FFCP PHASE1:Hg19::chr15:39178921..39178952,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39178921..39178952,- | |||
|description=CAGE_peak_at_chr15:39178921..39178952,- | |description=CAGE_peak_at_chr15:39178921..39178952,- | ||
|id=chr15:39178921..39178952,- | |id=chr15:39178921..39178952,- | ||
|ontology_enrichment_celltype=CL:0000055!1.07e-35!180;CL:0000057!1.16e-31!75;CL:0000222!1.60e-17!119;CL:0000548!2.85e-17!679;CL:0000004!2.85e-17!679;CL:0000255!2.85e-17!679;CL:0000012!7.83e-17!682;CL:0000144!5.73e-14!625;CL:0002371!6.44e-14!591;CL:0000183!2.20e-13!59;CL:0000048!6.63e-13!430;CL:0000680!9.86e-13!57;CL:0000056!9.86e-13!57;CL:0000355!9.86e-13!57;CL:0000723!4.69e-12!436;CL:0000187!4.95e-12!54;CL:0002620!1.06e-11!23;CL:0000003!2.12e-11!722;CL:0000034!5.58e-11!444;CL:0000393!1.45e-09!60;CL:0000211!1.45e-09!60;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42;CL:0002334!1.14e-07!12;CL:0000220!3.88e-07!246;CL:0002321!6.90e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.07e-35!180;CL:0000057!1.16e-31!75;CL:0000222!1.60e-17!119;CL:0000548!2.85e-17!679;CL:0000004!2.85e-17!679;CL:0000255!2.85e-17!679;CL:0000012!7.83e-17!682;CL:0000144!5.73e-14!625;CL:0002371!6.44e-14!591;CL:0000183!2.20e-13!59;CL:0000048!6.63e-13!430;CL:0000680!9.86e-13!57;CL:0000056!9.86e-13!57;CL:0000355!9.86e-13!57;CL:0000723!4.69e-12!436;CL:0000187!4.95e-12!54;CL:0002620!1.06e-11!23;CL:0000003!2.12e-11!722;CL:0000034!5.58e-11!444;CL:0000393!1.45e-09!60;CL:0000211!1.45e-09!60;CL:0000192!2.70e-08!42;CL:0000514!2.70e-08!42;CL:0002334!1.14e-07!12;CL:0000220!3.88e-07!246;CL:0002321!6.90e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.02e-11;23!CL:0000057;1.78e-10;73!CL:0002334;5.04e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.40e-28,76;CL:0002620,5.33e-11,23;CL:0002334,7.30e-08,12;CL:0000048,4.97e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.56e-15!83;UBERON:0002329!3.56e-15!83;UBERON:0003077!3.56e-15!83;UBERON:0003059!3.56e-15!83;UBERON:0007282!3.56e-15!83;UBERON:0009618!3.56e-15!83;UBERON:0007285!3.56e-15!83;UBERON:0004290!2.21e-12!70;UBERON:0002049!1.00e-11!79;UBERON:0007798!1.00e-11!79;UBERON:0000490!1.10e-11!138;UBERON:0005256!4.80e-11!143;UBERON:0001134!5.31e-11!61;UBERON:0002036!5.31e-11!61;UBERON:0003082!5.31e-11!61;UBERON:0002385!3.11e-10!63;UBERON:0001015!3.11e-10!63;UBERON:0000383!3.11e-10!63;UBERON:0000486!3.32e-10!82;UBERON:0004535!6.20e-10!110;UBERON:0001737!7.74e-10!9;UBERON:0001009!3.31e-09!113;UBERON:0000055!3.80e-09!69;UBERON:0002100!2.62e-08!216;UBERON:0004872!2.86e-08!84;UBERON:0003104!2.96e-08!238;UBERON:0009142!2.96e-08!238;UBERON:0003914!3.15e-08!118;UBERON:0001981!5.07e-08!60;UBERON:0007500!5.07e-08!60;UBERON:0004537!5.07e-08!60;UBERON:0006965!5.07e-08!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.74e-15;9!UBERON:0001557;1.74e-15;9!UBERON:0003104;2.79e-07;7!UBERON:0009142;2.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.04e-15,9;UBERON:0001557,3.12e-07,19;UBERON:0002097,5.01e-07,41 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,2.00146596706261,0,0,0,0,0,1.96587149201207,0,0,0,0.123766352960047,2.31978163009541,2.6893005858071,0,0.730310090387373,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,1.79007586580942,0.361439152384566,0.50133791063589,1.01392563272577,0,0,0,0.443458794925128,0,0,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0.56530794192401,1.67799774483962,1.10047216776027,0.417989933073621,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0.24406205754817,4.41195696415042,0,0.625098097988558,0.44905874525234,0.788280363383256,7.66583187329416,0,4.03043836646896,0,0,0,4.96971951695318,1.01304409331664,1.85372853138506,0.573673241497627,0,0.560677600142307,0,3.20667812942308,4.35695449559673,3.09834545760283,6.37501422142489,3.93529311876822,10.37116664064,0.234321431833797,0.624320153660641,0,0.597794722207204,0.352303495931295,0.647491777472526,0.280901613404497,1.42907919878425,0.61417158655884,0.413303124703062,1.18800285728205,1.7308685049499,2.73048408581408,11.4978902690598,0.336672227908132,0.625592599359821,0.277064115484183,1.75591048352335,3.98434134538726,3.30523729594513,1.36118619792025,2.87023417102179,4.27114777637135,2.7551147150743,0.900273288253207,1.64884046781502,3.60696756063881,2.60563598864226,1.0126579934476,2.33848812386877,3.78650661366172,3.49789614840738,3.39456719319505,1.42003837006646,1.0075209822764,2.88253006927829,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.78620756819187,2.16563844500876,7.92655560266954,6.57480291304597,4.09718750801919,7.16910822760561,6.10062443458737,6.64357733511071,5.39325232640658,7.2601942096378,6.15595451114225,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.112131084345361,0,0.07333828582095,1.55126058909333,3.57656445851882,0,1.59562869950922,7.28052058379563,0.514414748524284,0,0,0.428933980974443,0,5.76268235746538,0,0.355391948742546,2.37585561880029,0,0,0.299918973546171,0,0,0,2.39624855491583,3.44585807502342,1.42636905040718,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,2.50085260529839,0.542530047399471,6.86303843051664,7.49401752948079,9.77754973210395,6.91134348457008,0.300946099727719,2.27407504055985,3.10419213877515,1.32845119707087,0.921845842708516,1.82455590382974,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.47350930946288,0.306923946576125,1.96462066103151,1.28139149255701,2.04682899626681,1.12597744800525,4.45254199334973,0.154209693802656,1.59805552781814,0.574890092096664,1.03850885836724,2.09178681227927,0,0,0,1.49258782613989,1.27463817604702,1.18011973463482,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,1.38153307253517,0.964856007391714,4.83391101907231,3.91545073568417,0.596586391912706,0.267096106940212,0,0,0,0,0.929691098594572,0.94443704049192,0,0,0,0,0.18532421910392,1.28812398067792,0,1.89827654831236,0.953150969619124,0.255897791311334,0.42793898803392,0.95460974377781,0,2.69808686374972,3.0199073270966,1.53156123049392,0.404364963146632,0,0.421258456238981,0.975267478179181,0.487426979262569,0,2.32049849393576,7.7772987574542,0,0.551365343546124,3.3171948762061,1.31535265576129,1.15755106853338,0,0.608731130888112,0.6196469961995,2.81695602532241,2.29458163526482,0.294747123039363,2.1400263088875,0.354761064070598,1.68886108238131,0.987884678879706,1.89736586882858,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44879151050393,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0.569710279235006,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,1.38674673013139,0,0,0,0,0,1.25783230675811,0.511625219603299,0.656923656425674,0,0,0,0.685209623233754,0.596143835108969,0,0.586654148204409,0.160317640503067,0,1.39866726707491,0,0,0,0,0,0.235694034616795,0,0,2.65195365854437,0.288950589901519,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,5.04419836959365,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,1.72844298240254,0,0,0,4.94125263177723,1.35974509824151,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,0,1.10961172300523,0.757612021100357,0.50313580350515,0,0.228840068396924,0.453692771289717,0.466311601748341,0.295710299979268,1.75226443880073,0,1.39736661188633,0,1.06336685823198,1.5652351854352,0.450772826991655,0.761610424337591,0.813741466409323,3.63697318405119,0.214821114084977,1.85613503951397,1.59238355479446,1.20008329398946,0.343395705182793,1.01024846629776,1.26184898228651,0.192619830407303,0,1.30497145982606,1.81364740409818,3.24131464053368,0.734210113519403,2.32815493405934,0,0.219284049578707,0.530067437837643,0,0,0.76872455576384,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0,0,0,0,2.27006381426734,0,0,0,0.255788742607303,0,0,0,0,0,0,0,3.4980478571876,0,0,1.41070377476274,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0.690359926060101,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.342976018874837,0,0,0.354581522651905,0,0.078493092850514,0,0,0,2.15927591218621,0.47775168788705,0,0,0,0,5.61197955311177,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,1.48798007266701,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,13.5150597600858,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,2.00146596706261,0,0,0,0,0,1.96587149201207,0,0,0,0.123766352960047,2.31978163009541,2.6893005858071,0,0.730310090387373,0,0.492484232307152,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,1.79007586580942,0.361439152384566,0.50133791063589,1.01392563272577,0,0,0,0.443458794925128,0,0,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0.56530794192401,1.67799774483962,1.10047216776027,0.417989933073621,0,0.35576626268671,0,0.402829317109147,1.52054421143703,0.24406205754817,4.41195696415042,0,0.625098097988558,0.44905874525234,0.788280363383256,7.66583187329416,0,4.03043836646896,0,0,0,4.96971951695318,1.01304409331664,1.85372853138506,0.573673241497627,0,0.560677600142307,0,3.20667812942308,4.35695449559673,3.09834545760283,6.37501422142489,3.93529311876822,10.37116664064,0.234321431833797,0.624320153660641,0,0.597794722207204,0.352303495931295,0.647491777472526,0.280901613404497,1.42907919878425,0.61417158655884,0.413303124703062,1.18800285728205,1.7308685049499,2.73048408581408,11.4978902690598,0.336672227908132,0.625592599359821,0.277064115484183,1.75591048352335,3.98434134538726,3.30523729594513,1.36118619792025,2.87023417102179,4.27114777637135,2.7551147150743,0.900273288253207,1.64884046781502,3.60696756063881,2.60563598864226,1.0126579934476,2.33848812386877,3.78650661366172,3.49789614840738,3.39456719319505,1.42003837006646,1.0075209822764,2.88253006927829,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.78620756819187,2.16563844500876,7.92655560266954,6.57480291304597,4.09718750801919,7.16910822760561,6.10062443458737,6.64357733511071,5.39325232640658,7.2601942096378,6.15595451114225,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.112131084345361,0,0.07333828582095,1.55126058909333,3.57656445851882,0,1.59562869950922,7.28052058379563,0.514414748524284,0,0,0.428933980974443,0,5.76268235746538,0,0.355391948742546,2.37585561880029,0,0,0.299918973546171,0,0,0,2.39624855491583,3.44585807502342,1.42636905040718,0.144781306667579,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,2.50085260529839,0.542530047399471,6.86303843051664,7.49401752948079,9.77754973210395,6.91134348457008,0.300946099727719,2.27407504055985,3.10419213877515,1.32845119707087,0.921845842708516,1.82455590382974,0.195801157462741,0.343143423810856,0,0,0,0,0,0,3.47350930946288,0.306923946576125,1.96462066103151,1.28139149255701,2.04682899626681,1.12597744800525,4.45254199334973,0.154209693802656,1.59805552781814,0.574890092096664,1.03850885836724,2.09178681227927,0,0,0,1.49258782613989,1.27463817604702,1.18011973463482,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,1.38153307253517,0.964856007391714,4.83391101907231,3.91545073568417,0.596586391912706,0.267096106940212,0,0,0,0,0.929691098594572,0.94443704049192,0,0,0,0,0.18532421910392,1.28812398067792,0,1.89827654831236,0.953150969619124,0.255897791311334,0.42793898803392,0.95460974377781,0,2.69808686374972,3.0199073270966,1.53156123049392,0.404364963146632,0,0.421258456238981,0.975267478179181,0.487426979262569,0,2.32049849393576,7.7772987574542,0,0.551365343546124,3.3171948762061,1.31535265576129,1.15755106853338,0,0.608731130888112,0.6196469961995,2.81695602532241,2.29458163526482,0.294747123039363,2.1400263088875,0.354761064070598,1.68886108238131,0.987884678879706,1.89736586882858,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44879151050393,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0.569710279235006,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,1.38674673013139,0,0,0,0,0,1.25783230675811,0.511625219603299,0.656923656425674,0,0,0,0.685209623233754,0.596143835108969,0,0.586654148204409,0.160317640503067,0,1.39866726707491,0,0,0,0,0,0.235694034616795,0,0,2.65195365854437,0.288950589901519,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0,5.04419836959365,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,1.72844298240254,0,0,0,4.94125263177723,1.35974509824151,0,0,0,0,0.342173675768659,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,0,1.10961172300523,0.757612021100357,0.50313580350515,0,0.228840068396924,0.453692771289717,0.466311601748341,0.295710299979268,1.75226443880073,0,1.39736661188633,0,1.06336685823198,1.5652351854352,0.450772826991655,0.761610424337591,0.813741466409323,3.63697318405119,0.214821114084977,1.85613503951397,1.59238355479446,1.20008329398946,0.343395705182793,1.01024846629776,1.26184898228651,0.192619830407303,0,1.30497145982606,1.81364740409818,3.24131464053368,0.734210113519403,2.32815493405934,0,0.219284049578707,0.530067437837643,0,0,0.76872455576384,0.690860683462397,0,0,0,0,0,0.655219697692825,0,0,0,0,0,2.27006381426734,0,0,0,0.255788742607303,0,0,0,0,0,0,0,3.4980478571876,0,0,1.41070377476274,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0.690359926060101,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.342976018874837,0,0,0.354581522651905,0,0.078493092850514,0,0,0,2.15927591218621,0.47775168788705,0,0,0,0,5.61197955311177,0,0,0,0,0,0,0,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,1.48798007266701,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0.332660356546013,0,0.106727345877715,13.5150597600858,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr15:39178921..39178952,- | |short_description=p@chr15:39178921..39178952,- | ||
}} | }} |
Latest revision as of 01:08, 25 July 2015
Short description: | p@chr15:39178921..39178952, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39178921..39178952, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.40e-28 | 76 |
skin fibroblast | 5.33e-11 | 23 |
preadipocyte | 7.30e-08 | 12 |
multi fate stem cell | 4.97e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.04e-15 | 9 |
upper respiratory tract | 3.12e-07 | 19 |
skin of body | 5.01e-07 | 41 |