154099,54.7207996149881,55.8949117690316,44.7656071253213,51.1930684787585,38.2754773718775,33.2387225586884,0,0,0,17.3985648929822,15.9477720787145,11.3439098720439,11.6004920436753,11.8058539048442,11.5700334665534,10.2314935690179,11.267482858784,11.6765342367169,16.1268652915211,10.8350526292203,10.9442892886905,10.3801991071986,8.34290438105992,9.5286557319864,0.420579897128254,3.2929475961371,0.660837565967596,2.11560453330835,25.3813018136928,22.9914305141834,19.4589866596361,20.9750865608276,19.1245117706588,10.0819581839656,6.64340686162316,10.8701310117847,13.5721012752146,18.3039954277859,11.8928093142663,9.88701349519644,4.97117514711797,3.78368419183298,12.1387456609972,15.6520462275328,24.7957018480777,12.6263823264095,16.8738663835834,31.0000323915208,22.7019168276084,10.3327103585722,11.6179058602617,12.7099078839455,3.26097889795864,5.33904338291501,4.52085688760367,2.47348323623339,3.24576194221605,5.30589751455317,7.63877555344259,7.48009957372108,4.86405680325106,5.21666685057355,11.5014565221884,13.0249331683976,11.2333562321242,6.31447194867779,3.58794827043824,5.78932225636041,38.0591571743206,32.5925228245234,29.3336957595647,24.2735472658519,31.2138030223708,37.1863891520831,37.8489389008762,57.9546934137663,61.9506116337331,61.5671837223594,85.1488464630981,42.7683251408076,42.4805055390103,42.0928760472199,0,0,2.45882136509518,4.69092468718045,0.642202359951168,0.937693492737625,14.4262751931474,10.856249869788,11.042787679569,11.3227235846025,11.6328634775711,16.4888470587261,14.0363164671908,14.4369030702305,14.9779959619711,11.6902343164525,9.09161889277004,0.963963949265421,13.0584878391607,48.7899754048279,77.6970796116558,41.5724709890789,1.32745138339963,17.7229864393136,19.3487076457441,9.6188590675508,12.4026795009925,17.2163682848599,20.4158351602895,16.3590178264877,17.1118741624666,8.21695570633122,8.4334886859999,6.18813259489121,4.08527526904546,16.3855595568492,17.3340636268891,20.5763553630329,16.1379612614469,25.5067409170961,22.5432158224906,30.7509598605745,3.28540391289194,3.38931313382112,3.08739757276947,7.91454014119104,27.9333458183917,18.2748162532312,15.5184047204077,12.3105674808796,13.9910801582328,0.556275906031529,3.93003025835061,37.9751837052329,20.1862034832986,6.02779062415011,4.23752105935178,4.34678529092393,0,0,0,4.77335309007557,31.6335993581135,26.6348501936172,19.8729827112114,21.9542710815192,18.3424553546789,25.7590901595008,33.1440357458597,14.1348208671376,5.31421390496351,4.34937519160848,0,23.4740977289047,20.1859358357659,32.8622508301441,28.5443209885786,22.8090769412551,33.4468130140399,28.9053734353569,11.953965264531,3.8653459332161,4.60848010012585,3.16011120628178,12.5689633479902,8.21687657318618,4.67714962720062,5.37080087002444,3.77494574084403,5.64918612743854,5.61220203263393,2.62512769865184,4.26758117267999,3.52891647978942,2.53390489923356,3.36741445741153,3.50630706544707,5.44152920676507,11.0992976687032,13.9056477744687,8.22634620183984,13.5232715822533,11.6363134779733,30.7694728769005,8.36036678408357,4.01257683228291,0,0.460325236507177,1.14579102687879,0.343706364687375,1.37016503954128,0,0,0.45032120322422,0.906284817968409,0.51776031175182,6.84996494055566,27.9317411380722,23.7319711998246,25.0399918580343,9.4325923182592,12.1336715577009,18.4464784075341,16.0707344646337,20.2179102042844,20.7211713646314,19.2644267916582,17.5422497489051,18.0728109416873,22.024652427275,19.2983175690861,26.1961530205691,20.2797570403497,24.6923802193542,11.9504911232959,19.283058537606,16.4577241144999,17.2151531974557,20.028639955575,20.784537578423,20.4217355501267,19.3767452071939,21.2196448532416,14.7319038405192,17.7903389138079,29.7405403978601,23.0151935160898,22.0650040521262,19.6430900721451,19.9868525129896,28.3572718142278,25.9803001055464,28.3057246218944,29.6522054586652,44.5701813720405,35.956401316481,22.4911800551809
|phase1_expression=32.1899182680636,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0,0,0,7.39876624314307,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6757763232131,33.9612719585374,34.3232426542344,108.752396864377,5.01457859675027,10.9843091367236,8.36048566019419,21.4179225086805,12.9377307928474,0,0,0,35.7590616089966,53.2952198286088,55.1769138736863,1.01158230429799,0,1.26766280701236,32.8679196107058,22.2323699027785,1.3498495759221,0,0,15.8788058574755,9.60545763303886,1.45165457231869,1.08004750665353,1.89292465216244,1.71390590642282,3.97563373712904,0.244981598429908,0.479227355091182,0.919218786610021,0,0.638436690425939,0.614426133024974,0.923204014111357,0.914876436024097,2.6045668527838,1.67509799400829,2.25105044012672,1.98637722109853,3.24091444021034,3.27454865837937,1.86399445825301,1.21161909333094,0.982430281388212,11.3047150593654,19.7897491705719,0.679971333707751,0.539703191637817,0,0,3.37066608316204,28.2914335479576,26.4981724694926,31.4472221314203,9.57735254481427,69.2962978037316,117.210410265057,106.660005473,0.649473123033642,0.253359865475099,0.505524445014783,2.96878087269556,0.776813650941515,13.2113503767694,17.0015620230813,9.43842982767638,10.6083128737787,7.83757730873637,16.5800077061344,7.41432888845085,21.0115722574218,7.08536848907567,3.5384422077995,43.5152826358531,17.0047969214503,16.9706338597328,5.59175283654366,0.878342391034642,0.83778682725382,4.34276993854605,0,0,0,1.3481157546434,0.457500602818626,0.376963056338593,1.04294592115366,0.767146371990992,0.62336413367868,1.46017136760982,76.1758441600366,18.9098595327341,5.30717792710717,4.41927897361595,16.9156575851515,20.0014830857121,17.1059023315082,15.2211866014072,24.9693951885373,14.6049641124729,16.9600121453109,10.6068382002996,24.7903191872769,39.9013829154099,54.7207996149881,55.8949117690316,44.7656071253213,51.1930684787585,38.2754773718775,33.2387225586884,0,0,0,17.3985648929822,15.9477720787145,11.3439098720439,11.6004920436753,11.8058539048442,11.5700334665534,10.2314935690179,11.267482858784,11.6765342367169,16.1268652915211,10.8350526292203,10.9442892886905,10.3801991071986,8.34290438105992,9.5286557319864,0.420579897128254,3.2929475961371,0.660837565967596,2.11560453330835,25.3813018136928,22.9914305141834,19.4589866596361,20.9750865608276,19.1245117706588,10.0819581839656,6.64340686162316,10.8701310117847,13.5721012752146,18.3039954277859,11.8928093142663,9.88701349519644,4.97117514711797,3.78368419183298,12.1387456609972,15.6520462275328,24.7957018480777,12.6263823264095,16.8738663835834,31.0000323915208,22.7019168276084,10.3327103585722,11.6179058602617,12.7099078839455,3.26097889795864,5.33904338291501,4.52085688760367,2.47348323623339,3.24576194221605,5.30589751455317,7.63877555344259,7.48009957372108,4.86405680325106,5.21666685057355,11.5014565221884,13.0249331683976,11.2333562321242,6.31447194867779,3.58794827043824,5.78932225636041,38.0591571743206,32.5925228245234,29.3336957595647,24.2735472658519,31.2138030223708,37.1863891520831,37.8489389008762,57.9546934137663,61.9506116337331,61.5671837223594,85.1488464630981,42.7683251408076,42.4805055390103,42.0928760472199,0,0,2.45882136509518,4.69092468718045,0.642202359951168,0.937693492737625,14.4262751931474,10.856249869788,11.042787679569,11.3227235846025,11.6328634775711,16.4888470587261,14.0363164671908,14.4369030702305,14.9779959619711,11.6902343164525,9.09161889277004,0.963963949265421,13.0584878391607,48.7899754048279,77.6970796116558,41.5724709890789,1.32745138339963,17.7229864393136,19.3487076457441,9.6188590675508,12.4026795009925,17.2163682848599,20.4158351602895,16.3590178264877,17.1118741624666,8.21695570633122,8.4334886859999,6.18813259489121,4.08527526904546,16.3855595568492,17.3340636268891,20.5763553630329,16.1379612614469,25.5067409170961,22.5432158224906,30.7509598605745,3.28540391289194,3.38931313382112,3.08739757276947,7.91454014119104,27.9333458183917,18.2748162532312,15.5184047204077,12.3105674808796,13.9910801582328,0.556275906031529,3.93003025835061,37.9751837052329,20.1862034832986,6.02779062415011,4.23752105935178,4.34678529092393,0,0,0,4.77335309007557,31.6335993581135,26.6348501936172,19.8729827112114,21.9542710815192,18.3424553546789,25.7590901595008,33.1440357458597,14.1348208671376,5.31421390496351,4.34937519160848,0,23.4740977289047,20.1859358357659,32.8622508301441,28.5443209885786,22.8090769412551,33.4468130140399,28.9053734353569,11.953965264531,3.8653459332161,4.60848010012585,3.16011120628178,12.5689633479902,8.21687657318618,4.67714962720062,5.37080087002444,3.77494574084403,5.64918612743854,5.61220203263393,2.62512769865184,4.26758117267999,3.52891647978942,2.53390489923356,3.36741445741153,3.50630706544707,5.44152920676507,11.0992976687032,13.9056477744687,8.22634620183984,13.5232715822533,11.6363134779733,30.7694728769005,8.36036678408357,4.01257683228291,0,0.460325236507177,1.14579102687879,0.343706364687375,1.3701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|short_description=p1@Scarf2
|short_description=p1@Scarf2
}}
}}

Latest revision as of 16:51, 1 October 2015

Short description:p1@Scarf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scarf2_5end
Coexpression cluster:MCL_coexpression_mm9:1690
Association with transcript: 25bp_to_ENSMUST00000012161, NM_153790, uc007ymd.1, uc007yme.1_5end
EntrezGene:Scarf2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scarf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D933.96
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7108.75
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C135.76
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E153.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C555.18
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C632.87
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C815.88
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I831.45
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H169.30
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8117.21
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6106.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D713.21
adrenal gland, embryo E14.CNhs11038.406-44C517.00
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C116.58
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A821.01
aorta, adult.CNhs10498.46-23H17.09
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F543.52
bone (os femoris), neonate N16.CNhs11225.1525-43A617.00
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B176.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.91
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C616.92
eyeball, embryo E14.CNhs10521.399-16E220.00
eyeball, embryo E15.CNhs10593.426-16C917.11
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C624.97
eyeball, neonate N01.CNhs11140.1532-43E714.60
eyeball, neonate N02.CNhs11205.1551-44G816.96
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E224.79
forelimb, embryo E12.CNhs10600.359-14H239.90
forelimb, embryo E13.CNhs10589.384-1E254.72
forelimb, embryo E14.CNhs10577.413-26A855.89
forelimb, embryo E15.CNhs11007.437-20E744.77
forelimb, embryo E17.CNhs10598.1517-43C451.19
forelimb, embryo E18.CNhs11008.1520-43B538.28
gonad, embryo E13.CNhs11044.1564-45I633.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E917.40
heart, embryo E12.CNhs11015.353-12F515.95
heart, embryo E13.CNhs11013.376-3I911.34
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C611.57
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E311.68
heart, neonate N03.CNhs11221.1349-25I216.13
heart, neonate N10.CNhs11118.749-24G110.84
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I525.38
intestine, embryo E13.CNhs11010.381-16D522.99
intestine, embryo E15.CNhs10602.976-16D819.46
intestine, embryo E16.CNhs10585.463-22H420.98
intestine, embryo E17.CNhs10582.482-18D319.12
intestine, embryo E18.CNhs10526.1289-20F710.08
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B813.57
intestine, neonate N07.CNhs11095.720-20F218.30
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I912.14
kidney, embryo E15.CNhs10997.434-16F815.65
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I212.63
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G731.00
kidney, neonate N10.CNhs11206.758-6D522.70
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F311.62
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B138.06
lung, embryo E12.CNhs10522.354-16G232.59
lung, embryo E14.CNhs10604.404-26F829.33
lung, embryo E15.CNhs11020.432-17C524.27
lung, embryo E16.CNhs10998.458-17B631.21
lung, embryo E17.CNhs10605.480-44A637.19
lung, embryo E18.CNhs10583.1287-20I637.85
lung, neonate N00.CNhs11224.640-42C657.95
lung, neonate N06.CNhs11212.683-20E561.95
lung, neonate N07.CNhs11111.715-19A361.57
lung, neonate N10.CNhs11219.750-23E685.15
lung, neonate N20.CNhs11109.822-18A442.77
lung, neonate N25.CNhs11119.1359-25C742.48
lung, neonate N30.CNhs11133.1394-42H242.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I713.06
ovary, embryo E18.CNhs11040.505-44H748.79
ovary, neonate N00.CNhs11217.1299-22I477.70
oviduct, adult pregnant day01.CNhs10500.988-6G641.57
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F219.35
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C717.33
pituitary gland, embryo E14.CNhs11037.398-44A520.58
pituitary gland, embryo E15.CNhs10592.427-16B916.14
pituitary gland, embryo E16.CNhs11036.449-43F625.51
pituitary gland, embryo E17.CNhs11039.1265-44F522.54
pituitary gland, neonate N00.CNhs11190.1308-22E930.75
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G427.93
skin, neonate N03.CNhs11215.662-22H318.27
skin, neonate N06.CNhs11097.693-20I515.52
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C137.98
spleen, embryo E18.CNhs11011.1271-21F220.19
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E331.63
stomach, embryo E15.CNhs10603.1252-16G826.63
stomach, embryo E16.CNhs11022.459-17D419.87
stomach, embryo E17.CNhs11006.1035-18D521.95
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B825.76
stomach, neonate N07.CNhs11210.718-18A933.14
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F523.47
testis, embryo E15.CNhs11034.443-27C520.19
testis, embryo E16.CNhs11033.470-26G532.86
testis, embryo E17.CNhs11029.486-18I528.54
testis, embryo E18.CNhs11027.503-18G522.81
testis, neonate N00.CNhs11189.1300-22B733.45
testis, neonate N07.CNhs11222.726-26I428.91
testis, neonate N10.CNhs11204.763-44D911.95
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I412.57
thymus, embryo E15.CNhs11005.430-45I28.22
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G73.37
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E413.52
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E530.77
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I86.85
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H223.73
whole body, embryo E14.5.CNhs10578.420-27D225.04
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F212.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.99
whole body, embryo E17.5.CNhs10513.490-9F928.36
whole body, embryo E17.CNhs10517.475-3I525.98
whole body, embryo E18.CNhs10516.493-3B328.31
whole body, neonate N00.CNhs10525.657-19C229.65
whole body, neonate N01.CNhs10576.659-23C644.57
whole body, neonate N06.CNhs10515.692-21D135.96
whole body, neonate N10.CNhs10518.761-6B422.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung4.85e-0914
respiratory tube4.85e-0914
respiration organ4.85e-0914
pair of lungs4.85e-0914
lung primordium4.85e-0914
lung bud4.85e-0914
epithelial bud8.13e-0717
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