FFCP PHASE1:Mm9::chr1:135000115..135000141,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135000115..135000141,+ | |||
|description=CAGE_peak_at_chr1:135000115..135000141,+ | |description=CAGE_peak_at_chr1:135000115..135000141,+ | ||
|id=chr1:135000115..135000141,+ | |id=chr1:135000115..135000141,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.62e-09,3;DOID:4045,1.62e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002365!4.89e-10!25;UBERON:0002330!4.89e-10!25;UBERON:0007023!6.56e-08!51;UBERON:0005256!1.11e-07!47;UBERON:0001007!3.26e-07!128;UBERON:0001555!3.26e-07!128;UBERON:0007026!3.26e-07!128;UBERON:0002107!3.69e-07!22;UBERON:0007499!3.69e-07!22;UBERON:0006925!3.69e-07!22;UBERON:0009497!3.69e-07!22;UBERON:0000015!3.69e-07!22;UBERON:0002423!3.69e-07!22;UBERON:0006235!3.69e-07!22;UBERON:0008835!3.69e-07!22;UBERON:0003894!3.69e-07!22;UBERON:0004161!3.69e-07!22;UBERON:0008836!3.69e-07!22;UBERON:0004921!5.01e-07!126;UBERON:0004185!5.01e-07!126;UBERON:0004119!6.31e-07!130;UBERON:0000925!6.31e-07!130;UBERON:0006595!6.31e-07!130 | |ontology_enrichment_uberon=UBERON:0002365!4.89e-10!25;UBERON:0002330!4.89e-10!25;UBERON:0007023!6.56e-08!51;UBERON:0005256!1.11e-07!47;UBERON:0001007!3.26e-07!128;UBERON:0001555!3.26e-07!128;UBERON:0007026!3.26e-07!128;UBERON:0002107!3.69e-07!22;UBERON:0007499!3.69e-07!22;UBERON:0006925!3.69e-07!22;UBERON:0009497!3.69e-07!22;UBERON:0000015!3.69e-07!22;UBERON:0002423!3.69e-07!22;UBERON:0006235!3.69e-07!22;UBERON:0008835!3.69e-07!22;UBERON:0003894!3.69e-07!22;UBERON:0004161!3.69e-07!22;UBERON:0008836!3.69e-07!22;UBERON:0004921!5.01e-07!126;UBERON:0004185!5.01e-07!126;UBERON:0004119!6.31e-07!130;UBERON:0000925!6.31e-07!130;UBERON:0006595!6.31e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.91e-13,25;UBERON:0002330,1.91e-13,25;UBERON:0003100,5.59e-11,11;UBERON:0005256,1.27e-10,45;UBERON:0000161,5.18e-09,5;UBERON:0002107,2.26e-08,22;UBERON:0007499,2.26e-08,22;UBERON:0006925,2.26e-08,22;UBERON:0009497,2.26e-08,22;UBERON:0000015,2.26e-08,22;UBERON:0002423,2.26e-08,22;UBERON:0006235,2.26e-08,22;UBERON:0008835,2.26e-08,22;UBERON:0003894,2.26e-08,22;UBERON:0004161,2.26e-08,22;UBERON:0008836,2.26e-08,22;UBERON:0009854,6.10e-08,23;UBERON:0009856,6.10e-08,23;UBERON:0007023,1.52e-07,51;UBERON:0010147,4.26e-07,2;UBERON:0003937,4.26e-07,2;UBERON:0005399,4.26e-07,2;UBERON:0003104,5.45e-07,61;UBERON:0009142,5.45e-07,61;UBERON:0000474,6.48e-07,9;UBERON:0001911,9.27e-07,2;UBERON:0000076,9.27e-07,2;UBERON:0005333,9.27e-07,2;UBERON:0008425,9.27e-07,2;UBERON:0005311,9.27e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,11.7188856606334,5.4693474116666,8.89990364755457,12.9410927366823,9.56263678941824,8.73918635456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0.679971333707751,2.69851595818909,4.54843492213368,5.37632264516803,0.280888840263504,0,0,0,0,0,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0.505445516867349,2.94618598241064,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.624075346229121,3.53610429125956,1.79397413521912,2.8946611281802,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,6.39293554924747,5.79467167239938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,1.64970122972535,0,0,0,0,0,0,0,0,0,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,12.7906470871878,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0.341741761595705,0,0.555583582109135,0,0,0,0,0,0,1.90934123603023,0,0,0,0.209088296014469,0,0.404593039154462,0.247960367176008,1.57053565190418,0.259229946583586,11.1841076355647,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,1.13365191807606,0,0,0,0.19318959403219,1.87682475451182,3.11357761254351,1.2862102744744,10.5330141847426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0.157731082679119,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,11.7188856606334,5.4693474116666,8.89990364755457,12.9410927366823,9.56263678941824,8.73918635456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,0.679971333707751,2.69851595818909,4.54843492213368,5.37632264516803,0.280888840263504,0,0,0,0,0,0,0,0,0,1.01104889002957,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0.505445516867349,2.94618598241064,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63259991465583,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.624075346229121,3.53610429125956,1.79397413521912,2.8946611281802,0.739012760666419,0,0,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,6.39293554924747,5.79467167239938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0,0,1.64970122972535,0,0,0,0,0,0,0,0,0,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0,12.7906470871878,0.32977250588296,0,0.0603129249281559,0.358117032009409,0.492422699235184,0,0,0.341741761595705,0,0.555583582109135,0,0,0,0,0,0,1.90934123603023,0,0,0,0.209088296014469,0,0.404593039154462,0.247960367176008,1.57053565190418,0.259229946583586,11.1841076355647,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,1.13365191807606,0,0,0,0.19318959403219,1.87682475451182,3.11357761254351,1.2862102744744,10.5330141847426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr1:135000115..135000141,+ | |short_description=p@chr1:135000115..135000141,+ | ||
}} | }} |
Latest revision as of 19:14, 4 August 2015
Short description: | p@chr1:135000115..135000141, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135000115..135000141, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.91e-13 | 25 |
exocrine system | 1.91e-13 | 25 |
female organism | 5.59e-11 | 11 |
trunk mesenchyme | 1.27e-10 | 45 |
orifice | 5.18e-09 | 5 |
liver | 2.26e-08 | 22 |
epithelial sac | 2.26e-08 | 22 |
digestive gland | 2.26e-08 | 22 |
epithelium of foregut-midgut junction | 2.26e-08 | 22 |
anatomical boundary | 2.26e-08 | 22 |
hepatobiliary system | 2.26e-08 | 22 |
foregut-midgut junction | 2.26e-08 | 22 |
hepatic diverticulum | 2.26e-08 | 22 |
liver primordium | 2.26e-08 | 22 |
septum transversum | 2.26e-08 | 22 |
liver bud | 2.26e-08 | 22 |
digestive tract diverticulum | 6.10e-08 | 23 |
sac | 6.10e-08 | 23 |
adult organism | 1.52e-07 | 51 |
male accessory sex gland | 4.26e-07 | 2 |
sex gland | 4.26e-07 | 2 |
male reproductive gland | 4.26e-07 | 2 |
mesenchyme | 5.45e-07 | 61 |
entire embryonic mesenchyme | 5.45e-07 | 61 |
female reproductive system | 6.48e-07 | 9 |
mammary gland | 9.27e-07 | 2 |
external ectoderm | 9.27e-07 | 2 |
mammary bud | 9.27e-07 | 2 |
mammary ridge | 9.27e-07 | 2 |
mammary placode | 9.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.62e-09 | 3 |
muscle cancer | 1.62e-09 | 3 |