FFCP PHASE1:Mm9::chr2:38469194..38469205,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38469194..38469205,- | |||
|description=CAGE_peak_at_chr2:38469194..38469205,- | |description=CAGE_peak_at_chr2:38469194..38469205,- | ||
|id=chr2:38469194..38469205,- | |id=chr2:38469194..38469205,- | ||
|ontology_enrichment_celltype=CL:0000473!3.62e-08!3;CL:0000627!3.62e-08!3;CL:0000682!3.62e-08!3 | |ontology_enrichment_celltype=CL:0000473!3.62e-08!3;CL:0000627!3.62e-08!3;CL:0000682!3.62e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.43e-22,3;CL:0000239,1.32e-18,6;CL:0000677,1.32e-18,6;CL:0000584,1.32e-18,6;CL:0000075,5.35e-16,7;CL:0000066,3.84e-13,25;CL:0002563,1.64e-12,9;CL:0002251,1.64e-12,9;CL:0000473,1.15e-09,7;CL:0000057,7.68e-08,1;CL:0000632,7.68e-08,1;CL:0002076,1.34e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!6.38e-08!3;UBERON:0000344!8.03e-07!15 | |ontology_enrichment_uberon=UBERON:0002465!6.38e-08!3;UBERON:0000344!8.03e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.34e-21,3;UBERON:0000344,2.90e-16,15;UBERON:0001962,8.97e-15,2;UBERON:0001961,8.97e-15,2;UBERON:0001744,8.97e-15,2;UBERON:0003350,1.64e-12,9;UBERON:0004808,1.64e-12,9;UBERON:0001277,1.64e-12,9;UBERON:0000485,2.77e-10,11;UBERON:0004923,4.54e-10,24;UBERON:0001242,9.74e-09,13;UBERON:0001262,9.74e-09,13;UBERON:0004786,9.74e-09,13;UBERON:0003199,2.16e-08,1;UBERON:0000029,6.57e-08,1;UBERON:0001097,6.57e-08,1;UBERON:0003968,6.57e-08,1;UBERON:0001467,6.57e-08,1 | |||
|phase1_expression=0,5.93258192986914,5.45999087267443,0,0,2.35030980676646,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,4.47978783821539,5.96464130774642,6.89078356938024,9.04600191934057,4.52489588640367,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,1.72084775396277,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,1.10295709559758,0.231867835620421 | |phase1_expression=0,5.93258192986914,5.45999087267443,0,0,2.35030980676646,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0,0,0,4.47978783821539,5.96464130774642,6.89078356938024,9.04600191934057,4.52489588640367,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,1.72084775396277,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.441683036920787,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,1.10295709559758,0.231867835620421 | ||
|short_description=p@chr2:38469194..38469205,- | |short_description=p@chr2:38469194..38469205,- | ||
}} | }} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr2:38469194..38469205, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38469194..38469205, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.43e-22 | 3 |
brush border epithelial cell | 1.32e-18 | 6 |
gut absorptive cell | 1.32e-18 | 6 |
enterocyte | 1.32e-18 | 6 |
columnar/cuboidal epithelial cell | 5.35e-16 | 7 |
epithelial cell | 3.84e-13 | 25 |
intestinal epithelial cell | 1.64e-12 | 9 |
epithelial cell of alimentary canal | 1.64e-12 | 9 |
defensive cell | 1.15e-09 | 7 |
fibroblast | 7.68e-08 | 1 |
hepatic stellate cell | 7.68e-08 | 1 |
endo-epithelial cell | 1.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.34e-21 | 3 |
mucosa | 2.90e-16 | 15 |
gut-associated lymphoid tissue | 8.97e-15 | 2 |
mucosa-associated lymphoid tissue | 8.97e-15 | 2 |
lymphoid tissue | 8.97e-15 | 2 |
epithelium of mucosa | 1.64e-12 | 9 |
gastrointestinal system epithelium | 1.64e-12 | 9 |
intestinal epithelium | 1.64e-12 | 9 |
simple columnar epithelium | 2.77e-10 | 11 |
organ component layer | 4.54e-10 | 24 |
intestinal mucosa | 9.74e-09 | 13 |
wall of intestine | 9.74e-09 | 13 |
gastrointestinal system mucosa | 9.74e-09 | 13 |
egg chamber | 2.16e-08 | 1 |
lymph node | 6.57e-08 | 1 |
axillary lymph node | 6.57e-08 | 1 |
peripheral lymph node | 6.57e-08 | 1 |
shoulder | 6.57e-08 | 1 |