FFCP PHASE1:Mm9::chr18:73975357..73975368,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:73975357..73975368,- to FFCP PHASE1:Mm9::chr18:73975357..73975368,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107029 | |EntrezGene=107029 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=781 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KE1,Q3V2Y4 | |UniProt=Q99KE1,Q3V2Y4 | ||
|association_with_transcript=-311bp_to_ENSMUST00000025439,NM_145494,uc008fox.1,uc008foy.1,uc012beu.1_5end | |||
|cluster_id=chr18:73975357..73975368,- | |||
|description=CAGE_peak_3_at_Me2_5end | |||
|id=chr18:73975357..73975368,- | |||
|ontology_enrichment_celltype=CL:0000239!3.71e-12!6;CL:0000677!3.71e-12!6;CL:0000212!3.71e-12!6;CL:0000584!3.71e-12!6;CL:0002563!1.59e-10!9;CL:0002251!1.59e-10!9;CL:0000075!2.76e-10!7;CL:0000066!1.26e-07!25;CL:0000473!6.08e-07!3;CL:0000627!6.08e-07!3;CL:0000682!6.08e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.37e-20,6;CL:0000677,3.37e-20,6;CL:0000584,3.37e-20,6;CL:0000075,2.28e-17,7;CL:0002563,1.39e-13,9;CL:0002251,1.39e-13,9;CL:0002076,2.94e-08,15;CL:0000066,2.01e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.59e-20!15;UBERON:0001242!2.35e-17!13;UBERON:0000060!2.35e-17!13;UBERON:0001262!2.35e-17!13;UBERON:0004786!2.35e-17!13;UBERON:0004923!3.26e-17!24;UBERON:0000160!1.76e-12!43;UBERON:0005409!1.00e-10!59;UBERON:0003350!1.59e-10!9;UBERON:0004808!1.59e-10!9;UBERON:0001277!1.59e-10!9;UBERON:0000485!2.24e-08!11;UBERON:0000331!4.05e-07!3;UBERON:0002116!4.05e-07!3;UBERON:0001204!4.05e-07!3;UBERON:0001168!4.05e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.97e-28,31;UBERON:0001242,1.51e-20,13;UBERON:0001262,1.51e-20,13;UBERON:0004786,1.51e-20,13;UBERON:0005409,4.38e-18,47;UBERON:0000344,8.65e-18,15;UBERON:0003350,1.39e-13,9;UBERON:0004808,1.39e-13,9;UBERON:0001277,1.39e-13,9;UBERON:0000485,3.61e-11,11;UBERON:0000331,4.61e-11,3;UBERON:0002116,4.61e-11,3;UBERON:0001204,4.61e-11,3;UBERON:0001168,4.61e-11,3;UBERON:0004923,4.81e-11,24;UBERON:0002108,1.61e-08,4;UBERON:0004921,7.16e-07,114;UBERON:0001007,9.83e-07,116;UBERON:0001555,9.83e-07,116;UBERON:0007026,9.83e-07,116 | |||
|phase1_expression=0,1.74487703819681,2.27499619694768,3.32710632437513,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,1.50829862880122,1.90023419456374,5.79669298447841,0.443461021310609,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0.232236671860439,0,0.201683524623343,0,0,1.42358718463353,0,0,0,0,1.79763881730844,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.516639293910924,0,0,0,0.314578033277133,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,2.27499619694768,3.32710632437513,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,1.50829862880122,1.90023419456374,5.79669298447841,0.443461021310609,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57639877292028,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.05780226665418,0,0.232236671860439,0,0.201683524623343,0,0,1.42358718463353,0,0,0,0,1.79763881730844,0.432276099749388,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.516639293910924,0,0,0,0.314578033277133,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Me2 | |||
}} | }} |
Latest revision as of 17:13, 1 October 2015
Short description: | p3@Me2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Me2_5end |
Coexpression cluster: | MCL_coexpression_mm9:781 |
Association with transcript: | -311bp_to_ENSMUST00000025439, NM_145494, uc008fox.1, uc008foy.1, uc012beu.1_5end |
EntrezGene: | Me2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.37e-20 | 6 |
gut absorptive cell | 3.37e-20 | 6 |
enterocyte | 3.37e-20 | 6 |
columnar/cuboidal epithelial cell | 2.28e-17 | 7 |
intestinal epithelial cell | 1.39e-13 | 9 |
epithelial cell of alimentary canal | 1.39e-13 | 9 |
endo-epithelial cell | 2.94e-08 | 15 |
epithelial cell | 2.01e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.97e-28 | 31 |
intestinal mucosa | 1.51e-20 | 13 |
wall of intestine | 1.51e-20 | 13 |
gastrointestinal system mucosa | 1.51e-20 | 13 |
gastrointestinal system | 4.38e-18 | 47 |
mucosa | 8.65e-18 | 15 |
epithelium of mucosa | 1.39e-13 | 9 |
gastrointestinal system epithelium | 1.39e-13 | 9 |
intestinal epithelium | 1.39e-13 | 9 |
simple columnar epithelium | 3.61e-11 | 11 |
ileal mucosa | 4.61e-11 | 3 |
ileum | 4.61e-11 | 3 |
mucosa of small intestine | 4.61e-11 | 3 |
wall of small intestine | 4.61e-11 | 3 |
organ component layer | 4.81e-11 | 24 |
small intestine | 1.61e-08 | 4 |
subdivision of digestive tract | 7.16e-07 | 114 |
digestive system | 9.83e-07 | 116 |
digestive tract | 9.83e-07 | 116 |
primitive gut | 9.83e-07 | 116 |