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FFCP PHASE1:Mm9::chr3:153575905..153575924,-: Difference between revisions

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{{FFCP|EntrezGene=19352|HGNC=|MCL_coexpression_id=255|UniProt=Q3TVF4|association_with_transcript=5bp_to_ENSMUST00000089950,NM_001163478,NR_028094,uc008ruf.2,uc012czt.1_5end|description=CAGE_peak_1_at_Rabggtb_5end|id=chr3:153575905..153575924,-|ontology_enrichment_celltype=CL:0000988!1.73e-10!32;CL:0002032!1.73e-10!32;CL:0000037!1.73e-10!32;CL:0000566!1.73e-10!32;CL:0000837!1.73e-10!32;CL:0002320!5.04e-08!46;CL:0000134!5.04e-08!46;CL:0000063!1.26e-07!66;CL:0002031!1.31e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.73e-10,32;CL:0002032,1.73e-10,32;CL:0000037,1.73e-10,32;CL:0000837,1.73e-10,32;CL:0002320,5.04e-08,46;CL:0000134,5.04e-08,46;CL:0002031,1.31e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.56e-09!51;UBERON:0003929!2.51e-08!55;UBERON:0002405!2.77e-08!70;UBERON:0002384!5.04e-08!46;UBERON:0001041!1.03e-07!92;UBERON:0002107!4.36e-07!22;UBERON:0007499!4.36e-07!22;UBERON:0006925!4.36e-07!22;UBERON:0009497!4.36e-07!22;UBERON:0000015!4.36e-07!22;UBERON:0002423!4.36e-07!22;UBERON:0006235!4.36e-07!22;UBERON:0008835!4.36e-07!22;UBERON:0003894!4.36e-07!22;UBERON:0004161!4.36e-07!22;UBERON:0008836!4.36e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0003929,2.51e-08,55;UBERON:0002384,5.04e-08,46;UBERON:0002107,4.36e-07,22;UBERON:0007499,4.36e-07,22;UBERON:0006925,4.36e-07,22;UBERON:0009497,4.36e-07,22;UBERON:0000015,4.36e-07,22;UBERON:0002423,4.36e-07,22;UBERON:0006235,4.36e-07,22;UBERON:0008835,4.36e-07,22;UBERON:0003894,4.36e-07,22;UBERON:0004161,4.36e-07,22;UBERON:0008836,4.36e-07,22|phase1_expression=13.9329496981171,13.6100408979351,14.5599756604652,23.2897442706259,28.5510566069418,20.1455126294268,18.6890112476421,24.5334314538995,60.398361803065,60.3886477910743,75.5071239874477,70.9174493468541,28.0769197087177,25.7890187136042,39.3069518942482,36.4455481301687,67.1579403003021,19.874116417569,18.921791837592,26.3121584114779,6.4632900514813,17.3759164601549,20.112383763698,11.1994695955385,17.4351053611049,13.7815671387605,15.0766698655676,11.635446565038,11.2113817479261,14.617747526076,17.5167103417691,199.399631466324,196.205667239478,190.178017218526,33.2179362713966,22.275442478038,32.4629276457167,3.34825304589526,5.4693474116666,6.28228492768558,3.52938892818609,2.04913645487534,8.25367600152961,8.18329316841252,8.81979301609777,11.5634453861859,15.6478268869608,11.3373081317832,6.15121311656521,9.91592485278845,9.23910382727393,4.31257693094915,22.3150866056789,33.3666585325218,32.9371923159615,16.2073444702647,21.203474555468,10.8291139378263,9.3065571995415,10.5798195854407,7.60597684207415,9.82649143000483,4.4464739805557,5.39939830368839,8.89979726310277,7.8152812644071,5.09320187881288,6.91592949578798,12.4427534770173,12.0155285115205,11.7781978356774,8.85518051651791,8.83474163806454,10.9016811301309,12.4599112323707,9.19218786610021,7.70811166995721,12.0026097800076,9.5236050618871,7.38563211289086,8.5083508550241,8.33461392890816,8.93385596804419,16.8828783009504,8.25110537994775,12.9636577608414,16.5151149726959,15.4711540034999,18.4771911732969,12.1670211771925,23.4790235848359,33.5565312022741,44.8781080247115,28.0645659651665,22.7421746106684,14.3368603871147,10.6737759300131,12.1005529030421,19.743736349818,19.7870161725791,16.0561498545416,10.2661181931454,0,7.11066703153331,30.9582188646036,26.0960661439352,23.25412447068,9.47726201668198,10.616453229534,12.3206975423805,20.471268558404,14.9188084372949,17.7573932887165,15.2229866958149,16.4624189989987,10.5559936716927,9.64060374164058,10.7003524120735,29.1921482143459,19.0884882937943,20.759102735277,20.3647606316793,13.0474232852686,17.5668478206928,14.2423760633149,9.19645398750929,27.078218138338,49.1920239414594,28.7178713185126,7.78911324905078,7.32000964509802,7.16229807043327,9.03886464999838,8.43861009190091,7.06479351502504,8.59878694259116,15.6832620329487,14.3068016201607,11.1198013710817,12.416069497302,18.2168620147785,21.6107978167465,14.2249082546226,14.6183673300644,12.9269348387523,15.7579875950365,14.3363638576385,14.2286853906459,11.2095356325078,17.3977593754394,16.5394056714112,24.1115305670332,15.2925987074079,20.89512999133,16.4625709126355,19.9034266818493,27.3863143052162,33.455227924913,28.9846769383505,21.9553318887632,17.8239805585633,16.0255234700303,19.4130683179872,22.431122419204,18.8205877722601,28.6016752043002,14.4867636755794,23.2363031310667,25.342216886676,22.1626076506779,16.3758995282629,16.5205985790626,16.4662586468288,15.5679445762031,12.6173969138476,8.23236899034275,10.9038198384653,17.982638533121,18.3427895460301,22.9914305141834,21.0053961955012,19.5633018884642,17.7902435075896,17.1203063501303,14.7104009078799,14.658206970437,18.8501406600202,10.544693018181,13.8424501854575,9.88701349519644,12.1037307929829,14.5373129475688,14.4147604724342,21.1359748327998,27.0498565615393,19.1432248174595,17.8436288194216,15.3597445559798,13.9752747044609,11.513591542409,12.8738956829927,13.6970851953199,17.194252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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19352
|HGNC=
|MCL_coexpression_id=255
|TSSclassifier=NA
|UniProt=Q3TVF4
|association_with_transcript=5bp_to_ENSMUST00000089950,NM_001163478,NR_028094,uc008ruf.2,uc012czt.1_5end
|cluster_id=chr3:153575905..153575924,-
|description=CAGE_peak_1_at_Rabggtb_5end
|id=chr3:153575905..153575924,-
|ontology_enrichment_celltype=CL:0000988!1.73e-10!32;CL:0002032!1.73e-10!32;CL:0000037!1.73e-10!32;CL:0000566!1.73e-10!32;CL:0000837!1.73e-10!32;CL:0002320!5.04e-08!46;CL:0000134!5.04e-08!46;CL:0000063!1.26e-07!66;CL:0002031!1.31e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,1.73e-10,32;CL:0002032,1.73e-10,32;CL:0000037,1.73e-10,32;CL:0000837,1.73e-10,32;CL:0002320,5.04e-08,46;CL:0000134,5.04e-08,46;CL:0002031,1.31e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!2.56e-09!51;UBERON:0003929!2.51e-08!55;UBERON:0002405!2.77e-08!70;UBERON:0002384!5.04e-08!46;UBERON:0001041!1.03e-07!92;UBERON:0002107!4.36e-07!22;UBERON:0007499!4.36e-07!22;UBERON:0006925!4.36e-07!22;UBERON:0009497!4.36e-07!22;UBERON:0000015!4.36e-07!22;UBERON:0002423!4.36e-07!22;UBERON:0006235!4.36e-07!22;UBERON:0008835!4.36e-07!22;UBERON:0003894!4.36e-07!22;UBERON:0004161!4.36e-07!22;UBERON:0008836!4.36e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0003929,2.51e-08,55;UBERON:0002384,5.04e-08,46;UBERON:0002107,4.36e-07,22;UBERON:0007499,4.36e-07,22;UBERON:0006925,4.36e-07,22;UBERON:0009497,4.36e-07,22;UBERON:0000015,4.36e-07,22;UBERON:0002423,4.36e-07,22;UBERON:0006235,4.36e-07,22;UBERON:0008835,4.36e-07,22;UBERON:0003894,4.36e-07,22;UBERON:0004161,4.36e-07,22;UBERON:0008836,4.36e-07,22
|phase1_expression=13.9329496981171,13.6100408979351,14.5599756604652,23.2897442706259,28.5510566069418,20.1455126294268,18.6890112476421,24.5334314538995,60.398361803065,60.3886477910743,75.5071239874477,70.9174493468541,28.0769197087177,25.7890187136042,39.3069518942482,36.4455481301687,67.1579403003021,19.874116417569,18.921791837592,26.3121584114779,6.4632900514813,17.3759164601549,20.112383763698,11.1994695955385,17.4351053611049,13.7815671387605,15.0766698655676,11.635446565038,11.2113817479261,14.617747526076,17.5167103417691,199.399631466324,196.205667239478,190.178017218526,33.2179362713966,22.275442478038,32.4629276457167,3.34825304589526,5.4693474116666,6.28228492768558,3.52938892818609,2.04913645487534,8.25367600152961,8.18329316841252,8.81979301609777,11.5634453861859,15.6478268869608,11.3373081317832,6.15121311656521,9.91592485278845,9.23910382727393,4.31257693094915,22.3150866056789,33.3666585325218,32.9371923159615,16.2073444702647,21.203474555468,10.8291139378263,9.3065571995415,10.5798195854407,7.60597684207415,9.82649143000483,4.4464739805557,5.39939830368839,8.89979726310277,7.8152812644071,5.09320187881288,6.91592949578798,12.4427534770173,12.0155285115205,11.7781978356774,8.85518051651791,8.83474163806454,10.9016811301309,12.4599112323707,9.19218786610021,7.70811166995721,12.0026097800076,9.5236050618871,7.38563211289086,8.5083508550241,8.33461392890816,8.93385596804419,16.8828783009504,8.25110537994775,12.9636577608414,16.5151149726959,15.4711540034999,18.4771911732969,12.1670211771925,23.4790235848359,33.5565312022741,44.8781080247115,28.0645659651665,22.7421746106684,14.3368603871147,10.6737759300131,12.1005529030421,19.743736349818,19.7870161725791,16.0561498545416,10.2661181931454,0,7.11066703153331,30.9582188646036,26.0960661439352,23.25412447068,9.47726201668198,10.616453229534,12.3206975423805,20.471268558404,14.9188084372949,17.7573932887165,15.2229866958149,16.4624189989987,10.5559936716927,9.64060374164058,10.7003524120735,29.1921482143459,19.0884882937943,20.759102735277,20.3647606316793,13.0474232852686,17.5668478206928,14.2423760633149,9.19645398750929,27.078218138338,49.1920239414594,28.7178713185126,7.78911324905078,7.32000964509802,7.16229807043327,9.03886464999838,8.43861009190091,7.06479351502504,8.59878694259116,15.6832620329487,14.3068016201607,11.1198013710817,12.416069497302,18.2168620147785,21.6107978167465,14.2249082546226,14.6183673300644,12.9269348387523,15.7579875950365,14.3363638576385,14.2286853906459,11.2095356325078,17.3977593754394,16.5394056714112,24.1115305670332,15.2925987074079,20.89512999133,16.4625709126355,19.9034266818493,27.3863143052162,33.455227924913,28.9846769383505,21.9553318887632,17.8239805585633,16.0255234700303,19.4130683179872,22.431122419204,18.8205877722601,28.6016752043002,14.4867636755794,23.2363031310667,25.342216886676,22.1626076506779,16.3758995282629,16.5205985790626,16.4662586468288,15.5679445762031,12.6173969138476,8.23236899034275,10.9038198384653,17.982638533121,18.3427895460301,22.9914305141834,21.0053961955012,19.5633018884642,17.7902435075896,17.1203063501303,14.7104009078799,14.658206970437,18.8501406600202,10.544693018181,13.8424501854575,9.88701349519644,12.1037307929829,14.5373129475688,14.4147604724342,21.1359748327998,27.0498565615393,19.1432248174595,17.8436288194216,15.3597445559798,13.9752747044609,11.513591542409,12.8738956829927,13.6970851953199,17.1942523710546,37.206458574689,32.2356751985653,37.7768348806554,32.254759300772,37.1412826018722,36.6661226565245,30.4957905697859,20.2669033468794,23.0631587077988,31.629005436018,13.7692150637346,20.594486425561,18.6908369680863,17.9397413521912,17.3679667690812,8.49864674766381,24.254900706622,15.4816727619925,19.5206848641466,15.9589368836181,16.9181320016234,12.8543566078447,9.36641509717434,9.30047350226527,8.41565820665345,10.8429242687091,6.882259218061,10.7064688756855,8.24499633914616,15.0791283939272,16.3171705145613,13.769399644533,19.8674457339407,7.38532713943843,9.72856998715286,7.86887737808042,14.6433137778536,18.9304931649754,24.5976408906882,15.7259080344943,22.941004603445,22.5026660823218,19.5322806244294,15.382806663646,18.4121190484126,16.602086673754,11.8888887076069,14.9037089468682,13.8891170860459,15.1484872198826,11.8778488540226,14.6019652173959,17.4802058031587,27.2091201268276,19.9921384541252,14.1744908582771,26.1319875752338,25.0675444373175,18.5402202033528,21.3898427030833,28.7593449721593,23.1920938864997,21.6584640821192,14.6389030474129,15.3051929926614,12.8065096944927,14.1462443120851,12.945837055886,9.81028496811388,13.3284706687718,7.91608867697958,16.192347856396,12.921756322693,8.38007912608855,13.1909002353184,15.339120536111,18.8176325775846,16.3540111284297,17.8913580722117,11.9507143018239,9.45669040253599,25.6306321196779,17.9556575128004,27.7791791054568,37.8620598579429,22.1444648908061,30.198718863261,30.0861821089124,29.2498535356445,30.4039942369732,7.63736494412091,20.2455035891927,23.5850581867144,21.8170788460039,15.4725339050707,18.3424553546789,21.1737023824169,14.2990478404831,16.4906243449939,11.7949625695532,13.0481255748254,1.69107881605257,16.8953697029696,15.222181122053,16.3338998209,15.8866582877609,15.8818757961331,16.195298933114,13.6714604086148,12.3734026422339,6.03960302065015,5.47257011889944,14.8525226695244,16.6234676537935,17.8717065466799,21.566856614314,18.6187763494181,14.9011016085949,16.3465811347158,17.8704327881238,18.1739609906666,17.451358723995,19.6611061016839,18.0297079368542,17.9916143867416,18.2327967403248,15.4176660858344,37.5156261202169,31.3998498133165,29.0440386309856,9.27310051354514,14.2638681342898,17.0331010568557,16.9351019472462,10.0314420807073,7.90652579663893,9.66682996665071,13.7494923225455,8.248952752497,6.16574267793578,9.82012066606611,15.5255175053315,8.55610286126019,8.15656336171568,10.3552062350364,6.95375228813984,13.9658705690361,22.1953687480374,17.7467903459855,11.528723944539,8.45680138870065,20.4466989577486,26.3724873265785,20.5388294138762,18.699593670521,18.7574681918777,19.805765845538,16.8554713445788,18.3752187401975,18.4367855347519,22.3858034903045,18.6573764771217,18.326375944052,23.0768104449852,20.4606498986812,16.1148548621145,18.4574838405711,16.6905332963125,21.5112696615846,21.4569387346954,19.7152036387606,19.0245091787683,17.3626009548976,18.6051635968831,19.0788372363631,20.1679530811096,16.253239591968,28.6461730218783,22.0010314484072,16.7828751553593,10.2422336954558,17.3109390249602,14.6112316752843,17.2159498861959,12.1325280515734,17.1582198359112
|short_description=p1@Rabggtb
}}

Latest revision as of 20:07, 1 October 2015

Short description:p1@Rabggtb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rabggtb_5end
Coexpression cluster:MCL_coexpression_mm9:255
Association with transcript: 5bp_to_ENSMUST00000089950, NM_001163478, NR_028094, uc008ruf.2, uc012czt.1_5end
EntrezGene:Rabggtb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rabggtb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.29
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.69
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E760.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F260.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E675.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F170.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A336.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A567.16
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.87
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.11
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.44
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I211.64
Ileum epithelium, pool1.CNhs13199.10252-104B911.21
Ileum epithelium, pool2.CNhs13232.10253-104C114.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3199.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6196.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9190.18
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F533.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A222.32
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.94
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.21
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.39
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D918.48
Mouse Schwann, donor2.CNhs12573.11746-123F912.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F733.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.06
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.48
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C520.47
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I117.76
adrenal gland, embryo E18.CNhs11026.1262-18F515.22
adrenal gland, neonate N00.CNhs11191.1311-23C116.46
adrenal gland, neonate N25.CNhs11223.1377-27I310.56
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H110.70
bone (os femoris), adult.CNhs10483.56-12G229.19
bone (os femoris), neonate N02.CNhs11227.1985-43F519.09
bone (os femoris), neonate N16.CNhs11225.1525-43A620.76
bone (os femoris), neonate N20.CNhs11195.1350-25C320.36
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C727.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D149.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.72
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.68
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.31
epididymis, adult.CNhs10490.58-23B211.12
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C618.22
eyeball, embryo E14.CNhs10521.399-16E221.61
eyeball, embryo E15.CNhs10593.426-16C914.22
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C612.93
eyeball, neonate N01.CNhs11140.1532-43E715.76
eyeball, neonate N02.CNhs11205.1551-44G814.34
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H217.40
forelimb, embryo E13.CNhs10589.384-1E216.54
forelimb, embryo E14.CNhs10577.413-26A824.11
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C420.90
forelimb, embryo E18.CNhs11008.1520-43B516.46
gonad, embryo E13.CNhs11044.1564-45I619.90
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D233.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D528.98
heart, embryo E11.CNhs10586.331-24E921.96
heart, embryo E12.CNhs11015.353-12F517.82
heart, embryo E13.CNhs11013.376-3I916.03
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C822.43
heart, embryo E16.CNhs11021.457-17C618.82
heart, embryo E17.CNhs11025.479-18E528.60
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E323.24
heart, neonate N03.CNhs11221.1349-25I225.34
heart, neonate N10.CNhs11118.749-24G122.16
heart, neonate N16.CNhs11209.782-15G116.38
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D215.57
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A317.98
intestine, embryo E12.CNhs11019.1251-16I518.34
intestine, embryo E13.CNhs11010.381-16D522.99
intestine, embryo E15.CNhs10602.976-16D821.01
intestine, embryo E16.CNhs10585.463-22H419.56
intestine, embryo E17.CNhs10582.482-18D317.79
intestine, embryo E18.CNhs10526.1289-20F717.12
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E914.66
intestine, neonate N06.CNhs11102.688-20B818.85
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A513.84
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E312.10
intestine, neonate N30.CNhs11131.1384-42G114.54
kidney, embryo E14.CNhs10606.411-4I914.41
kidney, embryo E15.CNhs10997.434-16F821.14
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C717.84
kidney, neonate N00.CNhs11214.646-21G715.36
kidney, neonate N10.CNhs11206.758-6D513.98
kidney, neonate N20.CNhs11113.832-19I111.51
kidney, neonate N25.CNhs11122.1353-25F312.87
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B217.19
liver, embryo E12.CNhs10601.355-15F837.21
liver, embryo E13.CNhs10524.378-3H632.24
liver, embryo E14.CNhs10594.409-16E137.78
liver, embryo E15.CNhs10520.433-16D732.25
liver, embryo E16.CNhs10523.462-17F537.14
liver, embryo E17.CNhs10510.481-18A336.67
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F420.27
liver, neonate N03.CNhs11123.1345-25G223.06
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B920.59
liver, neonate N20.CNhs11220.823-25A318.69
liver, neonate N25.CNhs11198.1368-26H117.94
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B18.50
lung, embryo E12.CNhs10522.354-16G224.25
lung, embryo E14.CNhs10604.404-26F815.48
lung, embryo E15.CNhs11020.432-17C519.52
lung, embryo E16.CNhs10998.458-17B615.96
lung, embryo E17.CNhs10605.480-44A616.92
lung, embryo E18.CNhs10583.1287-20I612.85
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E59.30
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C710.71
lung, neonate N30.CNhs11133.1394-42H28.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H219.87
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.64
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.73
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.94
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H713.89
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F417.48
pancreas, embryo E15.CNhs11042.1556-45F227.21
pancreas, embryo E16.CNhs11003.460-26E519.99
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G925.07
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D821.39
pancreas, neonate N16.CNhs11136.787-43B628.76
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I716.19
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C313.19
skin, neonate N00.CNhs11124.650-25G415.34
skin, neonate N03.CNhs11215.662-22H318.82
skin, neonate N06.CNhs11097.693-20I516.35
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G225.63
spleen, embryo E16.CNhs11035.461-43C117.96
spleen, embryo E18.CNhs11011.1271-21F227.78
spleen, neonate N10.CNhs11116.752-24D137.86
spleen, neonate N20.CNhs11112.824-19H122.14
spleen, neonate N25.CNhs11099.1354-25G330.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D330.40
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E320.25
stomach, embryo E15.CNhs10603.1252-16G823.59
stomach, embryo E16.CNhs11022.459-17D421.82
stomach, embryo E17.CNhs11006.1035-18D515.47
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B821.17
stomach, neonate N07.CNhs11210.718-18A914.30
stomach, neonate N25.CNhs11104.1355-25E416.49
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C515.22
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I515.89
testis, embryo E18.CNhs11027.503-18G515.88
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I413.67
testis, neonate N10.CNhs11204.763-44D912.37
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B514.85
thymus, embryo E14.CNhs11041.402-44I416.62
thymus, embryo E15.CNhs11005.430-45I217.87
thymus, embryo E16.CNhs11002.456-26C521.57
thymus, embryo E17.CNhs10581.478-18C118.62
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C717.87
thymus, neonate N06.CNhs11197.681-26C418.17
thymus, neonate N07.CNhs11211.713-19D317.45
thymus, neonate N10.CNhs11194.748-24E419.66
thymus, neonate N20.CNhs11186.820-7A218.03
thymus, neonate N25.CNhs11125.1362-25G717.99
thymus, neonate N30.CNhs11132.1393-42G218.23
tongue, adult.CNhs10499.32-1B415.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H337.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G529.04
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F514.26
uterus, adult.CNhs10509.92-27E517.03
vagina, adult.CNhs10502.89-27D516.94
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I86.95
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H222.20
whole body, embryo E14.5.CNhs10578.420-27D217.75
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.00
whole body, embryo E17.5.CNhs10513.490-9F916.78
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B317.31
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C617.22
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B417.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gut epithelium2.51e-0855
connective tissue5.04e-0846
liver4.36e-0722
epithelial sac4.36e-0722
digestive gland4.36e-0722
epithelium of foregut-midgut junction4.36e-0722
anatomical boundary4.36e-0722
hepatobiliary system4.36e-0722
foregut-midgut junction4.36e-0722
hepatic diverticulum4.36e-0722
liver primordium4.36e-0722
septum transversum4.36e-0722
liver bud4.36e-0722
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