Personal tools

FFCP PHASE1:Mm9::chr3:113277676..113277692,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11722
|EntrezGene=11722
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P00687
|UniProt=P00687
|association_with_transcript=0bp_to_ENSMUST00000106540,NM_007446,uc008rba.2_5end
|association_with_transcript=0bp_to_ENSMUST00000106540,NM_007446,uc008rba.2_5end
|cluster_id=chr3:113277676..113277692,-
|description=CAGE_peak_2_at_Amy1_5end
|description=CAGE_peak_2_at_Amy1_5end
|id=chr3:113277676..113277692,-
|id=chr3:113277676..113277692,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!1.16e-16!25;UBERON:0002330!1.16e-16!25;UBERON:0009854!2.26e-15!23;UBERON:0009856!2.26e-15!23;UBERON:0002107!5.52e-15!22;UBERON:0007499!5.52e-15!22;UBERON:0006925!5.52e-15!22;UBERON:0009497!5.52e-15!22;UBERON:0000015!5.52e-15!22;UBERON:0002423!5.52e-15!22;UBERON:0006235!5.52e-15!22;UBERON:0008835!5.52e-15!22;UBERON:0003894!5.52e-15!22;UBERON:0004161!5.52e-15!22;UBERON:0008836!5.52e-15!22;UBERON:0005177!1.03e-11!85;UBERON:0000466!4.29e-11!79;UBERON:0005172!6.77e-11!49;UBERON:0005173!6.77e-11!49;UBERON:0002417!6.77e-11!49;UBERON:0000916!6.77e-11!49;UBERON:0005256!1.44e-10!47;UBERON:0002100!3.23e-09!98;UBERON:0009569!7.68e-08!66;UBERON:0001045!7.83e-08!13;UBERON:0001264!1.88e-07!12;UBERON:0003922!1.88e-07!12;UBERON:0002114!1.88e-07!12;UBERON:0003923!1.88e-07!12;UBERON:0003924!1.88e-07!12;UBERON:0003921!1.88e-07!12;UBERON:0003914!2.39e-07!47;UBERON:0003104!4.05e-07!131;UBERON:0009142!4.05e-07!131;UBERON:0001041!7.00e-07!92;UBERON:0000077!7.86e-07!97
|ontology_enrichment_uberon=UBERON:0002365!1.16e-16!25;UBERON:0002330!1.16e-16!25;UBERON:0009854!2.26e-15!23;UBERON:0009856!2.26e-15!23;UBERON:0002107!5.52e-15!22;UBERON:0007499!5.52e-15!22;UBERON:0006925!5.52e-15!22;UBERON:0009497!5.52e-15!22;UBERON:0000015!5.52e-15!22;UBERON:0002423!5.52e-15!22;UBERON:0006235!5.52e-15!22;UBERON:0008835!5.52e-15!22;UBERON:0003894!5.52e-15!22;UBERON:0004161!5.52e-15!22;UBERON:0008836!5.52e-15!22;UBERON:0005177!1.03e-11!85;UBERON:0000466!4.29e-11!79;UBERON:0005172!6.77e-11!49;UBERON:0005173!6.77e-11!49;UBERON:0002417!6.77e-11!49;UBERON:0000916!6.77e-11!49;UBERON:0005256!1.44e-10!47;UBERON:0002100!3.23e-09!98;UBERON:0009569!7.68e-08!66;UBERON:0001045!7.83e-08!13;UBERON:0001264!1.88e-07!12;UBERON:0003922!1.88e-07!12;UBERON:0002114!1.88e-07!12;UBERON:0003923!1.88e-07!12;UBERON:0003924!1.88e-07!12;UBERON:0003921!1.88e-07!12;UBERON:0003914!2.39e-07!47;UBERON:0003104!4.05e-07!131;UBERON:0009142!4.05e-07!131;UBERON:0001041!7.00e-07!92;UBERON:0000077!7.86e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.12e-21,25;UBERON:0002330,6.12e-21,25;UBERON:0009854,3.55e-19,23;UBERON:0009856,3.55e-19,23;UBERON:0002107,1.23e-18,22;UBERON:0007499,1.23e-18,22;UBERON:0006925,1.23e-18,22;UBERON:0009497,1.23e-18,22;UBERON:0000015,1.23e-18,22;UBERON:0002423,1.23e-18,22;UBERON:0006235,1.23e-18,22;UBERON:0008835,1.23e-18,22;UBERON:0003894,1.23e-18,22;UBERON:0004161,1.23e-18,22;UBERON:0008836,1.23e-18,22;UBERON:0005256,2.12e-12,45;UBERON:0005177,6.47e-11,79;UBERON:0000949,1.71e-10,72;UBERON:0005172,4.00e-09,49;UBERON:0005173,4.00e-09,49;UBERON:0002417,4.00e-09,49;UBERON:0000916,4.00e-09,49;UBERON:0001264,8.59e-09,12;UBERON:0002100,1.50e-08,90;UBERON:0003104,2.85e-07,61;UBERON:0009142,2.85e-07,61;UBERON:0002530,3.22e-07,65;UBERON:0003914,8.29e-07,47
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,1.15945795480671,170.363927642315,80.9165887112223,232.612075595899,342.432171994922,297.937879919728,68.6773214444267,0,0,0,0,0,0,0,0,0,0,140.674539813882,0.258937883647172,3.41416919849097,0,0.913396434936424,3.68984795609694,1.80867168663147,4.23319345688537,13.4463252722753,0,72.7334765307156,2.65383165584962,0,0.441683036920787,0,3.72783522436244,0.585561594023094,0,10.2182822083437,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,2.86136032403214,0.505445516867349,1.05220927943237,0,0,0,1.05493372485001,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.405344047729279,0.438599962275997,0.658650345873152,1.61047702512446,0,0,7.59963200862735,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,1.14135375667535,0,0.164698954724011,1.50801125280162,0.994782360205754,1.16978452271472,0,0,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0.31399745568275,0.616985819609003,204.552312690133,1.66845105716094,0.982794975566015,2.24862112384854,9.12870546248263,18.3294641411837,47.1057825795627,61.5669734144735,111.873306474774,118.061407670875,201.275489138296,154.06635233476,176.925360655956,194.233157141329,146.747084260924,288.983669296657,0.554259570499814,0,0,0,0,0,0.714130922658041,0.390267295715598,0.157635144106191,0,0.159454768657487,1.14704320301017,0.690739927463582,1.01254341007058,0,0,3.93411418415229,8.27810238914197,0.160550589987792,0.234423373184406,0,5.04941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,3.54850213020672,0.178065603667255,0.162886959353576,0.659880491890142,171.241228458552,0.242780636154981,2.11626489875326,8.86443874852721,3.54362271456927,14.1420168054207,8.01127708821486,9.81541069589265,10.3384239731569,48.9856974800515,108.581166832249,90.7592780584044,0,0,0,0,0,0,0,0,0,0,1.98475558249466,4.45192882941996,0.484393280087717,0.301564624640779,0.238744688006273,0.656563598980245,0.582961673259701,0.556275906031529,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,8.59203556213602,0,0.609958401380546,0.540026704109006,0,2.18362563746178,4.45052343069908,13.8031271061311,2.35580347785627,0.129614973291793,50.328484360041,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0,2.3436789271911,0,0.241584120826006,1.44015003128933,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,65.9785416320265,0,0,0,1.73870634628971,0.750729901804728,0.36630324853453,0.214368379079066,3.00943262421218,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,1.94485373654635,0.838452650511929,1.65459157605013,6.00066165064361,5.35691148821125,4.1719497246936,3.79045817645696,4.56262739802432,5.65879024158229,3.46473577638565,3.84150914429216,3.61843454420364,3.81034953026459,2.54945517078682,3.27945674788299,4.94503080963968,3.09117732282234,4.11443102862498,2.66213709239006,4.29185141905178,4.21504608233753,4.42314087952054,3.72304274723377,4.024415403201,3.94604567156764,4.34573164306758,6.17256498823512,2.37270036248348,2.75812550651578,3.27384834535751,3.40861050609125,3.08650577569826,0,5.38042699424439,7.95022899978704,0.191288332068843,2.64709702943419,3.47801753430632
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,1.15945795480671,170.363927642315,80.9165887112223,232.612075595899,342.432171994922,297.937879919728,68.6773214444267,0,0,0,0,0,0,0,0,0,0,140.674539813882,0.258937883647172,3.41416919849097,0,0.913396434936424,3.68984795609694,1.80867168663147,4.23319345688537,13.4463252722753,0,72.7334765307156,2.65383165584962,0,0.441683036920787,0,3.72783522436244,0.585561594023094,0,10.2182822083437,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,2.86136032403214,0.505445516867349,1.05220927943237,0,0,0,1.05493372485001,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.405344047729279,0.438599962275997,0.658650345873152,1.61047702512446,0,0,7.59963200862735,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,1.14135375667535,0,0.164698954724011,1.50801125280162,0.994782360205754,1.16978452271472,0,0,0.796565093017469,0,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.147610147979602,0.31399745568275,0.616985819609003,204.552312690133,1.66845105716094,0.982794975566015,2.24862112384854,9.12870546248263,18.3294641411837,47.1057825795627,61.5669734144735,111.873306474774,118.061407670875,201.275489138296,154.06635233476,176.925360655956,194.233157141329,146.747084260924,288.983669296657,0.554259570499814,0,0,0,0,0,0.714130922658041,0.390267295715598,0.157635144106191,0,0.159454768657487,1.14704320301017,0.690739927463582,1.01254341007058,0,0,3.93411418415229,8.27810238914197,0.160550589987792,0.234423373184406,0,5.04941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,3.54850213020672,0.178065603667255,0.162886959353576,0.659880491890142,171.241228458552,0.242780636154981,2.11626489875326,8.86443874852721,3.54362271456927,14.1420168054207,8.01127708821486,9.81541069589265,10.3384239731569,48.9856974800515,108.581166832249,90.7592780584044,0,0,0,0,0,0,0,0,0,0,1.98475558249466,4.45192882941996,0.484393280087717,0.301564624640779,0.238744688006273,0.656563598980245,0.582961673259701,0.556275906031529,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0,8.59203556213602,0,0.609958401380546,0.540026704109006,0,2.18362563746178,4.45052343069908,13.8031271061311,2.35580347785627,0.129614973291793,50.328484360041,1.69107881605257,0,0,0,0.129159823477731,0.168956125490778,0,2.3436789271911,0,0.241584120826006,1.44015003128933,1.26404448251271,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,65.9785416320265,0,0,0,1.73870634628971,0.750729901804728,0.36630324853453,0.214368379079066,3.00943262421218,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0.170733605754134,1.94485373654635,0.838452650511929,1.65459157605013,6.00066165064361,5.35691148821125,4.1719497246936,3.79045817645696,4.56262739802432,5.65879024158229,3.46473577638565,3.84150914429216,3.61843454420364,3.81034953026459,2.54945517078682,3.27945674788299,4.94503080963968,3.09117732282234,4.11443102862498,2.66213709239006,4.29185141905178,4.21504608233753,4.42314087952054,3.72304274723377,4.024415403201,3.94604567156764,4.34573164306758,6.17256498823512,2.37270036248348,2.75812550651578,3.27384834535751,3.40861050609125,3.08650577569826,0,5.38042699424439,7.95022899978704,0.191288332068843,2.64709702943419,3.47801753430632
|short_description=p2@Amy1
|short_description=p2@Amy1
}}
}}

Latest revision as of 08:37, 27 September 2015

Short description:p2@Amy1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Amy1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000106540, NM_007446, uc008rba.2_5end
EntrezGene:Amy1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Amy1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7170.36
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C8232.61
Mouse hepatocyte, donor6.CNhs13090.11822-124F4342.43
Mouse hepatocyte, donor8.CNhs13091.11824-124F6297.94
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6140.67
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H172.73
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B2204.55
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A347.11
liver, embryo E18.CNhs10579.499-43G461.57
liver, neonate N00.CNhs11117.641-24F4111.87
liver, neonate N03.CNhs11123.1345-25G2118.06
liver, neonate N06.CNhs11101.684-20A8201.28
liver, neonate N07.CNhs11103.716-20H2154.07
liver, neonate N10.CNhs11115.751-24B9176.93
liver, neonate N20.CNhs11220.823-25A3194.23
liver, neonate N25.CNhs11198.1368-26H1146.75
liver, neonate N30.CNhs11106.1382-42D1288.98
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H28.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E4171.24
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E58.86
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B648.99
pancreas, neonate N25.CNhs11094.1555-45E2108.58
pancreas, neonate N30.CNhs11182.1548-44H590.76
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A913.80
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C150.33
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B465.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland6.12e-2125
exocrine system6.12e-2125
digestive tract diverticulum3.55e-1923
sac3.55e-1923
liver1.23e-1822
epithelial sac1.23e-1822
digestive gland1.23e-1822
epithelium of foregut-midgut junction1.23e-1822
anatomical boundary1.23e-1822
hepatobiliary system1.23e-1822
foregut-midgut junction1.23e-1822
hepatic diverticulum1.23e-1822
liver primordium1.23e-1822
septum transversum1.23e-1822
liver bud1.23e-1822
trunk mesenchyme2.12e-1245
trunk region element6.47e-1179
endocrine system1.71e-1072
abdomen element4.00e-0949
abdominal segment element4.00e-0949
abdominal segment of trunk4.00e-0949
abdomen4.00e-0949
pancreas8.59e-0912
trunk1.50e-0890
mesenchyme2.85e-0761
entire embryonic mesenchyme2.85e-0761
gland3.22e-0765
epithelial tube8.29e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:113277676..113277692,-&oldid=4300956"