FFCP PHASE1:Mm9::chr19:18706238..18706243,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20409 | |EntrezGene=20409 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENSMUST00000156908_5end | |association_with_transcript=-8bp_to_ENSMUST00000156908_5end | ||
|cluster_id=chr19:18706238..18706243,- | |||
|description=CAGE_peak_3_at_Ostf1_5end | |description=CAGE_peak_3_at_Ostf1_5end | ||
|id=chr19:18706238..18706243,- | |id=chr19:18706238..18706243,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.83e-07,3;CL:0002202,1.83e-07,3;CL:0000069,1.83e-07,3;CL:0002632,1.83e-07,3;CL:0002368,1.83e-07,3;CL:0000307,1.83e-07,3;CL:0000377,1.83e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.64e-08,3;DOID:4045,1.64e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0009569!3.26e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.05e-07,3;UBERON:0000478,1.05e-07,3;UBERON:0000158,1.05e-07,3;UBERON:0003126,1.83e-07,3;UBERON:0001005,1.83e-07,3;UBERON:0007196,1.83e-07,3;UBERON:0001558,1.83e-07,3;UBERON:0003104,1.94e-07,61;UBERON:0009142,1.94e-07,61 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0,0,0.563154888606667,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0.411343300817216,0,0.17008658030214,0.695036658406197,0.522399578277871,0.159992422793407,1.14704640533585,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.498703936075477,0.612508068787107,12.9744805528441,17.9707129240474,10.9939986234498,9.99993529652724,10.2456822743767,11.6522484727477,0,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0.419959264876088,0,0.335565212115473,0.725362142011344,1.34437519656986,1.02903774414379,0.573066879877513,0.515672092277442,0.404632921719196,0,0,0.338844532069132,0,0.449949858640699,0,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.37863096666592,0.377857800533928,1.15945795480671,2.58127163094416,1.3599426674155,0,3.24888208723835,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,0,0,1.94841936910093,2.28023878927589,1.51657333504435,0.45673551887624,1.03575153458869,0.890652834388949,0,0.913396434936424,0.922461989024234,0.301445281105245,0.470354828542819,0.628332956648377,2.22475470960936,0.289198713839823,0.884610551949874,0.647067399789637,1.10420759230197,0,0,0,0.209446706813455,0.766371165625774,0.11981512450592,1.19980546198682,0.381210681219194,0,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,1.12023300235348,0.870848794270651,0.505445516867349,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0,0.374806898238915,0,0,0.378212160335639,0.351902248327898,0,0,1.74126083261083,0.411564272815887,0,1.40442637462647,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,1.05088808130453,0.822799249567402,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.671032093801859,0,0.205809224758569,1.98251269790279,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.380451252225118,1.89811624617805,0.658795818896044,0,0.795825888164603,0.19496408711912,0,1.08069024937347,0.597423819763102,0.758671603812327,0.342745537829186,0,0.407302655690628,1.16371492300575,2.45475369616115,1.58091342810643,1.91893192373483,0.941992367048249,1.97435462274881,0.889357881261447,0.333690211432188,0,0.224862112384854,0.405720242777006,0.482354319504834,0,0.575392274901621,1.13494658742525,0.823684239564244,0,1.48856379067401,0,1.01031551178845,0.358794827043824,0.964887042726734,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,2.73187107000918,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.518054945597687,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0.642202359951168,0.468846746368813,0.163934945376675,0.504941854408746,0,0,0,0,0,0.566153061577665,0,0,0.395287777946524,0,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.388076051348264,0.643011105094777,0.532020700926821,0.178368817602071,1.31639216481697,0.913394847343798,1.64270195644597,4.02480934641258,0.220528398054962,0.16488625294148,0.968786560175433,0.784068024066026,0.477489376012546,0,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.740778109478847,0.565105371014073,0.27338845544205,0,0.169978429993855,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0,0.90730481304255,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0.240390899039938,0.738447635872886,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0,0.179427713218951,0,0,1.68914227906064,0.36630324853453,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.729320151204882,0,0.735374033800057,0,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.128050304809739,0.516919220600519,0,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,1.42362021749009,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,0.249810577937946,0.233931608445408,0,0.57386499620653,0.882365676478062,0.695603506861264 | |phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0,0,0.563154888606667,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0.411343300817216,0,0.17008658030214,0.695036658406197,0.522399578277871,0.159992422793407,1.14704640533585,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0.498703936075477,0.612508068787107,12.9744805528441,17.9707129240474,10.9939986234498,9.99993529652724,10.2456822743767,11.6522484727477,0,0.101376931219515,0,0.782391344348039,0,0.439372365468944,0,0.419959264876088,0,0.335565212115473,0.725362142011344,1.34437519656986,1.02903774414379,0.573066879877513,0.515672092277442,0.404632921719196,0,0,0.338844532069132,0,0.449949858640699,0,2.1314403448383,0.299600110518405,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0.37863096666592,0.377857800533928,1.15945795480671,2.58127163094416,1.3599426674155,0,3.24888208723835,0,0.140444420131752,0,0.259786004602869,0,0.563373679106722,0,0,0,1.94841936910093,2.28023878927589,1.51657333504435,0.45673551887624,1.03575153458869,0.890652834388949,0,0.913396434936424,0.922461989024234,0.301445281105245,0.470354828542819,0.628332956648377,2.22475470960936,0.289198713839823,0.884610551949874,0.647067399789637,1.10420759230197,0,0,0,0.209446706813455,0.766371165625774,0.11981512450592,1.19980546198682,0.381210681219194,0,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,1.12023300235348,0.870848794270651,0.505445516867349,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0,0.374806898238915,0,0,0.378212160335639,0.351902248327898,0,0,1.74126083261083,0.411564272815887,0,1.40442637462647,0.51469581422943,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,1.05088808130453,0.822799249567402,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.671032093801859,0,0.205809224758569,1.98251269790279,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.380451252225118,1.89811624617805,0.658795818896044,0,0.795825888164603,0.19496408711912,0,1.08069024937347,0.597423819763102,0.758671603812327,0.342745537829186,0,0.407302655690628,1.16371492300575,2.45475369616115,1.58091342810643,1.91893192373483,0.941992367048249,1.97435462274881,0.889357881261447,0.333690211432188,0,0.224862112384854,0.405720242777006,0.482354319504834,0,0.575392274901621,1.13494658742525,0.823684239564244,0,1.48856379067401,0,1.01031551178845,0.358794827043824,0.964887042726734,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,0.502518772325447,0.714130922658041,2.73187107000918,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.518054945597687,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0.642202359951168,0.468846746368813,0.163934945376675,0.504941854408746,0,0,0,0,0,0.566153061577665,0,0,0.395287777946524,0,0.141940085208269,0.534196811001766,0.162886959353576,0.659880491890142,0,0.485561272309963,0,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.388076051348264,0.643011105094777,0.532020700926821,0.178368817602071,1.31639216481697,0.913394847343798,1.64270195644597,4.02480934641258,0.220528398054962,0.16488625294148,0.968786560175433,0.784068024066026,0.477489376012546,0,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.740778109478847,0.565105371014073,0.27338845544205,0,0.169978429993855,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0,0.90730481304255,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0.240390899039938,0.738447635872886,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0,0.179427713218951,0,0,1.68914227906064,0.36630324853453,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0.512200817262403,0.729320151204882,0,0.735374033800057,0,0.412070114477788,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.468207537349412,0.128050304809739,0.516919220600519,0,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,1.42362021749009,0.689531376628944,0.409231043169689,0.464810523557898,0.964533054905707,0.249810577937946,0.233931608445408,0,0.57386499620653,0.882365676478062,0.695603506861264 | ||
|short_description=p3@Ostf1 | |short_description=p3@Ostf1 | ||
}} | }} |
Latest revision as of 23:09, 1 October 2015
Short description: | p3@Ostf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ostf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -8bp_to_ENSMUST00000156908_5end |
EntrezGene: | Ostf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.83e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.83e-07 | 3 |
branched duct epithelial cell | 1.83e-07 | 3 |
epithelial cell of lower respiratory tract | 1.83e-07 | 3 |
respiratory epithelial cell | 1.83e-07 | 3 |
tracheal epithelial cell | 1.83e-07 | 3 |
tracheoblast | 1.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.05e-07 | 3 |
extraembryonic structure | 1.05e-07 | 3 |
membranous layer | 1.05e-07 | 3 |
trachea | 1.83e-07 | 3 |
respiratory airway | 1.83e-07 | 3 |
tracheobronchial tree | 1.83e-07 | 3 |
lower respiratory tract | 1.83e-07 | 3 |
mesenchyme | 1.94e-07 | 61 |
entire embryonic mesenchyme | 1.94e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.64e-08 | 3 |
muscle cancer | 1.64e-08 | 3 |