FFCP PHASE1:Mm9::chr4:129138905..129138933,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100383 | |EntrezGene=100383 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=D6RDT1,D6RDC8,Q80Y55 | |UniProt=D6RDT1,D6RDC8,Q80Y55 | ||
|association_with_transcript=0bp_to_ENSMUST00000131741,ENSMUST00000133083,ENSMUST00000149587,ENSMUST00000154368,NM_133889,uc008uxb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000131741,ENSMUST00000133083,ENSMUST00000149587,ENSMUST00000154368,NM_133889,uc008uxb.1_5end | ||
|cluster_id=chr4:129138905..129138933,+ | |||
|description=CAGE_peak_1_at_Bsdc1_5end | |description=CAGE_peak_1_at_Bsdc1_5end | ||
|id=chr4:129138905..129138933,+ | |id=chr4:129138905..129138933,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-11!51;UBERON:0002365!4.79e-09!25;UBERON:0002330!4.79e-09!25;UBERON:0009854!5.71e-08!23;UBERON:0009856!5.71e-08!23;UBERON:0002107!6.75e-08!22;UBERON:0007499!6.75e-08!22;UBERON:0006925!6.75e-08!22;UBERON:0009497!6.75e-08!22;UBERON:0000015!6.75e-08!22;UBERON:0002423!6.75e-08!22;UBERON:0006235!6.75e-08!22;UBERON:0008835!6.75e-08!22;UBERON:0003894!6.75e-08!22;UBERON:0004161!6.75e-08!22;UBERON:0008836!6.75e-08!22 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-11!51;UBERON:0002365!4.79e-09!25;UBERON:0002330!4.79e-09!25;UBERON:0009854!5.71e-08!23;UBERON:0009856!5.71e-08!23;UBERON:0002107!6.75e-08!22;UBERON:0007499!6.75e-08!22;UBERON:0006925!6.75e-08!22;UBERON:0009497!6.75e-08!22;UBERON:0000015!6.75e-08!22;UBERON:0002423!6.75e-08!22;UBERON:0006235!6.75e-08!22;UBERON:0008835!6.75e-08!22;UBERON:0003894!6.75e-08!22;UBERON:0004161!6.75e-08!22;UBERON:0008836!6.75e-08!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-11,51;UBERON:0002365,4.79e-09,25;UBERON:0002330,4.79e-09,25;UBERON:0009854,5.71e-08,23;UBERON:0009856,5.71e-08,23;UBERON:0002107,6.75e-08,22;UBERON:0007499,6.75e-08,22;UBERON:0006925,6.75e-08,22;UBERON:0009497,6.75e-08,22;UBERON:0000015,6.75e-08,22;UBERON:0002423,6.75e-08,22;UBERON:0006235,6.75e-08,22;UBERON:0008835,6.75e-08,22;UBERON:0003894,6.75e-08,22;UBERON:0004161,6.75e-08,22;UBERON:0008836,6.75e-08,22 | |||
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|phase1_expression=13.7728008510123,142.381966316859,131.494780183576,67.1470549101163,75.1343594919521,86.1220664907995,98.3509216907163,26.9867745992894,19.5696323790817,13.1076134740316,7.0199366972457,5.2649624936922,24.3105036502312,24.1280310676433,92.6045137847542,165.422293457488,235.752352929185,23.6596624018678,22.4867671113412,24.1902101524877,39.8002597907007,12.0142050953071,15.6719873483361,83.8360295437451,69.2816028822853,113.697928894774,115.444214970632,118.724649209925,31.1638407908453,20.9185007700743,40.3549529392655,3.81018404075779,10.4561013889377,15.8481681015439,9.24325183204079,6.64938581433969,10.6168065256432,27.6230876286359,21.8773896466664,19.3703785270305,37.0585837459539,33.4692287629638,34.4712350652119,7.93149953246137,10.5432008468295,9.17733760808408,22.6893489860931,23.7647420454687,38.4450819785326,30.9143539528111,16.2384249085421,23.0004102983955,36.2410429084711,50.0499877987828,44.7004752859477,17.2363822144084,16.9054729563866,14.4388185837684,27.5150386769053,20.1016572123373,27.2547503507657,21.0083609882862,20.4537803105562,24.7472422252385,19.7773272513395,24.8668040231135,20.6724076257699,38.806048837477,30.4847460186924,24.5710807763677,25.4493203235172,28.8507494247842,31.8050698970323,30.6226998037385,34.3126786245286,19.3035945188104,24.2254938198655,31.1557104927858,32.7181915835799,31.6527090552465,30.0994347451928,29.1711487511786,38.2480708631892,26.449842671489,33.3100180153446,18.2669722993674,23.7760706934502,22.927131836512,13.0249052533077,13.754023939435,45.5087247261634,34.4169550792555,31.2786813505565,34.0013010731825,33.7883737072788,46.5947962581229,43.9591035012383,6.98764322570037,8.05336614268893,8.83348936275851,12.1125341007945,21.815501160434,15.2883143823987,7.11066703153331,10.6080610095495,12.92135313923,13.1436355703844,38.2515997058851,25.8937883647172,29.9853120910946,16.8280766963152,14.0054120023585,25.8289356926786,22.3069508017881,38.6866846476469,37.3229776249136,43.2591193535154,30.3658649531814,70.7688441559899,29.9268672402707,70.0067613519447,61.094281895038,29.8226817948995,31.9131068742586,32.4642395560855,32.4430460114911,16.7741174308288,20.3966928537759,14.3589356592563,29.9581278809645,30.1950397860293,31.6648967324418,29.7239587528793,32.475863080952,31.3759947284936,39.1001443993296,22.7101781386205,53.2461834211198,29.0631172198726,40.1943944743165,11.5807194236806,13.7941262660084,21.4273934468366,17.7831685046144,20.342913246247,19.4732854832972,24.0813432118503,20.6962696591213,16.8143034487617,17.775971535775,19.3546236580344,18.8508329887714,13.6243152120543,23.3328951569852,16.4625709126355,14.131432944113,11.937624184325,15.6982223339976,16.76564646434,19.0555710732662,12.6644072389792,16.5657096544134,19.8865577891577,15.9379027715397,14.5011086114136,14.4171045745253,17.4377710909752,27.4398554562848,16.455984991348,20.685100473966,27.0769823883158,29.2399974850665,27.2242142960903,34.8936688776967,36.1698711530299,22.8448239482011,54.1886804093429,29.618463466317,15.7833305396073,16.7210403739516,13.9176858227861,17.3447831176075,22.0154263406422,19.9736907418187,31.3189180619378,26.8459296200138,25.6361912976275,23.0789507567735,27.6849003709151,18.8752075817387,29.6109128328331,32.8583100869706,17.2597789867304,14.738058126655,19.1603150644237,9.77526373657508,13.1887691273986,22.8642772842439,19.9827457312653,28.7839788560224,21.6658244421097,30.6024966526065,37.0565783858936,35.2043173060958,48.3535127978479,73.3050486374623,87.0269920756677,107.565013249578,88.6097964199341,89.4734987472021,79.6083963465424,30.476316863877,30.1913233707445,27.9105710751378,21.5305994449047,27.2785188182881,27.8065990958964,49.2092391790635,27.1587189544909,11.5589761179996,15.8076027148765,10.3544502322865,14.7854856421756,22.1108259823197,23.8043640886014,40.9780660501378,21.9112850307605,28.568944964692,35.3989586419621,29.6592599635486,32.8101465545202,32.5460381808401,39.2057338242108,14.6854534631052,35.4070276573706,35.043966780701,30.5046120976805,33.1709073055935,9.83609672260053,25.752034574846,17.0374438484779,16.7888660047555,14.8642144435631,17.6836910484888,20.2746793414979,19.5322806244294,19.4309136803949,20.7501659117031,18.9738133414331,44.984984299053,21.7168330368651,22.2582004584069,22.4784003907935,39.9227697593536,37.1686387351896,10.6823479908192,11.7906187216253,15.2770114602277,26.2818684663888,26.4394227231778,27.6518273689997,14.9048829085777,18.8943610543902,20.2263525078922,30.5713964867496,34.0347292719017,37.4483566329167,15.4852540866927,21.4735415079372,20.3620183280013,28.551777616406,26.5769538227085,25.6696472139309,31.6643547079183,26.9872464273267,39.8244293223982,38.1514128635084,26.8764592294612,24.0581995776899,18.8176325775846,21.9645112965771,18.2196398717018,25.6503136234269,41.3498423483437,86.4606656837135,17.7492706448371,34.8165711455058,129.409129962223,81.0596770385679,134.292787672229,18.6976272993241,16.5142713741916,18.6569964635972,31.5041303944987,13.1279437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| ||
|short_description=p1@Bsdc1 | |short_description=p1@Bsdc1 | ||
}} | }} |
Latest revision as of 09:24, 26 September 2015
Short description: | p1@Bsdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bsdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000131741, ENSMUST00000133083, ENSMUST00000149587, ENSMUST00000154368, NM_133889, uc008uxb.1_5end |
EntrezGene: | Bsdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-11 | 51 |
exocrine gland | 4.79e-09 | 25 |
exocrine system | 4.79e-09 | 25 |
digestive tract diverticulum | 5.71e-08 | 23 |
sac | 5.71e-08 | 23 |
liver | 6.75e-08 | 22 |
epithelial sac | 6.75e-08 | 22 |
digestive gland | 6.75e-08 | 22 |
epithelium of foregut-midgut junction | 6.75e-08 | 22 |
anatomical boundary | 6.75e-08 | 22 |
hepatobiliary system | 6.75e-08 | 22 |
foregut-midgut junction | 6.75e-08 | 22 |
hepatic diverticulum | 6.75e-08 | 22 |
liver primordium | 6.75e-08 | 22 |
septum transversum | 6.75e-08 | 22 |
liver bud | 6.75e-08 | 22 |