FFCP PHASE1:Mm9::chrX:20447341..20447352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21857 | |EntrezGene=21857 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P12032 | |UniProt=P12032 | ||
|association_with_transcript=0bp_to_ENSMUST00000009530_5end | |||
|cluster_id=chrX:20447341..20447352,+ | |||
|description=CAGE_peak_3_at_Timp1_5end | |||
|id=chrX:20447341..20447352,+ | |||
|ontology_enrichment_celltype=CL:0000333!3.85e-07!10;CL:0000095!3.85e-07!10;CL:0000243!3.85e-07!10;CL:0000123!3.85e-07!10;CL:0000125!3.85e-07!10;CL:0000030!3.85e-07!10;CL:0000339!3.85e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,8.64e-11,10;CL:0000095,8.64e-11,10;CL:0000243,8.64e-11,10;CL:0000123,8.64e-11,10;CL:0000125,8.64e-11,10;CL:0000030,8.64e-11,10;CL:0000339,8.64e-11,10;CL:0002453,6.63e-09,8;CL:0000680,4.39e-08,6;CL:0000187,4.39e-08,6;CL:0000056,4.39e-08,6;CL:0000128,9.20e-08,6;CL:0000126,9.20e-08,6;CL:0000127,9.20e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.26e-07!23;UBERON:0001009!3.26e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.19e-08,120;UBERON:0004120,2.19e-08,120;UBERON:0006603,2.19e-08,120 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,6.54663453473002,6.9950082541465,6.05704282133549,4.69434806608824,3.48840250208714,6.81027166476863,9.13820525649132,11.6188729949051,4.31257693094915,0,0,0,11.0621557495457,6.01720223871389,7.21940929188419,0,0,0,6.77689064138264,10.6715375533337,4.49949858640699,8.89979726310277,5.6838409195688,3.59520132622086,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,3.48340489332647,5.97015324843606,0.579728977403356,0,0,0,0,0,0.421333260395256,7.6693645160126,10.9110121933205,9.89350808628953,0.14084341977668,2.56652954828636,2.54805239706646,0,5.62876706629157,4.05375784760158,4.04419556011827,0.22836775943812,0.517875767294343,2.9688427812965,1.73485326766136,2.13125834818499,3.22861696158482,2.41156224884196,2.4693628498498,0.879666139307728,0.741584903203122,0.144599356919912,0,4.04417124868523,2.42925670306433,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.42575109390443,1.99051152976149,0.505445516867349,0.210441855886474,0.910843100738926,0.229902104433473,0,1.05493372485001,0.95251098811859,0.384341160854549,0.749613796477831,0.258703370739016,0,0.378212160335639,1.75951124163949,2.41115305670332,1.66828349535359,2.089512999133,1.64625709126355,1.39323986772945,0,0,0,1.24275463521301,1.17263029990548,2.52086886045421,1.42046841351126,0.787056926989615,1.3884040159864,1.16266972375204,0.804820204198858,0.817357396570186,1.31647879930784,1.31333971263276,0.486412857275134,0.438599962275997,0.878200461164203,0.939444931322602,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.823494773620054,0,0.198956472041151,0,0,0,0,0.758671603812327,2.05647322697512,1.1270773567308,0,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.554259570499814,2.08440552947533,0.814824882210129,0.848725428875941,0.234690248288502,0.670025029767263,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,2.95058563811422,0.551873492609465,0.160550589987792,0,3.60656879828686,0.757412781613119,0,0.780877488593277,0.430846795465598,0.477937595905104,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,0,3.54850213020672,1.24645922567079,0.651547837414304,0,0,1.69946445308487,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.857348140126369,0.886701168211368,0.713475270408282,0.493647061806363,0.608929898229199,2.3467170806371,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.422190474497091,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0,0,1.73984796469624,1.01659733563424,0.540026704109006,1.04544148007234,1.09181281873089,0.674321731924103,0.578574190077352,0,0.518459893167171,0,0,3.43888055901151,2.81279433777066,2.13896307178452,3.87479470433193,3.54807863530634,2.34714477291508,1.17183946359555,0.734015410979976,0,0.288030006257865,0,0.608175645870493,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.292373642219257,0,0,0.453460767230423,0.665957860122194,0.269141569828427,1.67884616364078,0.386379188064381,5.06742683718191,0.36630324853453,1.07184189539533,2.00628841614145,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,1.99512436700516,0.341467211508268,0.243106717068294,0.209613162627982,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,1.26348605881899,0.50695859978048,0.377252682772152,0.842773567228942,0.89635213366817,0.861532034334199,1.42888107384922,0.347652977834566,0.964546102318525,0.412085900803307,1.03039244094078,2.05721551431249,0.70990322463735,1.43061713968393,1.16277133305863,0.658765662907314,0.507687647350059,0.548783918618318,1.31534855718921,0.814824683075171,0.561142271657738,1.54225523561426,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.701794825336225,0.644613162144895,1.72159498861959,2.64709702943419,3.47801753430632 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,6.54663453473002,6.9950082541465,6.05704282133549,4.69434806608824,3.48840250208714,6.81027166476863,9.13820525649132,11.6188729949051,4.31257693094915,0,0,0,11.0621557495457,6.01720223871389,7.21940929188419,0,0,0,6.77689064138264,10.6715375533337,4.49949858640699,8.89979726310277,5.6838409195688,3.59520132622086,1.15265491596466,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,3.48340489332647,5.97015324843606,0.579728977403356,0,0,0,0,0,0.421333260395256,7.6693645160126,10.9110121933205,9.89350808628953,0.14084341977668,2.56652954828636,2.54805239706646,0,5.62876706629157,4.05375784760158,4.04419556011827,0.22836775943812,0.517875767294343,2.9688427812965,1.73485326766136,2.13125834818499,3.22861696158482,2.41156224884196,2.4693628498498,0.879666139307728,0.741584903203122,0.144599356919912,0,4.04417124868523,2.42925670306433,2.42437626567611,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.42575109390443,1.99051152976149,0.505445516867349,0.210441855886474,0.910843100738926,0.229902104433473,0,1.05493372485001,0.95251098811859,0.384341160854549,0.749613796477831,0.258703370739016,0,0.378212160335639,1.75951124163949,2.41115305670332,1.66828349535359,2.089512999133,1.64625709126355,1.39323986772945,0,0,0,1.24275463521301,1.17263029990548,2.52086886045421,1.42046841351126,0.787056926989615,1.3884040159864,1.16266972375204,0.804820204198858,0.817357396570186,1.31647879930784,1.31333971263276,0.486412857275134,0.438599962275997,0.878200461164203,0.939444931322602,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,0.77320476793256,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.823494773620054,0,0.198956472041151,0,0,0,0,0.758671603812327,2.05647322697512,1.1270773567308,0,0.775809948670503,0.350679099451593,0.126473074248515,0,0,0,0,0.500535317148282,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.554259570499814,2.08440552947533,0.814824882210129,0.848725428875941,0.234690248288502,0.670025029767263,0.476087281772027,0.585400943573396,0.630540576424764,0.44292937929755,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,2.95058563811422,0.551873492609465,0.160550589987792,0,3.60656879828686,0.757412781613119,0,0.780877488593277,0.430846795465598,0.477937595905104,1.11399337041197,0.566153061577665,0,0.584511715822624,0.395287777946524,0,3.54850213020672,1.24645922567079,0.651547837414304,0,0,1.69946445308487,0.906970670894253,0.565815239267694,1.18120757152309,0.614870295887855,0,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.388076051348264,0.857348140126369,0.886701168211368,0.713475270408282,0.493647061806363,0.608929898229199,2.3467170806371,0.63549621259146,0.220528398054962,0.32977250588296,0.645857706783622,0.422190474497091,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.170870880797853,0.619160603889667,0.555583582109135,0,0,0.228778173206523,0,0.139951452323658,0,0,1.73984796469624,1.01659733563424,0.540026704109006,1.04544148007234,1.09181281873089,0.674321731924103,0.578574190077352,0,0.518459893167171,0,0,3.43888055901151,2.81279433777066,2.13896307178452,3.87479470433193,3.54807863530634,2.34714477291508,1.17183946359555,0.734015410979976,0,0.288030006257865,0,0.608175645870493,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.292373642219257,0,0,0.453460767230423,0.665957860122194,0.269141569828427,1.67884616364078,0.386379188064381,5.06742683718191,0.36630324853453,1.07184189539533,2.00628841614145,0,0,0,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0.103787347584177,1.99512436700516,0.341467211508268,0.243106717068294,0.209613162627982,0.919217542250071,0.888986911206461,1.03017528619447,0.320919209591815,1.26348605881899,0.50695859978048,0.377252682772152,0.842773567228942,0.89635213366817,0.861532034334199,1.42888107384922,0.347652977834566,0.964546102318525,0.412085900803307,1.03039244094078,2.05721551431249,0.70990322463735,1.43061713968393,1.16277133305863,0.658765662907314,0.507687647350059,0.548783918618318,1.31534855718921,0.814824683075171,0.561142271657738,1.54225523561426,0.689531376628944,0.409231043169689,0.619747364743864,1.15743966588685,0.999242311751784,0.701794825336225,0.644613162144895,1.72159498861959,2.64709702943419,3.47801753430632 | ||
|short_description=p3@Timp1 | |||
}} | }} |
Latest revision as of 19:33, 1 October 2015
Short description: | p3@Timp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Timp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000009530_5end |
EntrezGene: | Timp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 8.64e-11 | 10 |
neuron associated cell | 8.64e-11 | 10 |
glial cell (sensu Vertebrata) | 8.64e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 8.64e-11 | 10 |
glial cell | 8.64e-11 | 10 |
glioblast | 8.64e-11 | 10 |
glioblast (sensu Vertebrata) | 8.64e-11 | 10 |
oligodendrocyte precursor cell | 6.63e-09 | 8 |
muscle precursor cell | 4.39e-08 | 6 |
muscle cell | 4.39e-08 | 6 |
myoblast | 4.39e-08 | 6 |
oligodendrocyte | 9.20e-08 | 6 |
macroglial cell | 9.20e-08 | 6 |
astrocyte | 9.20e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.19e-08 | 120 |
mesoderm-derived structure | 2.19e-08 | 120 |
presumptive mesoderm | 2.19e-08 | 120 |