Swissregulon:ARID5B.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:84159:ARID5B:AT rich interactive domain 5B (MRF1-like)::NM_032199:FLJ21150,MRF2 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0005737!cytoplasm!3.15220003602233e-05!51164;4924;8522;9610;5245;2135;23002;27095;197258;10495;498;10806;4093;84276;79877;5347;390;4190;203068;23026;1639;114789;26191;8508;9859;116138;1677;27314;4724;4201;6733;57532;11345;1756;79590;8655;2904;51205;10150;4836;25873;6860;25953;4133;10146;162605;8636;623;27130;7158;22907$GO:0044424!intracellular part!3.15220003602233e-05!348327;8522;8086;27095;10495;498;10806;4093;83699;79877;4190;7156;23026;83746;1639;114789;56946;400720;26191;8508;9859;116138;1677;27314;4201;57532;1756;4836;1389;162239;25873;8820;6860;10535;7701;26137;9414;8636;58506;51164;4924;5245;9610;23002;2135;197258;29882;84276;5571;5347;390;203068;8450;6878;4724;6733;4661;11103;400569;11345;79590;8655;2904;51205;10150;4133;25953;10146;162605;27130;623;23583;7158;22907$GO:0043229!intracellular organelle!0.000162966112546714!348327;58506;51164;4924;9610;5245;2135;8086;27095;498;10806;4093;83699;5571;84276;5347;390;203068;7156;23026;6878;83746;1639;114789;56946;400720;8508;9859;116138;1677;27314;4724;6733;57532;4661;11103;400569;11345;1756;79590;8655;2904;51205;1389;10150;162239;25873;8820;6860;25953;4133;10146;10535;7701;26137;9414;162605;8636;623;27130;23583;7158;22907$GO:0043226!organelle!0.000162966112546714!348327;58506;51164;4924;9610;5245;2135;8086;27095;498;10806;4093;83699;5571;84276;5347;390;203068;7156;23026;6878;83746;1639;114789;56946;400720;8508;9859;116138;1677;27314;4724;6733;57532;4661;11103;400569;11345;1756;79590;8655;2904;51205;1389;10150;162239;25873;8820;6860;25953;4133;10146;10535;7701;26137;9414;162605;8636;623;27130;23583;7158;22907$GO:0015630!microtubule cytoskeleton!0.000401333421667501!84276;5347;51164;4133;203068;1639;8636;9859;27130;10806;8655$GO:0005515!protein binding!0.000512051560401762!51164;8522;9610;5245;23002;29882;498;4093;5347;22903;203068;3479;8450;10928;6091;23026;6878;83746;1639;114798;26191;116138;1677;4201;6733;57532;4661;11103;114131;785;2662;400569;11345;1756;653;8655;666;2904;51205;1389;3782;25873;6860;4133;23558;10146;26137;9414;2566;8636;7043;27130;23583;7158$GO:0043231!intracellular membrane-bound organelle!0.000512051560401762!348327;58506;51164;4924;5245;2135;8086;27095;498;4093;83699;5571;84276;5347;390;7156;23026;6878;83746;114789;56946;400720;8508;1677;116138;27314;4724;6733;4661;57532;11103;400569;11345;2904;51205;1389;10150;162239;25873;8820;6860;25953;10146;10535;7701;26137;9414;8636;27130;623;23583;7158;22907$GO:0043227!membrane-bound organelle!0.000512051560401762!348327;58506;51164;4924;5245;2135;8086;27095;498;4093;83699;5571;84276;5347;390;7156;23026;6878;83746;114789;56946;400720;8508;1677;116138;27314;4724;6733;4661;57532;11103;400569;11345;2904;51205;1389;10150;162239;25873;8820;6860;25953;10146;10535;7701;26137;9414;8636;27130;623;23583;7158;22907$GO:0044446!intracellular organelle part!0.000512051560401762!51164;11103;5245;2135;8086;400569;11345;498;10806;8655;4093;84276;5347;25873;390;4133;203068;23026;6878;1639;162605;8636;114789;9859;27130;8508;116138;23583;27314;4724;7158$GO:0044422!organelle part!0.000512051560401762!51164;11103;5245;2135;8086;400569;11345;498;10806;8655;4093;84276;5347;25873;390;4133;203068;23026;6878;1639;162605;8636;114789;9859;27130;8508;116138;23583;27314;4724;7158$GO:0044464!cell part!0.00078849886496396!348327;8522;10050;8086;27095;152831;10495;498;10806;4325;4093;83699;79877;54885;4190;57549;7156;10928;6091;23026;54958;83746;1639;114789;56946;400720;26191;8508;9859;57393;116138;1677;27314;4201;440533;57532;374986;785;11068;1756;4836;1389;162239;25873;8820;6860;5172;10535;7701;26137;9414;8636;196500;58506;51164;4924;9610;1268;5245;23002;2135;11141;197258;29882;84276;5571;5347;390;2813;203068;8450;115827;6878;778;114798;4724;6733;4661;11103;6098;400569;11345;79590;8655;2904;51205;10150;3782;4133;25953;10146;2566;162605;623;27130;23583;7158;22907$GO:0005622!intracellular!0.00078849886496396!348327;8522;8086;27095;10495;498;10806;4093;83699;79877;54885;4190;7156;10928;23026;83746;1639;114789;56946;400720;26191;8508;9859;116138;1677;27314;4201;57532;1756;4836;1389;162239;25873;8820;6860;10535;7701;26137;9414;8636;58506;51164;4924;5245;9610;23002;2135;197258;29882;84276;5571;5347;390;203068;8450;6878;4724;6733;4661;11103;400569;11345;79590;8655;2904;51205;10150;4133;25953;10146;162605;27130;623;23583;7158;22907$GO:0043228!non-membrane-bound organelle!0.00078849886496396!57532;51164;11103;9610;11345;1756;79590;10806;8655;84276;5347;25873;4133;203068;7156;23026;1639;162605;8636;27130;9859;116138;23583;7158$GO:0043232!intracellular non-membrane-bound organelle!0.00078849886496396!57532;51164;11103;9610;11345;1756;79590;10806;8655;84276;5347;25873;4133;203068;7156;23026;1639;162605;8636;27130;9859;116138;23583;7158$GO:0048731!system development!0.00106339066473168!4661;8522;2662;1756;653;8820;3479;57549;23026;6091;1639;778;114798;7043;4724;4201$GO:0032502!developmental process!0.00109513346759709!6733;4661;8522;5245;2662;10495;1756;653;8655;666;4836;8820;203068;3479;57549;6091;23026;1639;778;7043;114798;27130;26191;1677;4724;4201$GO:0044430!cytoskeletal part!0.00112337448922095!84276;5347;51164;4133;203068;23026;1639;162605;8636;9859;27130;10806;8655$GO:0005856!cytoskeleton!0.00180285872043605!84276;5347;51164;4133;9610;203068;23026;1639;11345;162605;8636;1756;9859;27130;10806;8655$GO:0048856!anatomical structure development!0.00196011158350793!4661;8522;2662;10495;1756;653;8655;8820;3479;57549;23026;6091;1639;778;7043;114798;4724;4201$GO:0005634!nucleus!0.00365286731096539!348327;58506;51164;5245;8086;4093;83699;5571;84276;5347;7156;23026;6878;83746;56946;400720;116138;1677;6733;4661;57532;11103;400569;10150;1389;162239;8820;25873;25953;10146;10535;7701;9414;26137;8636;27130;23583;7158$GO:0005874!microtubule!0.00405469341800519!84276;1639;4133;27130;9859;8655;203068$GO:0007275!multicellular organismal development!0.00512359573025957!4661;8522;2662;1756;653;4836;8820;3479;57549;6091;23026;1639;778;7043;114798;27130;26191;4724;4201$GO:0007399!nervous system development!0.00887965296385569!4661;8820;8522;57549;23026;6091;778;1639;114798;4724$GO:0031981!nuclear lumen!0.027246144113128!4093;25873;11103;5245;400569;23026;6878;23583;7158$GO:0007179!transforming growth factor beta receptor signaling pathway!0.027246144113128!4093;7043;2662$GO:0044444!cytoplasmic part!0.027246144113128!57532;51164;4924;5245;2135;27095;11345;10495;1756;79590;498;10806;2904;51205;5347;25873;390;6860;25953;4190;23026;8636;114789;623;8508;1677;27314;4724;22907$GO:0005813!centrosome!0.0401709278767649!5347;51164;8636;10806 | |||
|gostat_on_mara_mm9=GO:0005159!insulin-like growth factor receptor binding!0.00338386099420112!16000;16002$GO:0018445!prothoracicotrophic hormone activity!0.00338386099420112!16000;16002$GO:0005743!mitochondrial inner membrane!0.0106084692549911!108037;66075;233870;12867;18673;19299$GO:0019866!organelle inner membrane!0.0106084692549911!108037;66075;233870;12867;18673;19299$GO:0043231!intracellular membrane-bound organelle!0.0106084692549911!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;228790;237911;17261;78294;66075;71765;19299;28080;217734;12867;106369;93739;67707;15209;12455;330959;263764;69724;21873;20623;71726$GO:0031966!mitochondrial membrane!0.0106084692549911!108037;66075;233870;12867;18673;19299$GO:0043227!membrane-bound organelle!0.0106084692549911!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;228790;237911;17261;78294;66075;71765;19299;28080;217734;12867;106369;93739;67707;15209;12455;330959;263764;69724;21873;20623;71726$GO:0044444!cytoplasmic part!0.0106084692549911!108037;28080;217734;233870;12867;18673;58193;27096;12298;66340;93739;67707;14874;18571;17449;319195;263764;78294;66075;19299$GO:0009059!macromolecule biosynthetic process!0.0106084692549911!18107;217734;233870;319195;16000;263764;12298;78294;67707$GO:0031975!envelope!0.0106084692549911!108037;66075;233870;211586;12867;18673;19299$GO:0031967!organelle envelope!0.0106084692549911!108037;66075;233870;211586;12867;18673;19299$GO:0009058!biosynthetic process!0.0106084692549911!19082;18107;28080;217734;233870;319195;16000;263764;12298;78294;211347;67707$GO:0005740!mitochondrial envelope!0.0106084692549911!108037;66075;233870;12867;18673;19299$GO:0031090!organelle membrane!0.011259404442889!108037;233870;12867;18673;27096;66075;93739;19299$GO:0044424!intracellular part!0.012168564374044!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;218194;228790;17449;237911;17261;78294;66075;71765;19299;28080;217734;12867;12298;106369;93739;67707;18107;18571;15209;12455;330959;263764;319195;69724;21873;211347;20623;71726$GO:0044249!cellular biosynthetic process!0.012168564374044!19082;28080;233870;319195;16000;263764;12298;78294;211347;67707$GO:0044429!mitochondrial part!0.0195583898072105!108037;66075;233870;12867;18673;19299$GO:0005622!intracellular!0.0276452679359101!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;218194;228790;17449;237911;17261;78294;66075;71765;19299;28080;217734;12867;12298;106369;93739;67707;18107;18571;15209;12455;330959;263764;319195;69724;21873;211347;20623;71726$GO:0043229!intracellular organelle!0.0347853342387892!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;228790;237911;17261;78294;66075;71765;19299;28080;217734;12867;106369;93739;67707;15209;12455;330959;263764;319195;69724;21873;20623;71726$GO:0043226!organelle!0.0347853342387892!108037;233870;18673;58193;27096;66340;18749;14390;211586;70122;14874;19082;228790;237911;17261;78294;66075;71765;19299;28080;217734;12867;106369;93739;67707;15209;12455;330959;263764;319195;69724;21873;20623;71726 | |||
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|motif_activities_mm9=-0.655716152324,0.415245788893,0.921398540745,1.22763086022,0.973905034181,0.48327800248,0.943089501301,0.0792462752557,-1.04501656259,-1.08698856754,-0.142324396276,-0.168471613406,-0.204121997683,-0.184833858656,0.491533000527,0.902255664274,1.20895642502,-0.02643528587,0.230675216775,1.17071503048,-2.7865703865,-0.164573761118,-0.222097427999,1.06648244877,0.621723179717,1.32279243254,1.26147229129,1.47309170227,1.81208367749,1.48528620508,0.958342730177,0.200272622777,0.166893265991,0.160245733328,1.02906633854,0.951143545708,0.690899464669,0.220766673853,0.411232942297,0.88660049766,-0.527327128069,0.246882921037,0.250966150045,1.00448747625,1.13301315299,0.46790653528,-1.04934261864,-0.0770831153509,0.418089341233,0.950024799328,-0.388605039921,-0.734032754201,0.109731514472,-0.997085543998,-0.662099592517,-0.565977352573,-1.33748108388,-0.54053566171,0.0738924848593,-0.176994624062,-0.0767235545788,-1.18468273181,-1.04824579475,0.406714933416,0.577366598844,0.321333028736,-0.444286429664,-0.540053656035,0.0630736326967,-0.0779065951273,-0.618724165429,-1.01224104192,-0.298072672366,-0.0699094091702,-0.312244710834,-0.0992673626425,0.423186819654,1.04064946558,1.21564517332,-0.381770563808,0.238501796572,-0.123465346489,0.495941268611,0.0832435143239,0.748933787211,-0.600706243204,0.0294477102302,-0.236795544002,-0.553666346227,-0.467756871956,-0.571055166396,0.843430692994,1.30087483795,2.93702015444,2.75333411064,2.08053707864,-0.809476291691,-0.661852100173,-0.533184833971,-0.723379396537,-1.04879059223,-1.4236909647,-2.01338632638,-2.2634863184,1.35039480828,1.46191421491,1.98902206449,-0.966008468766,0.252958625435,-0.121035240494,0.501631410676,1.35647661665,0.794842407238,0.915388704978,0.444400934741,0.577460263502,0.832448918165,0.344561453532,-0.697581935622,-0.117153559468,-0.0099829754086,0.681093187125,0.0409914796389,0.0391851721318,1.30413423785,1.90120292216,-0.248832252549,-0.576730288436,0.415705613137,-0.877399996177,-0.584177231625,-0.536782244969,0.344182619276,0.577554024793,0.390969283438,0.428445947909,-0.250082784788,-0.901348680156,-1.24007184178,0.527767061557,-0.177325474106,-0.0996622908098,-0.108733769089,0.438804006528,-0.563526359811,0.00154127854907,0.0750052987202,0.539038177624,-0.876842508221,-0.956136197032,-0.795877960251,-0.371576836227,-0.346699876758,-1.64008384459,-1.44570430579,-0.479763342455,0.323760524037,0.732015172812,0.399883551957,-0.245756335126,0.0316184872051,0.340364820443,0.0023699982411,0.0930207168507,0.664365354908,0.39324299176,-0.19750975614,-0.267917612433,-0.124688131157,0.0507519334046,-0.059994270853,0.363245117316,0.375394744939,-0.264490087221,-0.183774387145,-0.138777641616,2.41748369748,0.868841941169,-0.498375841224,-0.564802077825,-0.32702505899,-0.060360365139,0.0728760642143,-0.111432539995,2.64158941802,1.09476385861,0.644057971086,0.371091794957,1.33515736286,2.50994909726,1.65659861655,2.05890474347,-0.640038653777,-0.528502317828,-1.09595145013,-1.02300189988,-1.17924268192,-1.36407305437,-0.621439965244,-0.0130261387865,0.31441255725,-0.101570737857,1.96580963179,1.061125144,1.20592984966,1.48155156225,1.17238570612,1.46393189145,0.396398754194,1.11398313808,1.46972573041,1.37315024769,2.27579337242,1.01268916537,1.37997482417,1.99829783286,1.36159175555,1.85628967189,-0.996740590354,-0.718171886056,-0.376576190934,-0.27314484462,-0.30118108702,-0.583029052529,-0.534325392442,-0.541055344716,-0.99619116903,-0.473887101081,-1.44068218926,-0.658833836746,-0.16332378385,-0.233678413511,2.22675632404,0.987491732213,0.129258028197,-0.0840167053429,0.187036776623,0.670725172972,-1.1558450528,0.596163363496,-0.853053077589,-0.531532688849,-1.02693201335,-0.750567516349,-0.665785325281,-1.57281827799,-0.609187369375,-1.06960620331,-0.906063392303,-0.46516447085,-0.406526363473,-0.650582875172,-0.617707871129,-0.403779572746,2.47151932486,-0.41576762286,0.0718276318013,0.403486828101,0.0251905164772,-0.148276134199,0.00494221899764,1.28636978153,1.47723302751,0.842159845554,2.09376905029,2.40539659159,1.94977552392,-0.589434238144,-0.765080933771,0.487840605576,-0.207552346143,0.698751623722,1.71020452496,1.50764122233,-0.850238876888,-0.479165954848,-0.358010770268,-1.4401845389,-0.979842873227,-1.39650508089,-0.800814518508,-0.575987775783,2.21803687763,-0.344775798779,0.419507034495,0.136503142092,0.241141206015,1.21530255648,1.62942253799,0.378563979608,-0.455038765055,-0.369681856667,-0.485917132986,1.7515179993,-0.256315227502,-0.224566495965,-0.0769351483314,0.0258496622808,-0.430187795352,-0.615521093231,-1.10271673623,0.558583312622,1.23061945352,-0.243564970516,-5.28453676988,-0.668808320881,-0.25491355736,0.0475230785938,0.175731427282,0.361176197237,-0.099227289424,-0.578958696836,-0.83654058393,-2.85207787224,-3.88977220041,-0.20713317065,-0.206339900296,0.107965526285,-0.119445790429,-0.109756095286,-0.171966372022,-0.707680271024,-0.394614342459,-0.256626899422,-0.635356366851,-0.305879177924,0.022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| |||
|name=ARID5B.p1 | |name=ARID5B.p1 | ||
|weight_matrix=NA:ARID5B.p1;PO:A:C:G:T;01:98.166042:20.550376:28.604793:7.679277;02:101.46895:8.177026:5.621097:39.733415;03:10.529059:72.324851:33.73686:38.409718;04:17.588651:71.133789:9.572003:56.706045;05:118.501502:9.88953:3.974026:22.63543;06:32.019721:85.664105:15.143331:22.173331;07:151.774602:0.675161:0.987781:1.562944;08:143.257904:2.014586:3.612778:6.11522;09:9.484798:22.0038:6.328728:117.183162;10:119.788278:8.932785:6.806574:19.472851;11:9.299807:101.603427:7.535435:36.561819;12:54.716748:68.773836:5.402641:26.107263;13:64.073197:55.881997:32.519371:2.525923;14:111.852517:25.149019:15.058825:2.940127 | |weight_matrix=NA:ARID5B.p1;PO:A:C:G:T;01:98.166042:20.550376:28.604793:7.679277;02:101.46895:8.177026:5.621097:39.733415;03:10.529059:72.324851:33.73686:38.409718;04:17.588651:71.133789:9.572003:56.706045;05:118.501502:9.88953:3.974026:22.63543;06:32.019721:85.664105:15.143331:22.173331;07:151.774602:0.675161:0.987781:1.562944;08:143.257904:2.014586:3.612778:6.11522;09:9.484798:22.0038:6.328728:117.183162;10:119.788278:8.932785:6.806574:19.472851;11:9.299807:101.603427:7.535435:36.561819;12:54.716748:68.773836:5.402641:26.107263;13:64.073197:55.881997:32.519371:2.525923;14:111.852517:25.149019:15.058825:2.940127 | ||
}} | }} |
Latest revision as of 09:46, 17 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||||||||||||||||||||||||||||||||||
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