Swissregulon:GCM1,2.p1: Difference between revisions
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(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=GCM1,2.p1
|associated_transcription_factors=1.000:8521:GCM1:glial cells missing homolog 1 (Drosophi...") |
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:8521:GCM1:glial cells missing homolog 1 (Drosophila)::NM_003643:hGCMa;0.893:9247:GCM2:glial cells missing homolog 2 (Drosophila)::NM_004752:hGCMb | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0032501!multicellular organismal process!9.57555631223712e-06!7474;2054;7080;2288;358;2535;5881;4842;4915;4606;4155;258;3881;1482;1280;7475;1462;7469;4804;7075;70;3225;5090;6261;786;7432;92737;1021;3736;388585;5149;147;9627;1264;9569;7481;10753;1188$GO:0048856!anatomical structure development!3.47499339447656e-05!7474;2054;5090;7080;2535;5881;4628;4915;4155;27019;258;92737;3881;1021;54873;388585;1280;1482;147;51079;4804;7481;7075;70$GO:0032502!developmental process!5.80043538750046e-05!7474;2054;7080;2288;2535;5881;4915;4155;258;3881;54873;1482;1280;7475;1462;51079;7469;4804;7075;70;3225;9274;5090;4628;27019;92737;1021;388585;147;9569;7481;2932$GO:0005578!proteinaceous extracellular matrix!6.74301587190239e-05!7474;1280;7475;1462;8076;4969;23768;171019;7448;7481;7148;258$GO:0006936!muscle contraction!9.11907759114066e-05!4606;70;6261;7432;4842;3736;786;1264$GO:0003012!muscle system process!9.11907759114066e-05!4606;70;6261;7432;4842;3736;786;1264$GO:0007275!multicellular organismal development!9.11907759114066e-05!7474;2054;5090;7080;2288;2535;4915;4155;258;92737;3881;1021;388585;1280;1482;7475;1462;147;7469;9569;4804;7481;7075;70;3225$GO:0005515!protein binding!0.000247202968796819!7474;2054;894;57611;7080;22895;9478;2288;26038;2535;7448;5881;4842;4915;4606;79586;10188;3881;1482;257194;11278;80271;10579;51079;81611;118987;4926;4978;4804;7148;5066;70;25802;11127;3225;5269;57520;54788;22998;7360;5090;4969;23768;10919;4628;9815;7432;7336;92737;1021;3736;26224;9627;1264;26137;9569;8496;55756;6603;2932$GO:0044424!intracellular part!0.000487490028083295!79085;7080;22895;7289;2288;23492;4606;79586;3881;7881;11278;80271;51079;89795;57060;25802;1488;51144;7360;4969;11041;4720;27019;10882;4199;7336;55893;9627;26137;23646;79695;6603;2054;894;66005;9478;26038;5881;92595;23209;26268;10188;54873;1280;1482;10579;81611;79618;7469;4926;4804;70;5066;3225;11127;8867;5269;57520;5090;51102;6261;10919;4628;3712;9815;23464;4139;92737;1021;340542;388585;27303;26224;81890;9569;53354;55756;2932$GO:0005737!cytoplasm!0.000617096264605642!2054;79085;66005;22895;9478;2288;5881;4606;23209;79586;10188;54873;7881;1280;80271;10579;51079;81611;4804;57060;5066;70;25802;8867;5269;57520;51144;7360;51102;4969;6261;11041;4628;3712;4720;10882;23464;4139;4199;7336;92737;1021;340542;27303;26224;55893;9627;81890;53354;23646;79695;2932$GO:0044464!cell part!0.00104669721477989!79085;7080;22895;7289;2288;358;2535;4842;23492;4606;79586;3881;7881;5412;257194;11278;80271;51079;54805;89795;84695;7148;7075;57060;25802;26011;54788;1488;51144;7360;4969;23768;11041;786;4720;27019;10882;4199;7432;7336;3736;55893;9627;283554;26137;138311;23646;10753;79716;8496;79695;6603;7474;2054;894;66005;9478;26038;5881;92595;4915;4155;23209;26268;10188;54873;9911;23467;1482;1280;10579;81611;79618;7469;4926;4978;4804;440435;5066;70;51374;3225;11127;8867;5269;57520;6330;5090;51102;6261;171019;10919;4628;3712;23464;9815;4139;92737;1021;340542;27303;388585;26224;147;81890;5142;9569;53354;6540;1188;55756;2932$GO:0016043!cellular component organization and biogenesis!0.0021759931102128!2054;22998;5090;22895;2288;10919;26038;5881;4628;23492;27019;4139;92737;10188;54873;147;51079;9627;4926;1264;4804;7148;70;11127;8867;6603;2932$GO:0009653!anatomical structure morphogenesis!0.00313034797866245!7474;2054;1482;7080;51079;147;2535;5881;4628;4804;7481;27019;70;258;54873$GO:0005622!intracellular!0.00530498062064678!79085;7080;22895;7289;2288;23492;4606;79586;3881;7881;5412;11278;80271;51079;89795;7148;57060;25802;1488;51144;7360;4969;11041;4720;27019;10882;4199;7336;55893;9627;26137;23646;10753;79716;79695;6603;2054;894;66005;9478;26038;5881;92595;23209;26268;10188;54873;1280;1482;10579;81611;79618;7469;4926;4804;70;5066;3225;11127;8867;5269;57520;5090;51102;6261;171019;10919;4628;3712;9815;23464;4139;92737;1021;340542;388585;27303;26224;81890;9569;53354;55756;2932$GO:0048513!organ development!0.00680402505603461!7474;2054;1482;1280;5090;7080;147;4804;7075;70;258;92737;1021;3881;388585$GO:0031032!actomyosin structure organization and biogenesis!0.00680402505603461!22998;70;1264$GO:0048731!system development!0.00680402505603461!7474;2054;5090;7080;4915;4155;258;92737;1021;3881;388585;1280;1482;147;4804;70;7075$GO:0043121!neurotrophin binding!0.0119440914289892!4804;4915$GO:0048522!positive regulation of cellular process!0.0119440914289892!23034;1482;894;7080;51079;147;4804;7432;10188;1021;5149;2932$GO:0006996!organelle organization and biogenesis!0.0119440914289892!22998;10919;26038;5881;23492;4139;10188;51079;1264;4926;7148;70;11127;6603$GO:0003008!system process!0.0131660357645204!1280;6261;147;358;9627;5881;4842;786;1264;4606;4155;70;1188;7432;3736;5149$GO:0009888!tissue development!0.0171861659635196!2054;4804;7075;7080;258;3881;1021$GO:0042995!cell projection!0.0175343040421017!27019;92737;5881;4842;1021;4926$GO:0007512!adult heart development!0.0175343040421017!1482;147$GO:0007267!cell-cell signaling!0.0175343040421017!7474;7475;147;9627;2535;4842;4155;7481;7432;3736$GO:0016055!Wnt receptor signaling pathway!0.0175343040421017!7474;7475;7481;2535;2932$GO:0043025!cell soma!0.018146591866056!9627;92737;4926$GO:0044264!cellular polysaccharide metabolic process!0.018146591866056!66005;11041;147;2932$GO:0044421!extracellular region part!0.018146591866056!7474;1280;7475;1462;8076;4969;23768;171019;7448;7481;7148;258$GO:0005976!polysaccharide metabolic process!0.018146591866056!66005;11041;147;2932$GO:0030496!midbody!0.018146591866056!2054;4628$GO:0000307!cyclin-dependent protein kinase holoenzyme complex!0.018146591866056!894;1021$GO:0000299!integral to membrane of membrane fraction!0.018146591866056!23209;147$GO:0048518!positive regulation of biological process!0.0187231979952269!23034;1482;894;7080;51079;147;4804;7432;10188;1021;5149;2932$GO:0007223!Wnt receptor signaling pathway, calcium modulating pathway!0.0192757066951406!7474;7475;7481$GO:0007010!cytoskeleton organization and biogenesis!0.0215523604437135!22998;5881;1264;7148;70;4139;11127;10188$GO:0043229!intracellular organelle!0.02163704915569!79085;7080;22895;7289;2288;23492;4606;79586;3881;11278;80271;51079;89795;25802;1488;51144;4969;11041;4720;27019;7336;55893;26137;23646;79695;6603;894;2054;66005;9478;26038;92595;23209;1482;10579;81611;79618;4926;7469;4804;70;5066;3225;11127;5090;51102;6261;10919;4628;3712;9815;23464;4139;92737;1021;388585;26224;81890;9569;55756;2932$GO:0043226!organelle!0.02163704915569!79085;7080;22895;7289;2288;23492;4606;79586;3881;11278;80271;51079;89795;25802;1488;51144;4969;11041;4720;27019;7336;55893;26137;23646;79695;6603;894;2054;66005;9478;26038;92595;23209;1482;10579;81611;79618;4926;7469;4804;70;5066;3225;11127;5090;51102;6261;10919;4628;3712;9815;23464;4139;92737;1021;388585;26224;81890;9569;55756;2932$GO:0009887!organ morphogenesis!0.0267648449994724!2054;1482;4804;7080;70;258;147$GO:0000902!cell morphogenesis!0.0277787940117415!2054;51079;147;5881;4628;4804;27019;54873$GO:0032989!cellular structure morphogenesis!0.0277787940117415!2054;51079;147;5881;4628;4804;27019;54873$GO:0005583!fibrillar collagen!0.0277787940117415!1280;7148$GO:0005539!glycosaminoglycan binding!0.0345178293946684!1462;7148;3273;7448$GO:0000267!cell fraction!0.0401325759310567!7474;2054;147;5142;4842;786;23209;25802;1188;7432;3736$GO:0030247!polysaccharide binding!0.0401325759310567!1462;7148;3273;7448$GO:0035295!tube development!0.0405204202853532!7474;1482;7080;147$GO:0044430!cytoskeletal part!0.0435391738688175!10579;9478;4628;4926;27019;4606;70;11127;3881$GO:0005201!extracellular matrix structural constituent!0.0466517582681105!1280;7475;8076;258 | |||
|gostat_on_mara_mm9=GO:0021680!cerebellar Purkinje cell layer development!0.043711647555432!67269;19883;77579$GO:0030902!hindbrain development!0.043711647555432!67269;18012;19883;77579$GO:0007420!brain development!0.043711647555432!67269;21869;18012;20698;14682;19883;77579$GO:0021695!cerebellar cortex development!0.043711647555432!67269;19883;77579 | |||
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|motif_activities_mm9=1.09043284798,-1.77359102452,-1.95708190578,-1.65477804288,-1.59124258588,-0.960159806864,-1.03055070569,-2.26156651343,-1.36533847523,-1.20214458761,-1.5143779432,-0.97394997645,-2.45331027958,-2.2650466495,-1.13017421256,-1.33025011119,-1.13593489273,-2.30680852045,-2.19076848576,-2.3077456206,0.205770771382,-1.63420129178,-1.42355013755,-1.59327284936,-1.41655985608,-1.77625640575,-1.6319285862,-1.37195560335,-1.0642664583,-0.915501777616,-1.08358593001,-0.389013506601,-0.0644027747676,-0.443241235304,-1.08621878123,-0.869525718777,-1.08747641792,-2.9378052469,-2.44567157421,-2.57255711924,-3.77286508512,-3.75331135125,-3.25348348357,0.802276272465,0.770858466173,1.17625608999,0.993534474207,0.60936939747,1.07950261259,0.802068089166,1.41934542423,0.663835307367,-2.35077086237,-2.28789059475,-2.00721140447,1.10704302162,0.949459512919,0.578382282151,-0.438430254743,-0.548421813051,0.0387548563791,1.27500705093,1.19827478212,0.309940287255,-0.085314004981,0.0836486794785,0.730069865312,0.57826768965,0.360307286468,0.264985910301,0.365220611295,-0.153383104197,-0.0731834316791,-0.0617904512831,0.00902952509119,-0.0598360210624,0.281083579065,-0.051180200709,-0.055567441221,-0.396218735967,-0.372966406991,-0.610255720609,0.654213086068,0.242095826045,0.413812482951,-0.822002200488,-0.706680652212,-1.0148651802,-0.0532564645778,0.175449379286,0.136460373161,0.92734796543,0.256119336712,0.325855859889,0.511449605898,-0.00811071925802,1.16645722591,1.1669118621,0.909993467112,0.686595518408,-0.19010790299,0.4745554513,0.672165286521,-0.354263514965,0.116420182497,0.17098768036,0.118795081585,0.014123252449,-1.05665039771,0.56321760453,-0.0873882071502,0.490736729232,0.6167149616,0.508224069732,0.557128617186,0.502229093631,-0.0382647603009,1.94135111059,0.0236210478165,1.72623498929,0.630062231179,-0.0625631038719,-0.201587348536,-0.793011127832,-0.475435293992,-0.469497805995,-1.53540865903,-1.25570016523,-1.23819123374,-0.430493555601,0.911296429062,-0.733948859851,0.431473543803,0.228579526299,-0.0687395929201,0.0664514977707,0.813784312727,0.091557684384,-0.0483925341651,1.59709356709,-0.150184819703,0.310871186187,0.388831890532,0.483058055557,0.413783171141,0.298258621075,0.646473955789,0.728229569888,0.0114421440666,0.0153867959655,0.0999212337395,0.834422810925,0.274168759509,1.1769875164,1.15209296219,0.0221364212679,-0.69273869997,-1.13022089706,-1.02223599323,0.524928165646,0.542582148311,0.352847523784,0.728275733365,0.516718606786,0.460830437899,0.416666921257,0.716072666372,0.64078594985,0.385503428623,0.550164106951,0.881116462938,0.702331388738,1.20651793861,1.02236651825,0.478206230211,-0.12858576658,-1.68657754327,-0.269595269004,-0.577487009965,-0.606650362174,0.143837487302,-0.0883178369879,-0.268982358311,0.4230804688,-0.38866671104,0.0792585081548,-0.0932683699915,-0.0931266139272,-0.285618207746,-0.592902711744,-0.273732025902,-0.39298214221,-0.0696465856224,-0.398661564871,-0.29706654405,-0.15937864644,0.155144826295,-0.122282991809,0.0648160850931,-0.324540823094,0.134415421845,-0.0563609252377,0.546187248605,-0.359964579713,-0.295376245113,-0.359583504265,-0.409825774173,-0.101599477102,0.0661331042407,0.226833616582,0.310743477743,0.641972459541,1.2607954956,0.740754088907,0.929229475714,0.791594389843,0.689285666311,0.180351311747,0.186329651708,0.273476160094,0.125288112137,-0.135756826489,-0.195957601322,-0.0260833552776,-0.146689622529,-0.0868753307959,0.207774743043,0.235797794273,0.661697931586,0.173563022785,0.399522383927,0.255130376074,-1.57139491568,-1.41919534122,0.219202472938,0.746195159598,0.222112281417,-0.142498630579,0.318573779028,2.08923189867,-0.649787599298,-0.820641193721,-1.17869143312,-0.588647283537,-0.296222519538,-0.638881226307,-0.323683697487,-0.477060552668,-0.545806794954,-0.162112801347,0.604814511867,1.09329142601,0.771246766232,0.389069138437,1.20912169238,0.155814543218,0.429208944699,1.02194571388,1.82411871207,1.5553811752,1.14988334413,1.15725795969,1.2809132661,0.943800632233,0.848908408351,1.71386310544,1.84205526171,-0.511336630304,0.216945721136,0.187871614907,0.495535891423,0.856279585112,1.32052611534,2.73962230528,0.368884721191,0.281686291758,-0.120584078486,1.31503812641,1.31679297205,1.52051451254,1.464001456,1.23894110207,-0.833826201195,0.0976183182583,-0.85384261025,-0.0388737675019,-0.227019809286,-1.0188092993,-1.12460614764,-1.28672153475,-1.47909480614,-1.73956976755,-1.51989165291,0.147690026608,-0.361026077544,0.290989238752,0.235897824324,0.381904566683,0.594579301332,0.718417516888,1.00932432212,0.87709447516,-0.73068381514,-0.278875790051,-0.844330458806,0.115533479138,0.113626711676,0.718290607591,0.964706531934,1.0127183419,0.870536659655,0.939062440295,0.373719717262,-0.730285104959,-0.268232231952,-1.8915752771,0.200969749143,-0.00020643934809,-0.581174809645,-0.623237405313,-1.02329848958,-1.33945919797,-1.58018149575,-1.36007180976,-1.58787283397,-1.88612312433,-1.97380723108,-1.99914995004,-2.092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| |||
|name=GCM1,2.p1 | |name=GCM1,2.p1 | ||
|weight_matrix=NA:GCM1,2.p1;PO:A:C:G:T;01:16.245196:54.022733:2.771335:5.699679;02:34.7184:20.262239:8.590542:15.167762;03:10.096124:27.428329:21.487978:19.726512;04:25.099485:4.719095:35.64661:13.273753;05:0:71.291007:2.884185:4.563751;06:0.775982:77.962961:0:0;07:11.581168:60.604648:0.82066:5.732467;08:14.451337:4.260446:39.612064:20.415096;09:1.347107:71.771019:4.913193:0.707624;10:74.665925:1.377315:0.87208:1.823623;11:0.86738:1.440176:8.151224:68.280163;12:4.663722:5.529978:28.045743:40.4995 | |weight_matrix=NA:GCM1,2.p1;PO:A:C:G:T;01:16.245196:54.022733:2.771335:5.699679;02:34.7184:20.262239:8.590542:15.167762;03:10.096124:27.428329:21.487978:19.726512;04:25.099485:4.719095:35.64661:13.273753;05:0:71.291007:2.884185:4.563751;06:0.775982:77.962961:0:0;07:11.581168:60.604648:0.82066:5.732467;08:14.451337:4.260446:39.612064:20.415096;09:1.347107:71.771019:4.913193:0.707624;10:74.665925:1.377315:0.87208:1.823623;11:0.86738:1.440176:8.151224:68.280163;12:4.663722:5.529978:28.045743:40.4995 | ||
}} | }} |
Latest revision as of 09:50, 17 April 2012
recognized by
- GCM1 ( EntrezGene:8521 )
- GCM2 ( EntrezGene:9247 )
(data source: http://www.swissregulon.unibas.ch/)
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||
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